Oncorhynchus masou masou (cherry salmon): 135545901
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Entry
135545901 CDS
T10723
Name
(RefSeq) FACT complex subunit SSRP1-like
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135545901
03036 Chromosome and associated proteins [BR:
omm03036
]
135545901
Transcription factors [BR:
omm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
135545901
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
135545901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
135545901
NCBI-ProteinID:
XP_064829940
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All DBs
Position
9:complement(33849599..33862125)
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AA seq
709 aa
AA seq
DB search
MGDTLEFNEIYQESKGSWNDGRLRFSKQNVVYKSSKTGKVDNIPAAELSQATWRRVCLGH
GIKLATSTGHVYKYDGFRDTDYERISEFFKANYKVELTEKDMCVKGWNWGTAKFSGPLLS
FDVNDSSVFEIPLASVSQCATGKNEVTLEFHQNDDAEVSLMEVRFYVPPGPADEGADPVE
AFAANVLSKADVIQATGDAVCVFKELQCLTPRGRYDILIYPAFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEELRLTLNMSEEEVEKRYE
GKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGNTPGAQCITCSYKAQSGLLYPLERG
FIYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEVETKQGNQFTFSSIEREEYGKLFDFV
NAKKLNIKNRGFKEGMKSKNNEYSDSDEDQHDAYLERMKAEGKIREEGDGSNDSDEETDE
SFNPGEESDVAEEYDSNASESESGSGGDGSDDEGKKKKKPAKKAKVVKERKPRKEKKQKD
TNAPKRPMSSYMLWLNSSREHIKSENPGISITEISKKAGEMWKQIGKDDKEGWDRKAEEA
KKNYEKAMKEYRENGGGSSTPSKKESKKAGGKKEDKAGGKKRKSDGGEKEKEQGGNDSFK
SREFISSEESSSEGERKKAKKAKGKPKGKESEEEEEVVTTPPSSEEDSD
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacgcttgagttcaacgagatctaccaagaatccaaggggtcctggaacgac
ggtcgtctgaggttcagtaagcagaatgtggtgtataagagcagcaagacggggaaggtg
gacaacatcccggcagcagagctgtcccaggccacgtggaggcgtgtgtgcctgggacac
ggcatcaagctggccaccagcaccggacatgtctacaaatatgacggcttcagagacacg
gattatgagaggatctctgagttcttcaaggccaactacaaggtggagctgacagagaag
gacatgtgtgtgaagggctggaactggggcactgctaaattctctggtccattgttgtcg
tttgacgtgaatgacagctccgtgtttgagatccccctggccagtgtgtcccagtgtgcc
accgggaagaacgaggtgacgctggagttccaccagaacgatgacgctgaggtctctctc
atggaggtccgtttctacgtcccccccggccccgcagacgagggggcagaccccgtggag
gcgtttgccgcgaatgtgctgtctaaggcagatgtgatccaggctacaggagatgctgtg
tgtgtcttcaaagagctgcagtgcctcacacccaggggcaggtatgatatcctcatctac
cccgccttcctccacctccatggtaagacgtttgactacaagatcccctacaccaccgtg
ctgcgtctctttctgcttccacacaaggatcagagacagatgttctttgtgatcagtctg
gacccgcccatcaagcaggggcagacccgttaccacttcctcatcctgctcttctctaag
gaggaggagctccgcctcaccctcaacatgagcgaggaggaggtggagaagcgttatgaa
gggaagctcagtaagaacatgtcaggttctctctatgagatggtcagcagagtgatgaag
gctctggtcaacaggaagatcaccgtgcctggaaacttccaggggaacaccccaggggcc
cagtgtataacgtgttcctacaaggcacagtccggcttgctctacccgctggagaggggt
ttcatctacgtgcataagccgcccgtccacctgcgcttcgaggagatctcctgtgtcaac
ttcgccagaggcaccaccaccacgcgctcctttgacttcgaggtggagaccaagcagggg
aaccagttcaccttcagcagcatcgagagggaggagtacgggaagctgtttgactttgta
aacgccaagaaactcaacatcaagaatagaggattcaaggagggcatgaagagtaagaac
aacgagtacagtgactccgatgaagaccagcacgatgcctacctggagaggatgaaggct
gagggcaagatcagagaggagggcgacggcagcaacgactccgacgaagagaccgatgag
tctttcaaccctggggaggagagtgatgttgctgaggagtatgacagtaacgcgtcagag
agcgaaagcggcagcggaggtgatggcagcgatgacgagggaaagaagaagaagaagcct
gcaaagaaggccaaagtagtgaaggagaggaagccacgcaaagagaagaagcagaaggac
accaacgcccccaagaggccgatgagttcctacatgctgtggctcaactctagccgcgag
cacatcaagtcggaaaaccccggaatctcaatcacagagatctccaagaaggccggagag
atgtggaaacagatagggaaggacgacaaagaggggtgggacaggaaagcagaggaggct
aagaagaactatgagaaagccatgaaggaatacagagagaacggtggaggctcctctaca
ccctccaagaaggagagcaagaaggcaggaggcaagaaggaggacaaggcaggaggcaag
aagaggaagtctgacggaggagagaaagaaaaggagcaaggagggaacgacagttttaag
agccgagagtttatctccagcgaggagagttcgtctgagggcgaacggaagaaggccaag
aaagccaaaggcaaacccaagggcaaggagtctgaggaagaggaggaagtggtgaccacg
ccccccagctctgaggaggactctgactag
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