KEGG   Oncorhynchus masou masou (cherry salmon): 135545717
Entry
135545717         CDS       T10723                                 
Symbol
rack1
Name
(RefSeq) small ribosomal subunit protein RACK1
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Pathway
omm03010  Ribosome
Brite
KEGG Orthology (KO) [BR:omm00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    135545717 (rack1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omm03019]
    135545717 (rack1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:omm04147]
    135545717 (rack1)
Messenger RNA biogenesis [BR:omm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     135545717 (rack1)
Exosome [BR:omm04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   135545717 (rack1)
  Exosomal proteins of colorectal cancer cells
   135545717 (rack1)
  Exosomal proteins of bladder cancer cells
   135545717 (rack1)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_Gbeta WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_EIPR1 DSE1_N TRM82_WD Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_VPS8 ANAPC4_WD40 Beta-prop_Aladin Beta-prop_TEP1_C ASA1 Beta-prop_DCAF12 CFAP251_N Beta-prop_WDR41 Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_NOL10_N PAC11 Beta-prop_DCAF4 Beta-prop_IFT140_1st eIF2A Beta-prop_NWD2_C Beta-prop_ACSF4 Beta-prop_Vps41 Beta-prop_WDR75_2nd Beta-prop_NUP159_NUP214 Tricorn_2nd Cytochrom_D1 Beta-prop_pof12 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 135545717
NCBI-ProteinID: XP_064829598
LinkDB
Position
9:complement(24936510..24940381)
AA seq 317 aa
MTEQMTVRGTLKGHNGWVTQIATTPQFPDMILSASRDKSIIMWKLTRDETNYGIPQRALK
GHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQI
VSGSRDKTIKLWNTLGVCKYTIQDESHSEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLA
NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDSGDNINALC
FSPNRYWLCAATGPSIKIWDLEGKIIVDELRQEVISTNSKAEPPQCTSLAWSADGQTLFA
GYTDNLIRVWQVTIGTR
NT seq 954 nt   +upstreamnt  +downstreamnt
atgaccgagcagatgacagtaagggggaccctaaaggggcataatggttgggtcacccag
atcgccactacccctcagtttcctgatatgattctgtctgcatcccgagacaagtctatc
atcatgtggaagttgacccgtgatgagaccaactatggcatcccccaacgcgccctaaag
ggacactctcactttgtgagtgacgttgtcatctcctcggacggacagttcgctctgtct
gggtcctgggatggaacactccgtctgtgggacctcaccactggtaccaccacccgccgc
tttgtgggtcacaccaaggatgtcctgagcgtggctttctctgctgacaaccgccagatt
gtgtctggttcccgggacaagaccatcaagctgtggaacacccttggggtctgcaagtac
accatccaggatgagagtcactctgagtgggtgtcctgcgtgcgcttctcccccaacagc
agcaaccccatcattgtatcctgtggttgggacaagatggtcaaggtgtggaacctggct
aactgcaagctgaagactaaccacattggccacactggctacctgaacacagtgaccgtc
tctcccgatggttccctctgcgcttctggtggaaaggacggtcaggccatgctgtgggac
ctcaatgagggcaagcacctgtacaccctagatagtggtgacaacatcaacgccctctgc
ttcagccccaaccgatactggctctgcgccgccaccggcccaagcatcaagatctgggat
ctggagggtaagatcattgtggatgagctaagacaggaggtgatcagcaccaacagcaag
gccgagcccccacagtgcacctctctggcctggtctgctgatggacagaccctgtttgct
ggctacaccgataacctgatccgagtgtggcaggttaccatcggaacccgataa

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