Oncorhynchus masou masou (cherry salmon): 135545925
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Entry
135545925 CDS
T10723
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm02010
ABC transporters
omm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
135545925
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
135545925
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omm02000
]
135545925
Transporters [BR:
omm02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
135545925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
SRP54
Motif
Other DBs
NCBI-GeneID:
135545925
NCBI-ProteinID:
XP_064829986
LinkDB
All DBs
Position
9:complement(34588186..34630153)
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AA seq
2299 aa
AA seq
DB search
MSISTQLGLLLWKNFTYRRRQTLQLLIEIVWPLLIFFILISVRLNYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRNPTPGESPGVVGNFNESIISRLFSDAKKILLYSQNDR
NLDGFKDLIQALKTLQANTEGFKLKDFLHDNETLSTFLLRNASFSEHAVHQIIEADVNLE
KVLVKGFGVHLRDMCKSNGTSVEDFVTITDSEVSSLVQEILCRSPGSWLNQAESHFLNNL
DFLKPIRKDVRADPEAVQQVAEATDNLLESLGSLAIELASMKSWSDLRNEIIFLTENATS
SPSHMYQAVSRIVCGHPEGGGLKIKSLNWYEDSNYKALFGNHNTTDGEETISAYDNTSTP
YCNAMMRSMESSPVSRMIWQALKPLLMGKILYTPATPATQKIIHEVNRTFQELGVLRELG
GMWEEVRPKVWTFLESSEQMDLVRTLLKNNGTARFFTSQLAGTEWTVEDVSNFLTKHSED
TRPHGTAFTWREVFNETDQAIMSISRFMECVNLDKMEPVANEERMVNKSMALLDDRKFWA
GIVFPDIEANSSELPAIVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFS
YLQDIIEHSIITVVTGVKEKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAI
IIKSVVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLISASLLVVLLKMGNLLPYSD
PSVIFLFLGSFAVVTIMQCFLISTMFARANLAAACGGIIYFTLYLPYVLCVAWQDYVGFG
AKIVASLLSPVAFGFGCEYFALFEEQGIGIQWNNLFNSPMEEDDFSLTTAIIMMYFDSFL
YMVMTWYIESVFPGQYGIPRPWYFLFTKSYWFGEGDNRKTDFSQNKRRNCEAVCIEEEPA
HLKPGVFIENLVKVYPHGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPT
SGTAYIMGKDIRSELSAIRQSLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEQVKSEIE
QILIDTGLPHKRTSKTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDL
LLHYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKG
PEPSLSSFHNSSSTVSFTKKEEDCPSESSSDAGLGSEHESEAATIETAPAASICESAFVA
PDVSLISSLIFKHVPAARMVEDLGHELTYILPYGAAKDGAFVELFKDMDDRLPDLGISSY
GVSDTTLEEIFLKVAEDNGVDTELPSDGTLPMPRRRIHHAFGGGNAFGGDHQSCLRPQID
DDNNEHNDSDAYPESRETDFLNGSDGKGSYQVKGWSLTRQQFVALIWKRFLYAQRSRKGF
FAQIVLPAVFVCVALVFSLIVPPFGKYPSLELQPWMYEEQSLFISDDAPEDANTQRLLSA
LTEGPGFGTRCMEGQPITDTHCTMGDEDWTIPEVPESLLELFRTGNWTMEEPSPTCACSC
DGRKKMLPECPTGAGGLPPPQMKISETDTLQNLTGRNISDYLVKTYAEIIGKSLNNKIFV
NEFRYGGFSLGARSTQVLPPAGEVDDAIARVRKIFELEKGAAADRFLESLSSFINGLDTK
NNVKIWFNNKGWHSMGAFLNVMNNGILRANLPPGQDPSKFGIRTFNHPLNLTKEQLSQVA
LMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHMQFISGVQPLLYWTANFIWDM
CNYIVPATLVIIIFVCFQQKAYVSSTNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAY
VVLTSVNILIGINGSISTFVMELFGNNEVGGINDILKNVLLIFPHFCLGRGLIDMVKNQA
MADALERFGENRFRSPLEWDMVGKNLFAMAVEGVVFFIITVLIQYRFCIKPINLHTKLPP
VGEEDEDVARERQRIVNGLGHGDILELRQLTKVYKRKQKPAVDRLCVGIPPGECFGLLGV
NGAGKTTTFKMLTGDSIVTSGEAFLAGKSILREIDEVHQNMGYCPQFDAINDLLTGREHL
EFYAVLRGVPEKEVCEVAEWGIRKLGLVKYVDKAAGSYSGGNMRKLSTAMALIGGPPVVF
LDEPTTGMDPKARRALWNCIHSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGS
VQHLKNRFGDGYTIILRVAGPDPDLPPVMKFIESKLPGSTLKEKHRNMLQYQLSSSLTSL
AHIFSILAKNKDLLRIEDYSVSQTTLDQVFVNFAKDQSDDYHSKDNSVKRKEAVVDITPL
SSRQAEEKLAEERLKESLV
NT seq
6900 nt
NT seq
+upstream
nt +downstream
nt
atgtccatctcaactcagctgggcttactgttgtggaagaactttacctacagaagaagg
caaacgctccaactgctgattgagatagtatggcccctgttgatcttcttcattttgata
tcagtgagactgaactaccctccgtacgaacaacatgagtgtcatttccccaacaaggcc
atgccctcggcaggcacccttccatggatccaaggcatcatctgcaacgccaacaacccc
tgcttccgcaaccccactcctggagagtcccctggggtcgtgggcaacttcaatgagtcc
ataatctctcgtttgttctcggatgccaagaagatcctgctgtacagtcagaatgaccgg
aatctggacggctttaaagacctcatccaagccctgaagaccctacaggccaacaccgaa
ggattcaagctgaaggatttcctccacgacaatgagaccctgtccactttcctcctgcga
aacgcctccttctcggaacacgccgtgcaccagatcattgaggccgacgtgaacttggaa
aaggtgctggtcaaaggcttcggtgtccacctgagggacatgtgcaaaagcaacggcacc
agtgtggaggactttgtgaccatcacagacagcgaggtgtccagtctggtccaggagatc
ctctgccggtctccaggctcctggctcaaccaagcagaaagccacttcctcaacaaccta
gacttcctcaaaccaatacggaaagatgtgagggctgaccctgaagctgtccagcaagtg
gctgaggctacagacaaccttctggagagcctggggtccctggccattgagctggccagc
atgaagagttggagcgacctgcgtaacgagatcatcttcctcacggagaacgccacgtcc
tcccccagccatatgtaccaggccgtgtcgcgcatcgtctgcggccaccccgagggcggc
ggactaaagatcaagtccctcaactggtacgaggacagcaactacaaggccctgttcggc
aaccacaacacaaccgacggggaggaaactatctctgcctacgacaacacatccactcca
tactgcaacgcaatgatgaggagcatggagtccagccccgtatccaggatgatctggcag
gccctgaagcctctgctcatgggcaagatcctgtacacccctgccactcccgccacacag
aagatcatccacgaggtgaacagaacgttccaggagctgggggtcctcagagagctgggg
ggcatgtgggaggaggtgaggcccaaagtctggaccttcctggagagtagcgaacagatg
gacctagtaaggaccctactgaagaacaatggcaccgccaggttcttcacctcccaactg
gcgggcacagagtggaccgtggaggatgtctccaacttcctgaccaaacattcagaggac
acacgtccccacggcaccgccttcacttggagggaagtcttcaacgagacggaccaggcc
atcatgagcatatcccgcttcatggagtgtgtaaacctggataagatggagcctgtggcc
aatgaggaaaggatggtcaacaaatccatggcactgctggacgataggaagttctgggcg
gggatcgtgtttcccgacattgaggccaacagctctgaactgccggccattgtcaactac
aagattcgcatggacattgataatgtggagcgcaccaacaagatcaaagacggatattgg
gaccccggtcctcgtgccgacccctttgaggacctgcgctacatctggggcggcttctct
tacctccaggacatcatcgaacacagcatcatcacggtagtaactggcgtcaaggagaag
