Oncorhynchus masou masou (cherry salmon): 135545667
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Entry
135545667 CDS
T10723
Symbol
rnf4
Name
(RefSeq) RING finger protein 4
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135545667 (rnf4)
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135545667 (rnf4)
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135545667 (rnf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf_RING_Vps8
Prok-RING_4
zf-RING_4
RING_XB3-XBAT31
zf-rbx1
zf-C3HC4_4
TerY_C
zf-UDP
IBR_1
zf-RING_11
zf-Nse
zf-RING_10
Zn_ribbon_6
zf-RING_16
DZR
C5HCH
Rtf2
Motif
Other DBs
NCBI-GeneID:
135545667
NCBI-ProteinID:
XP_064829515
LinkDB
All DBs
Position
9:complement(19879099..19882562)
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AA seq
188 aa
AA seq
DB search
MSSTTQRKRRTGAPSSSRRTAKSSRVTTTMPLRAASAAETTAVLESSRTSSEEVVDLTCE
GSESTVVDLTNNDSVVVVDEGLQGRRGLGGESYVLSSDEEGDANGSLSADLLSSLQASSR
ARSTPGTVSCPVCMDSYAEIIESGRLVVSTKCGHLFCSQCLRDSLSRSHTCPTCRKKLTH
RQYHPIYI
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtacaacacagaggaagagaaggactggagccccctcaagttccagacgcaca
gccaagagtagcagagtcaccaccactatgccacttcgtgcagcatctgctgctgagacc
actgctgtgctggagagcagtaggactagcagtgaggaggtggtggacttgacatgtgaa
ggttctgagtcaactgtggttgacttgaccaacaatgattctgtggtggttgtcgatgaa
gggcttcagggcagacgtggacttggcggtgagagttacgtgctgagcagtgatgaggag
ggggatgccaatgggagcctcagtgctgaccttctatcttctctacaggccagcagtaga
gccaggtctacgccaggtacagtcagctgcccagtgtgtatggactcctatgctgagatc
attgaaagtggcagactagtggtctctacaaaatgtggtcaccttttctgcagtcagtgc
ctccgcgactcactgtcgagatcccacacttgcccaacctgcagaaagaaactgacccac
aggcaataccaccctatatacatctga
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