Oncorhynchus masou masou (cherry salmon): 135545760
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Entry
135545760 CDS
T10723
Symbol
utp15
Name
(RefSeq) LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
135545760 (utp15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
omm03009
]
135545760 (utp15)
Ribosome biogenesis [BR:
omm03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
135545760 (utp15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40
WD40_Prp19
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_EML
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_IFT122_2nd
Beta-prop_WDR19_1st
Beta-prop_NWD2_C
KNTC1_N
WD40_like
Motif
Other DBs
NCBI-GeneID:
135545760
NCBI-ProteinID:
XP_064829677
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Position
1:complement(48756652..48769257)
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AA seq
588 aa
AA seq
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MASFKSTKIPIYPKLGEKVTPDTLYWKNYKAPVQIKEFGAVTSIDFSSLAPHNYAVTAST
RIHIYRPFSTEPVKTFTRFKDTAYSGKFRSDGQLLVAGCEDSVVRLFDVSGKVALRVFKG
HTKGVHVTDFTSDCYHILTGSDDYTCRLWDIPNSTELTSYKEHTDYIRCGITSKLNRDIF
ITGSYDHTLRVFDARVEKSVMTMDHSQPVERVLLYPSEGLLVSAGGRYVKVWDLLKGGQP
LVSLKNHHKTVTCLSLSSNGQRLLSASLDRHVKIYNTTNYKVVHNFDYAASILSLALAPD
DESIVVGMTNGVLSIKHRKSPEEKREMAGKQRMQPVYRIFVKGRNYVPKKDDFLVSKPVK
SHLAKYDKQLKKFNISKALDTALESWRRNRKPEITVAVMKELDRRGTLKNALAGRDEQNL
SQLLNFLIGNVVDPRFTPVLVTATEMILDIYQAVVGQSSVVDRQLVRLQELVEREVDYQQ
DLLEVLGMLDTLFAASLPRKEVPCPGSSRPNGLAEGSLGAPGPQLXRPPEAPTKRLFHRG
TRVPGLPPSRLVPEVLLGLRRNVVRLREPMTTSCYLNLNHQLKNGFAQ
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcttcattcaaatccacaaaaatcccaatatatcccaaacttggagagaaagttact
ccggacacattgtattggaaaaactacaaggccccagtccagataaaggaatttggagca
gtcacaagcattgacttctcctccctggcaccacacaactatgcagtgactgcttctaca
cggatccacatctacagaccgttttctacggagccagtcaagacatttactcgcttcaag
gacacggcgtacagcggaaagttccggtcagatggtcagctcttggtggcaggatgcgag
gactccgtggtgcggctctttgatgtcagcggcaaggtggcgctcagggtgttcaaaggg
cacacaaagggggtgcatgtaacagatttcacctcagactgttatcacatcctgacgggc
tcagacgactacacttgtcgcctgtgggacatccccaattccactgaactgacctcatac
aaggaacacacagactatatccgctgtggcatcaccagcaaactcaacagagatatcttc
ataacaggctcctatgaccacacactaagggtgtttgatgccagagtggaaaagagtgtg
atgaccatggaccacagccagcccgtggagagagttctgctctacccctctgaaggacta
ctggtttcagcaggagggcgctatgtgaaggtgtgggacctgctgaagggaggtcagcct
ctggtgtcactgaagaaccaccacaagaccgtcacctgcctcagtctcagcagcaacgga
cagagactgctctctgcctccctcgacaggcacgtgaaaatctacaacacaaccaactac
aaggtggttcataactttgactacgccgcctccattctcagtctggccctggctcctgat
gacgagtccattgtcgttgggatgaccaatggcgtcctgagcatcaaacataggaagagc
cctgaggagaaacgggaaatggctggaaaacagagaatgcagccagtgtaccgcatcttt
gtcaaaggaagaaactacgtcccaaaaaaggatgactttcttgtcagcaaaccagtgaag
agccatctggccaaatacgacaaacagctgaagaaattcaacatctccaaggccttggat
accgccctggagtcgtggcggaggaacagaaagcctgagatcacggtggcggtgatgaag
gagttggatcgccgaggaactttgaagaacgctctggccggacgagacgagcagaacctc
tctcaactcctcaatttcctgattgggaatgtagttgatcccaggtttacacctgtcctc
gtcaccgccactgagatgattcttgacatctaccaggcagtggtgggtcagtcttcagta
gtggacaggcagcttgtacgtctccaggagctagtggagagagaggttgactaccagcag
gacctcctggaagttctggggatgttggatactctattcgccgcatccctccccaggaaa
gaggtgccttgcccaggcagcagccggcctaacggcttggcagaggggagtttgggggct
ccgggaccacagctcnncaggccgcctgaggcccctacaaaaagactattccaccggggt
accagagtgcctgggctgcccccgtcacgactggttccggaagtgcttctcggtcttcga
cggaacgtcgtcagacttcgagaacccatgactacatcctgctatctgaatttaaaccac
caactaaaaaatggatttgcgcaataa
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