acgggagtctacatccaacagatgccctatccctgctacgtggacgacatcttcctgcgg
gtgatgagtcgctccatgcccctcttcatgaccctggcctggatgtactctgtggccatc
atcatcaagagcgtggtttacgagaaggaggcgaggctcaaggagaccatgaggatcatg
ggattggacaacggcatcctgtggttcagctggttcatcagcagcctcatccccctactc
atctccgccagtctgctggtggtgctgcttaagatggggaacctgctgccctacagtgac
cccagtgtcatcttcctgtttctgggttccttcgctgtggtaaccatcatgcagtgcttc
ctcatcagcaccatgtttgcccgtgccaacctggcggcggcctgcgggggtatcatctat
ttcaccctctacctgccctacgtcctctgtgtggcttggcaggactacgtgggctttggg
gcaaaaatagtcgctagcctgctgtccccggtggcttttggctttggctgtgagtacttt
gccctgttcgaagagcagggcatcggcatccaatggaacaacctgttcaacagccccatg
gaggaggacgacttcagcctgaccaccgccatcatcatgatgtactttgactccttcctc
tacatggtgatgacctggtacatcgagtccgtcttccccggtcaatatggtattcccagg
ccctggtacttcctattcaccaagtcctactggtttggagaaggagacaacaggaagact
gacttcagtcagaacaagagaagaaactgtgaagctgtctgtatagaggaagagccagcc
cacctgaaacctggcgtcttcatagagaacctagtcaaggtgtacccgcacgggaagaag
ctggctgtggacgggctgactctgggcttctacgagggacagatcacctctttcttgggc
cacaacggagcagggaaaaccaccaccatgtcgattctaacgggactgtttccccctacc
tctggcactgcttacatcatgggcaaagacatccgatcggagctgagcgctattcgacag
agtctgggcgtttgtccacagcacaacgttctcttcagcatgctgaccgtcgaggagcac
atctggttttacgctcgtctgaagggtctatctgaggaacaggtgaagtctgagatcgaa
cagatcctgatagacactggtctgccgcacaaacgcacttccaagaccagcacactgtcc
ggagggatgcagaggaagctctctgtggccctggccttcgtcggggggtcaaaggttgtg
attctggacgagcccaccgctggggtcgacccctacgcccgccggggcatctgggacctc
ctgctccattatcgtcaaggtcgtaccatcatcctctccacccaccacatggatgaggcc
gacatattgggtgaccgcatcgccataatctcccatggcaagctttgctgcgtgggctcc
tccctcttcctgaagaaccagctaggtacaggctactatctgaccctggtcaagaagggc
ccagaaccttccctcagctccttccacaactcctccagcaccgtctccttcactaagaag
gaggaagattgtccctctgagagcagctctgacgcaggccttggcagcgaacacgagagc
gaagcggccaccatcgaaactgccccggctgcatccatctgtgaaagtgccttcgtggcc
cccgacgtctccctgatctccagcctgatcttcaagcatgtcccagccgcgcgcatggtg
gaagacctgggccatgagctcacttacatactgccctatggcgcagccaaggacggagcc
ttcgtggagctcttcaaggacatggacgaccgtctccccgacctaggcatctccagctac
ggcgtctccgacaccaccctggaagagattttcctgaaagtggcagaggacaatggagtt
gacactgaactcccctctgacggtaccctccccatgcccagacgtcgcatacatcatgct
tttggtggaggaaatgcctttggtggagaccaccagagctgccttagaccccagatagat
gacgacaacaatgaacataacgactcggacgcatacccagaatccagagagacagacttc
ctgaacggctcggacggtaaaggctcctaccaggtgaaaggctggagtctgacgaggcag
cagtttgtcgccttgatatggaagaggttcctgtatgctcaacgctccagaaaaggtttc
tttgctcagattgtgctccctgcggtgtttgtttgcgtcgccctggtcttcagtctaatt
gtcccgccctttggaaaataccccagtctggagctgcagccgtggatgtacgaagaacag
tccctcttcatcagtgatgacgcccctgaagatgccaacacacagcggttattaagtgcc
cttaccgaaggacctgggtttggaacgcgttgcatggaaggacagcctataactgacact
