Oncorhynchus masou masou (cherry salmon): 135546466
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Entry
135546466 CDS
T10723
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03030
DNA replication
omm03420
Nucleotide excision repair
omm03430
Mismatch repair
omm03440
Homologous recombination
omm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
135546466
03420 Nucleotide excision repair
135546466
03430 Mismatch repair
135546466
03440 Homologous recombination
135546466
03460 Fanconi anemia pathway
135546466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135546466
03032 DNA replication proteins [BR:
omm03032
]
135546466
03400 DNA repair and recombination proteins [BR:
omm03400
]
135546466
Transcription factors [BR:
omm03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
135546466
DNA replication proteins [BR:
omm03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
135546466
DNA repair and recombination proteins [BR:
omm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
135546466
MMR (mismatch excision repair)
135546466
DSBR (double strand breaks repair)
HR (homologous recombination)
135546466
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
DUF8448
Motif
Other DBs
NCBI-GeneID:
135546466
NCBI-ProteinID:
XP_064830974
LinkDB
All DBs
Position
9:63965906..64026477
Genome browser
AA seq
607 aa
AA seq
DB search
MNNMLTKGAIEDLTKGSNDLPNPILQLVNIRKIDGGSGPARFRLMMSDGQHSMSSFMLST
QLNPMAEDNRLAPNCICQLKRNVTNVLKDGRHVVVILDMEVVKSADEVAGKIGEPTPYVE
GQSKAPQSAPNPSVHHLQPQNGNYGTMNKGPSREFGGKKAMPLSAMPSTPGGSSKVVPIA
SLNPYQSKWTIRARVTNKSGIRTWSNSRGDGKLFSMEIVDESGEIRVTAFTQEVDKFYSI
IETGKVFYISKGSLKIANKQYSSLKNDYEMTLNGESTIIPCEDTQDVPMVQCNFISIADL
EAREKDTILDVIGVCKSVADVTRLTTKNNREVSKRTLNLMDQSGKLVEVTLWGEEAENFD
GSGQPILAIKGAKLSDYGGRSLSASFSSTVMVNPDIPEAYKLRGWYDKEGHSMDGQSLTE
ARTGGGGGNTNWKTLTDIKTEHLGHGDKADYFSCIATIVYIRKENCLYQACPSQDCSKKV
VDQQNGMFRCEKCDKEFPNFKYRLILSANIADYGDNQWVTCFQESAEAILGQNAAYLGQL
KDSNEAAFEEIFQQANFHTFIFRNRVKLETYNDESRIKATVMEVKPVDHKEYSKRLIMNI
RKMAATQ
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaataacatgctgacaaagggagcgatagaggatctaaccaaaggctctaatgattta
ccgaaccccattcttcaattagtgaacatccgtaaaattgatggaggcagtggaccagcc
cgctttcgtctgatgatgagtgatggacagcactcaatgtcctcgttcatgctctccacc
caactcaacccaatggctgaggacaaccgactggccccaaactgtatctgtcagctgaag
aggaatgtgaccaatgtcctaaaggatggacggcatgtggtggtcatattagacatggag
gtggtgaagtctgctgatgaggtggctggaaagatcggagagcccacgccttacgtggaa
ggtcagagtaaagccccacagtcagcccccaatccctcagtccaccacctgcagccccag
aatggaaattatggcaccatgaacaaaggtcccagcagagagtttggggggaagaaggcc
atgcctctgtctgcaatgcccagcactcctgggggatcctccaaagttgtgcccattgcc
agcctcaacccctaccagtcaaagtggaccatccgagcacgtgtcaccaacaagagcggc
atccgcacctggagcaactctcgtggggacggcaagctgttctctatggagattgtggat
gaaagtggagagatcagagtgactgcctttacccaggaggtggacaagttctacagcatc
atcgagactggcaaggtgttctacatatccaagggatcactgaagatcgccaacaagcag
tactcgtccctgaagaatgactatgagatgaccctaaatggagaatccaccatcatcccc
tgtgaggacacccaggacgtacccatggtgcagtgcaacttcatctctatcgctgacctg
gaggcccgagaaaaggacaccattttggatgtgattggagtgtgtaagagcgtggctgac
gtgacccgcctcaccaccaagaacaaccgtgaggtctccaagaggacactcaacctgatg
gaccagtctggtaaactggtggaggtcaccctgtggggagaggaggcagagaactttgat
ggatctgggcagcccatcttggccatcaagggggccaagctgtcggactatgggggaaga
tctctgtctgcttcgttcagcagcaccgtcatggtcaaccccgacatccctgaggcatac
aagctgcggggctggtatgacaaggagggccactctatggatggccagtctctgacggag
gcgaggacaggtggaggaggagggaacaccaactggaagaccctgactgacatcaagacg
gagcacctcggacacggagacaaggcagactacttcagctgcatcgccaccatagtgtac
atccgtaaggagaactgtctgtaccaggcgtgccctagtcaggactgcagtaagaaggtg
gtggaccagcagaacggcatgttccgctgtgagaagtgtgacaaagagttccccaacttc
aagtaccgactcatcctctctgccaacatagcagactacggggacaaccagtgggtgacc
tgcttccaggagagtgctgaagccatcctgggacagaacgctgcttacctagggcaactc
aaagactcgaatgaagctgccttcgaggagatctttcagcaggccaacttccacacgttc
atcttccgcaacagagtcaagctggagacctacaatgacgagtcccggatcaaggccacg
gtgatggaggtgaaacctgtggaccacaaggagtacagcaagagactcatcatgaacatc
aggaagatggctgccacccaataa
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integrated database retrieval system
