Oncorhynchus masou masou (cherry salmon): 135545784
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Entry
135545784 CDS
T10723
Name
(RefSeq) F-box and WD repeat domain-containing 11-B isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04114
Oocyte meiosis
omm04120
Ubiquitin mediated proteolysis
omm04218
Cellular senescence
omm04310
Wnt signaling pathway
omm04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135545784
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
135545784
04340 Hedgehog signaling pathway
135545784
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
135545784
04218 Cellular senescence
135545784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135545784
03036 Chromosome and associated proteins [BR:
omm03036
]
135545784
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
135545784
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
135545784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
Beta-prop_TEP1_C
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-TrCP_D
Beta-prop_WDR75_1st
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
ANAPC4_WD40
F-box-like
Beta-prop_IP5PC_F
WDR90_beta-prop_4th
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_DCAF4
NBCH_WD40
WD40_like
Beta-prop_IFT140_1st
F-box
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_VPS8
WD40_RFWD3
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
PEP5_VPS11_N
WD40_2
DUF1513
Motif
Other DBs
NCBI-GeneID:
135545784
NCBI-ProteinID:
XP_064829735
LinkDB
All DBs
Position
9:complement(28500545..28515256)
Genome browser
AA seq
529 aa
AA seq
DB search
MEPEMEDNTLELMNTSVMESQNHVDDLSPKRTTILTKLSNGPVMTGSRKRPSEGNCDKEK
EQCIALFDQWSETDQVEFVEHLISHMCHYQHGHINSYLKPMLQRDFITALPAQGLDHIAE
NILSFLDAQSLCSAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERHQWEKYLFK
NRTTEVPPNSYYHSLYPKIIQDIETIEANWRCGRHNLQRIQCRSENSKGVYCLQYDDDKI
ISGLRDNSIKIWDKQSLECLKILTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVTSGEVL
NTLIHHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDD
KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECG
ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSG
RVFRLQFDEFQIISSSHDDTILIWDFLNVSTNGQSEGRSPSRTYTYISR
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggagccggagatggaggacaacacgttggaattaatgaacacgtcagtcatggagtcc
cagaaccacgtagacgacctctccccaaagagaaccacaattctcaccaagcttagtaat
ggtcctgtaatgacaggctctcgtaagcgtccgtcagaggggaactgtgacaaggagaag
gagcagtgcatcgccctgtttgaccagtggtctgagactgaccaggtggagtttgtagaa
cacctcatctcccatatgtgccactaccaacacggccacatcaactcctacctcaaaccc
atgcttcaacgtgacttcatcacagcactgccagcccagggtctggaccacatagcagag
aacatcctgtcgttcctggacgcacagtctctgtgctccgcggagctggtgtgtaaggag
tggcagagggtgatctcagagggcatgctctggaagaaactcatagaacgcatggtgcgc
acagaccccctctggaaaggcctgtcagagaggcaccagtgggagaagtatctgttcaag
aaccgaacgacagaagtcccgcccaactcctactaccactccctctaccccaagatcatc
caggacatagagactattgaggctaactggcggtgtggcagacacaacctacagaggatc
cagtgtcggtcagagaacagtaaaggagtctattgcctccagtacgacgacgataagatc
atcagtggccttagagacaactccataaagatctgggacaagcagtctctggagtgtctg
aagatcctgacaggtcatacaggctctgtgctctgtctgcagtatgatgagagagtcatt
gtcactggctcctccgactccactgtcagggtgtgggacgtgacgtcaggtgaagtactg
aacactctgatccatcacaacgaggcggtgctccacctgcgcttctgcaacggtctgatg
gtgacgtgttccaaggaccgctccatcgccgtgtgggacatggcctcgcccaccgacatc
agcctccggcgcgtcctcgtggggcaccgggccgccgtcaacgtggtcgacttcgacgac
aaatacattgtgtcggcgtctggagaccgcaccattaaggtgtggagcaccagtacgtgt
gagtttgtgcgcactctaaacggacacaagcgaggcatcgcctgcctgcagtacagagac
agactagtggtcagcggctcctcagacaacaccatacggttatgggatattgagtgtgga
gcgtgtttgcgggtgttggagggtcatgaggaactggtccgctgcattcgcttcgacaac
aagaggatcgtcagtggtgcctacgacggtaagatcaaggtgtgggatctgcaagctgct
ctggatccacgagccccagccagcaccttgtgcctgcgcacactggtggagcactcggga
cgtgtgttccggctgcagtttgacgagttccagatcatcagcagttcccatgacgacacc
atcctcatctgggacttcttgaatgtgtcgaccaatggccagtcagagggccggtccccc
tcacggacctacacctacatctccagatag
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integrated database retrieval system
