Oncorhynchus masou masou (cherry salmon): 135545980
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Entry
135545980 CDS
T10723
Name
(RefSeq) platelet-derived growth factor C-like
KO
K05450
platelet derived growth factor C/D
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04010
MAPK signaling pathway
omm04020
Calcium signaling pathway
omm04510
Focal adhesion
omm04518
Integrin signaling
omm04540
Gap junction
omm04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135545980
04020 Calcium signaling pathway
135545980
09133 Signaling molecules and interaction
04518 Integrin signaling
135545980
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135545980
04540 Gap junction
135545980
09142 Cell motility
04810 Regulation of actin cytoskeleton
135545980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
omm04052
]
135545980
Cytokines and neuropeptides [BR:
omm04052
]
Cytokines
Growth factors (RTK binding)
135545980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
135545980
NCBI-ProteinID:
XP_064830075
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All DBs
Position
9:complement(39117401..39204607)
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AA seq
333 aa
AA seq
DB search
MILPLFILLVSLLQKHGSEAESSHISKFQQPSLKEQNGVQDSQHEKIIPVTGEGVIHSPD
FPLTYPRSTVLVWRLVASNDNMRIQLSFDERFGLEDPEDGICKYDFVELEEPSEDTILGR
WCGSQVPASHMSKGSQIRVRFRSDEYFPSEPGFSIRYSLLPMPEVTPSLQSADALSEAVA
GLGTVEEVMKYLEPERWQLDMEDLYKPTWQILGKSFLHNKKSRGVDLNLLREEVRLYSCT
PRNFSISLREELKRTDAIFWPSCLLVKRCGGNCACCSHRCSDCQCVPTRVVKKYHEVLLL
KHRSGGRGLQKSMTDVPLEHHEECDCVCKDDWD
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgatccttccattattcatcctacttgtgtcgcttctccaaaaacatggctcagaagct
gaatcaagtcacatcagcaaattccaacaaccaagtttaaaggaacaaaacggagtccaa
gattcccagcatgagaagataatccccgtcacaggagagggagtgatccatagtccggac
ttcccactcacctaccccaggagtaccgtgttggtctggagactagtggcctccaatgac
aacatgagaatccagttatcattcgacgagaggtttggcctggaagacccagaggatgga
atatgcaagtatgattttgtggagctcgaggagccgtctgaggacaccatcctgggccgc
tggtgcgggtcccaggtacccgccagccacatgtccaaaggcagtcagatccgggtgaga
ttcagatctgatgagtacttcccctccgagcctggctttagcattcgctactccctgctc
cccatgcccgaggtaactccatctctgcagagcgcagatgcgttgtctgaggccgtggct
ggcctcggtaccgtggaggaggtcatgaagtacctggagcctgagagatggcagcttgac
atggaagacctatacaagcctacgtggcagatcctggggaagtcattcctccacaacaag
aaatccagaggagtggatctcaacctgttgagagaagaggtgagactgtacagttgcacg
ccgcgcaacttctccatctccctgcgcgaggagctcaagaggacggacgccatcttctgg
cccagctgcctcctggtgaagcgctgcgggggcaactgtgcctgctgctcgcatcgctgc
tccgactgccagtgtgtgcctacccgggtcgtcaagaagtaccacgaggttctcctgctg
aagcaccgaagcgggggccgaggcttgcagaaatccatgaccgatgtgcccttggaacac
cacgaggagtgcgactgtgtttgcaaagacgactgggactga
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