Oncorhynchus masou masou (cherry salmon): 135545634
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Entry
135545634 CDS
T10723
Name
(RefSeq) PDZ and LIM domain protein 3-like isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135545634
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omm04990
]
135545634
Domain-containing proteins not elsewhere classified [BR:
omm04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
135545634
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
135545634
NCBI-ProteinID:
XP_064829460
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All DBs
Position
9:18960357..18990901
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AA seq
347 aa
AA seq
DB search
MPQNVVLDGPAPWGFRLNGGKDFNQPLTITRVTPGSKASLANLCPGDIILAIEGVSTECM
THSEAQNKIKDPASQLGLKIERPETKMWSPQVTEDGKSNPFKLNLEAEQQDLGYFEHKFN
VRPKLFLPAGQSECPPLQGLMGNGHQTVVTLSPPDPTLSANSGTDQPLAPSAQYNSPINL
YSEANVSAAQQLAQVTSVEEQVPPSGKTLSSIKESHVYRMLQDDQDRPREPRQSGSFKAL
QEHVETDGAKPLITRSVRAPVTKPPTPAGSLQKLPLCDKCGNGIVGTVVKAREKFRHPGC
FVCSDCKVNLKQRGYVFVEGQLYCETHARARTIPPEGHDVITVYPTA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagaatgtggtcctggatgggccagccccctggggcttcaggctcaatggaggg
aaggacttcaaccagcccctgaccatcaccagggtgacgcctggcagcaaagcctcgctg
gccaacctgtgccccggtgacatcatcctggccatagagggtgtgagtacagagtgcatg
actcacagcgaggcccagaacaagatcaaagaccctgcctcccagctcggcctcaagatt
gagaggcctgagaccaaaatgtggtcaccccaagtcacagaggatgggaaatcaaaccca
ttcaagctcaatttagaggcagaacaacaagacctgggctactttgaacacaagtttaac
gtcaggcctaagctcttcttacctgcaggccaaagcgagtgccctcctctgcaaggcctg
atgggaaatggccatcagacggtggtcaccctctccccccctgaccctaccctgtctgct
aactccggcacagaccaacccctggcccccagtgctcagtataactcccccattaacctg
tactctgaggccaacgtctcggccgctcagcagctagctcaggtcacctcagtagaggaa
caggtccctccaagtggtaagacactgtcctccatcaaggagtctcatgtgtaccggatg
ctccaggatgaccaggataggccacgtgaaccacgtcagtcaggctcctttaaggctctg
caggaacacgtggagactgatggagcaaagccgttgattactagaagtgtaagagctcca
gtgacaaagcctcctacacctgcgggatcgctacagaaactacccctctgtgacaagtgt
ggaaacggcatagtaggcacagtggtgaaggccagagaaaagttccgccaccctggatgt
ttcgtgtgctccgactgcaaagtcaacctgaagcagaggggctacgtctttgtggagggg
cagctgtactgcgagacccacgcccgcgcccggacgatacctccagagggacacgatgtc
atcaccgtttaccccacggcttga
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