cactgtacgatgggcgacgaggactggaccataccagaggttccggagagccttctggaa
ctgttccgtacgggcaactggaccatggaggagccgtcccccacatgcgcctgcagctgt
gacggccgcaaaaaaatgctccctgagtgtcctactggagccggaggactgccaccaccc
cagatgaagatcagcgagacagacaccctgcaaaacctgactggcagaaacatctctgac
tacctagtaaagacctatgcagagatcattgggaaaagtttgaacaacaagatctttgtg
aatgaatttaggtacggcggcttctcattgggcgccaggagcactcaggtcctcccccca
gctggcgaggttgatgatgctatcgctcgagtgagaaagatttttgagttggagaagggt
gctgccgcagaccgattcctggagagcttgtctagcttcatcaatggtctggacaccaag
aacaatgtcaagatttggttcaacaacaaggggtggcacagcatgggagcctttctcaac
gtgatgaacaacggcatcctgcgcgccaacctgccccctggccaggaccccagcaagttt
ggcattcgcaccttcaaccacccactcaacctcaccaaggagcagctgtcccaggtggca
ctgatgaccacctcagtggacgtgctggtgtccatctgcgtgatcttcgccatgtccttc
gtcccagccagcttcgtagtcttcctcatccaggagagagtgagcaaggccaagcacatg
cagttcatcagcggcgtgcagcccctgctctactggacggccaacttcatctgggatatg
tgtaactacatcgtcccggcgacactcgtcatcatcatctttgtctgcttccaacaaaag
gcctatgtgtcgtccaccaacctgccagtgctggccctgctgctgctcctctatggctgg
tctatcactcctctgatgtacccagcgtccttcttctttaagatccccagcacggcctac
gtggtgctcacctccgtcaacatcctcatcggcatcaacggcagcatctccacctttgtc
atggagctctttggaaacaacgaggttggaggtatcaatgacatcctgaagaacgttttg
ctgatatttcctcacttctgtttgggtcgaggcctcatcgacatggtgaagaaccaggcc
atggccgacgctctggaaagattcggtgagaaccgcttccgatcccctctggaatgggac
atggtgggcaagaacctgtttgccatggccgtggaaggagtggtcttcttcatcatcacc
gtcctcatccagtaccgcttctgcatcaagcccattaacctgcacaccaagctccctccg
gtaggcgaggaggacgaggacgtggccagagagaggcagaggatcgtcaacggactggga
cacggagacatcctggagctccgacagctcaccaaggtctacaagaggaagcagaagccg
gcggtggaccgcctgtgtgtgggcatccctcctggagagtgctttgggctcttgggtgtg
aacggagctggaaagaccaccactttcaaaatgctgacaggagactccatagtcaccagt
ggagaggctttcctggccggaaaaagtatactgcgggagatagacgaggtgcaccagaac
atgggctactgccctcagtttgacgccatcaacgacctactgacaggaagagagcacctg
gagttctatgccgtcctgcgcggcgtgcccgagaaggaagtttgcgaagttgccgaatgg
ggcatccgtaagctgggcctagtaaagtatgtggataaggcagcgggaagctacagcgga
ggaaacatgaggaaactctccaccgccatggccctgataggaggaccacccgtcgtgttc
ctggacgagcccaccactgggatggaccccaaagcacgcagggccttatggaactgcatc
cacagcgtcatcaaggagggacgctccgtggtgctcacctcgcacagtatggaggaatgt
gaggccctgtgcaccagaatggccattatggtcaatggcaggttccgctgcttggggagc
gttcagcacttaaagaacaggttcggagacggctacaccatcattctgcgtgtggctggg
ccggaccctgacctaccgccggtgatgaagttcattgagagtaagctgcctggcagcacc
ctgaaggagaagcacaggaacatgctgcagtaccagctgtcctcctcactcacctccctg
gcacacatcttcagcatcctggccaagaacaaggaccttcttcgaatagaggactactcc
gtgtcgcagaccacactggaccaggtttttgtgaactttgccaaggaccagagtgacgat
taccactcaaaagacaattcagtaaagcgcaaagaggcggtggtggacattaccccgctc
agctcacggcaggctgaagagaagctagccgaggagaggctaaaggagagcttggtgtga
DBGET
integrated database retrieval system
