Oncorhynchus masou masou (cherry salmon): 135546035
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Entry
135546035 CDS
T10723
Symbol
tsc1a
Name
(RefSeq) TSC complex subunit 1a isoform X1
KO
K07206
tuberous sclerosis 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04140
Autophagy - animal
omm04150
mTOR signaling pathway
omm04218
Cellular senescence
omm04910
Insulin signaling pathway
omm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
135546035 (tsc1a)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135546035 (tsc1a)
09143 Cell growth and death
04218 Cellular senescence
135546035 (tsc1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
135546035 (tsc1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135546035 (tsc1a)
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Gene cluster
GFIT
Motif
Pfam:
Hamartin
TFCD_C
Rep-A_N
Motif
Other DBs
NCBI-GeneID:
135546035
NCBI-ProteinID:
XP_064830188
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All DBs
Position
1:complement(50422769..50455910)
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AA seq
1236 aa
AA seq
DB search
MAKEQSNVSDLLPLLESSDLHELDQIKSVLNDHLCTERGSVLLNGLVDYYLETSSPQAIL
ILCSVREPHDKHLLDKLNECMAKPACRLPTLTLLGHVIRKQPPWMHKITRFPLLTSLLKC
LKTESDVVVLITGVLVLITLLPVIPQAGKQHIYDFFDIFGRLASWSLKNPGHVHGVYLIH
LHASVYSLFHRLYGMYPCNFVSYLRSHYSMKENVDTFEEVVKPMLGHVRIHPELVTGTND
YELDPSRWKRFEIHDIVIECAKVSLDPKEASCEEGYSSMPDRVTIHHHPHLRSGLDYTAS
PYTDFLSSFGSSASTPLSVGRPPLSLSLPQLPGTQSSLCSPHTSFHQNQHCEVDPAGNKV
SMWSPCSDCGMTTPPTSRGISPANVLELSQSASHAPSQTASTSGGKCLSPAPTLSNEFEH
LCSPPNTTNQLKQKPSGEEERGNPEVISKGAAGESVKTMSLTELSDFVKEQDLDIQRMEN
EHDEDAITEELLKLTEQKHKADRSFYSTTETLTGPQEKEMLLTTSNQSLNREAPCLVSTP
DKSECSAGGGDQQLPWSFRPCFTPIDNLLTGFSTSQSPYRAEEEGGSGLANYGLFSSPSI
LRDPVNPIYEPLFELALPRAASLFVGRKTSVALAQRAAGDEGERNASKGEEEGDEMAAMS
PLEVLDRLIQHGNEAYEKVLKRLPMPNKSVDWTHFGGKQQSMKAKGTTPLDELHTLRSQV
LLLHNQLLYERYKREQHAIRNRRLLRRIINATAMEEQNSSMKAQLKLQDIEIQSLQASLV
EEQQRYRRLKEDGDTETACLHSQFQQLQQGHDLYLSKAQKLQSELQECQSNMGELEAELQ
KANNEAYNTGHQLTQLSLKLTNSENVQQQMYLLNKQLLLLGETNKLAIQEVQRLGPESSK
GLQMLQSSMGKEQECLRQSMLQQTQGLEAAQQRIGDLEAQLAKKEHLILEQKLFLEEVKG
QTKGQLQASESRYLAMRRVTQVLQTEMLQLYSQLDAEMLTTNQGLSESDTNEPSSAPPGT
SRPNGSSSRTVPTAQGNSDRRTQAWPPGNGGTLPPGGGAQSTTSVTLNGSLKQPPLLSEM
SPTHLAAFPLSLSSAGTPFTVGTYPSAKSFLGMHTRELFCNKSDSQCDGDEDTQLSRLSH
SLVVGEESSESTENVQSSPFPPPATGTPPHSPAAAPPSQGSAQSALAQEPPPSDSQQLRA
HHGQGARPRASAAAAARQRRKDLRIMDYNETQQEHI
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggagcagtcgaatgtgagcgacctcctcccgctcctggagtcgtccgatctg
catgaactggatcagatcaaaagtgtcctcaatgaccacctctgcacagagcgaggatcc
gtgctgctcaatggccttgtggattactaccttgagaccagctctccacaggctatcctc
atcctctgttctgtcagggagcctcatgacaagcacctcctggacaagctgaacgagtgc
atggccaagccagcctgtcggctgcccacccttaccctcctcgggcacgttatccgcaag
caacccccctggatgcacaagataacccgcttccctctgctcacctccttactcaaatgc
cttaagacggagtctgatgtggtggtgctgataactggagtcctagtgttgatcacactg
ctacccgtgataccccaggcagggaagcagcacatatacgacttctttgacatctttggc
cgactggcgtcctggagtctgaaaaacccagggcatgtgcatggggtgtatctgatccac
ctccatgccagtgtgtactccctcttccaccggctctatggcatgtacccctgcaacttt
gtctcctacctgcgctcccactacagtatgaaggagaacgtggacacctttgaggaagta
gtgaagccgatgttggggcacgtgcggatacatcccgaattggtcactggaaccaacgac
tatgagctggacccctccaggtggaagaggtttgagatccacgacattgtgattgaatgt
gcaaaagtctccctggaccccaaggaggcatcctgcgaggagggttactccagcatgcca
gaccgcgtcaccatccaccatcacccccacctgcggtccggtctcgactacactgccagt
ccctacactgacttcctcagcagcttcggtagctctgcctctacccccctatcggttggc
cgaccacctctctccctgtccttaccccagctaccagggacccagtcctccctctgcagt
ccccacacctctttccatcagaaccaacactgtgaagtcgaccctgctgggaataaagtg
tcgatgtggagtccgtgctcggattgtggaatgaccacacctcccacctcgaggggtatc
tcccctgccaatgttctagagctatctcaaagtgcctcccatgcccccagccaaacagcc
agcacatcaggtgggaaatgtctcagtcctgccccgactctctccaatgagtttgagcat
ctttgttcaccccccaacacaaccaaccagctgaagcagaaaccgagtggagaggaagag
agaggcaaccctgaggtcatcagtaaaggtgctgctggtgagagtgtgaagaccatgtcg
ttgaccgagttgtcggacttcgtcaaagagcaggatttggacattcaaaggatggagaat
gaacatgacgaggatgccatcacagaggagctcctgaagttgactgagcagaagcacaag
gcagaccgctctttctacagcactacagagacactgactgggcctcaggagaaggagatg
ctcctcaccacctccaaccagagcctaaacagggaggccccgtgcctggtttccacaccc
gacaagagcgagtgctcggcggggggaggagatcagcagctcccctggtccttccggccg
tgcttcacccccatcgacaacctgctgaccggatttagcacttctcagagcccctacagg
gccgaggaggaggggggctctggtctggcaaattatggcctgttctcctcccccagtatc
ttaagggaccctgttaaccccatctacgagcctctgtttgagctggccctgcccagggct
gcctctctgttcgtggggaggaagacttcggtggcactggcgcagagggccgctggcgac
gagggggagaggaacgcaagcaagggggaggaggaaggggacgagatggcggcaatgtcc
ccgctggaagtcttggatcgcctcattcagcacggcaacgaggcctatgaaaaagtgctc
aagagattgcccatgccaaacaagtcagtagactggacacactttggaggtaaacaacag
agtatgaaagcgaaaggcaccacgccgctggacgagctgcacacgctgcgcagtcaggtg
ctgctgctccacaaccagctcctgtacgagcgctacaagagagagcagcatgccatccgc
aaccgccgtctgctccgccgcatcatcaacgccaccgccatggaagagcaaaacagctca
atgaaggcccagctgaagctgcaggacatagagatccagtctctgcaggccagtctggtg
gaggagcagcagcgctacaggcgcctgaaggaggatggagacactgagacggcttgcctc
cacagtcaattccaacagctacagcagggccatgacctgtatctatccaaggctcagaag
ctgcagagtgagttacaagaatgccaaagcaacatgggagagctggaggctgagcttcag
aaagccaataatgaggcatacaacactggacaccagctcacccaactgtccctcaagctc
accaacagtgagaacgtccagcagcagatgtacttgttgaacaaacagctgctgttactg
ggagagaccaacaagctggcaatacaggaggtgcaacgcctgggaccggagagcagtaag
ggactgcagatgctgcagtcatccatgggcaaggagcaggagtgtctgcgtcagagcatg
ctgcagcagacccaggggcttgaggcagcccagcagcgcatcggagacctggaggcccag
ctagccaagaaggagcacctcattctggagcagaagttgttcctggaggaagtcaaaggc
cagaccaagggccagctgcaggcgtcggagagcaggtacttggccatgcgacgggtcacc
caggtgctgcagacggagatgctgcagctctacagccagctggacgctgaaatgctgacc
accaaccagggtctctcggagtctgacaccaacgagccctccagcgctcctcctggtact
tccaggccaaatggcagcagtagcagaactgtgccaactgctcagggcaactctgaccga
cgcacccaagcgtggccgcctggcaacggaggcactttaccacccgggggtggagctcag
tccactacctcggtgaccctcaacggcagtctgaaacagccccctctcctgtcagagatg
tcccctacccacctggccgcctttccgctttccctatcctccgctggcacccccttcact
gtgggtacctaccccagtgccaagagcttcctgggaatgcacacccgagagctgttctgc
aacaaaagcgatagccagtgtgacggggatgaggacacccagctcagtcgtctctctcac
agcctggtcgtcggtgaggagagcagcgagtcgacagagaatgtccagtccagcccattt
cctcctcctgccacaggcacccccccccattctcctgctgctgctcctccatcacagggc
tctgctcagtctgctttggcccaggagccacccccgtcagacagccagcagcttagggca
caccacgggcagggggcaaggcctagggccagtgctgccgctgccgcccgccagaggagg
aaggacctgcggatcatggactacaatgaaacacagcaggagcacatctga
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