Oncorhynchus masou masou (cherry salmon): 135546502
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Entry
135546502 CDS
T10723
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omm03021
]
135546502
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
135546502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
135546502
NCBI-ProteinID:
XP_064831058
LinkDB
All DBs
Position
9:complement(66320019..66352433)
Genome browser
AA seq
2121 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWRRFVWQGPTSSPILFPVTEEDPILCSFSRC
LAADVLSVWRRHHTPGRRELWLFWWGDDPSFAELIHHELSSEEDGEWESGLSYECRTLLF
KAVHNLLERCLMNRSFVRIGKWFVKPYEKDEKPVNKSEHLSCAFTFFLHGDSNVCTSVEI
AQHQPVQRLGEEHLSLAQQNASPLQVILSPYGLNGTVTGQSFKMSDHPTQKLIEEWRQFY
PISPSSKDRPEDKMEDADWEDDSLAAVEVLVAGVRMVYPACLVLVPQSDLPALAPQGSAN
PSPVLCEGLGAHRDPAMSSVTLTPPTSPEEAQTDSQAAQRWLKLCSTVDGFSSNSSGIHG
SKIPRRLAAQVVESVWQECTTNRAQNKRKFATLTNGTCEEEEGDKTGVWDFVEFSHRAHC
NCSRHKNQKQRSGSTSGNPPSVGQPSQPLPKHKLGEKLEKGEKQQKRPQTPFHHRSYVFE
EQAMEPQRLCMRTQDEGPYPSLHHVDTAPSKAPMLHTHRPLQDLAGSPQPPPLSPHPCER
GEEDPGAMKSSSTPIHQHFYPPSSEPCLLPQKTSPDEPHLEPLPLPFPPAYPDSLEPTVY
VGSAINPNEDSAHNPWKYFNLPRKKTSDFFTPLLPVDKLQDDSGEGGGQENIVSVTELMS
GSGRPLKVSEDLVRTYTQRRNSHLVAAMADEDQEEEPDPYAFVEGDEEFTFTDKKDKPGS
DRETSKRHKGDDGSGTSADDGQGAAGGKPVPSTSLIHETDLAVSINDLDNLFNSDEDELA
QPGSRRAGVHGDKFGSKEHKTSNLDPLSCISSADLHKMFPTPPSLEQHMIGYSPMNTAGK
DYGGLEAGVGLTLLDGSQFSSHYKMEVEEGFCSPKPSEIKDFSFVYKSEACRAFTGCSMF
APLKMLPSQCMMPIKLPEDCVYTPSWNMGKLELIPPVPTMGLLTKDGNIPSVEPDYQSYT
PQTHTPFMSNSAPPSNSGTGILPSPATPRFSAPTPRTPRTPRTPRGPASVQGSLKYDNSD
LYSPASTPSTCRPLSSVEPATVPSIPEAHSLYVTLILSESVMNLFKDCNFDSCCVCVCNM
NIRGADVGVYLNDNGEAQYPCTCGFSAVVNRRYGSSAGLFLEDELDVVGRGSDAGRDSER
RFQELRAASLHRTGNPTERPPDELILLLQDQCTNPFSRMAGVEYPKALSSGPSHSSLRVE
ERDCYNDCYMALEHGRQFMDNMSGGKVDEVLVKSTCLHNWPKRKAAEVSRLFSQDVLRVL
LSLQPVLQDAIQKKRSVRSWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLVGYEY
DFVVLSPFGLPYWEKLLLDPFGSHRDVGYVVICPENEALLRGAKSFFKDLTAAYEACRLG
QHRPICKTHADGILRVGTAEGRNRAEQPLSDWFLKMASSNGNSEAFSKLKLYAQVCRHDL
APYLAGQSLDSSLLNQRGPTVASPQSSSSQSPSSTTPSSGPQSSTSSGTAQPANTNSTPP
SSTGPQAMGGIGGVGMPSAKPSSYTPYGTSGLQGSVSQNGPQTCPQTAGENGPTANQPQA
STEPVETTLERDKVGIPTDGESHAVTFPPSIVVYIVDPFSYEDGERDTHSSVWTLGLLRC
YVEMLQFLPPHIRNCVSVQIIPCQYLLQPVRIEERHLYGQHLKSLAFSVFTQCRRPLPGN
TNIKALTGFGPGLAIDMALRSTERPECLRLYTPPFILAPIKDKQTELGETFGEASQKYNV
LFVGYCLSHDQRWLLASCTDQSGELLETCIISIDVPNRARRKKGSARRLGLQKLWEWCLG
LVQVTSLPWRVVIGRLGRMGHGELRDWSMLLSRRNLQSLSKRLKETCRMCGISAADTPSI
LSACLVAMEPQGSFVIMPDSVSTGSVFGRSTTLNMQTSQLSTPQDTSCTHILVFPTSAMV
QVNNGTTEQNLDIAFNPINPDGSDGMGIFDLFDNDMVDPDLINILPNSPTTSPVHSPGGH
YHQGGDGSKGQSTDRMESHEEALNILQQPMALGYFISTAKAGPLPDWFWSACPQAQNQCP
LFLKASLHLHVSSVQSDELLHSKHSHPLDSNHTSDVLRFVLEQYNALSWLTCDPATQDRR
SCLPVHFVVLNQMYNFIMNML
NT seq
6366 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatgttttgtaccaaacggggccagtttggaggactgccactccaacctattt
tgcctggctgacctgactgggataaaatggcggcgttttgtgtggcaggggcccacttcc
tcgcccatcctgttccctgtgacggaggaggaccccatcctgtgcagcttcagccggtgc
ctggcggccgatgtgctaagcgtgtggcgaaggcaccacacccctggtcgccgcgagctc
tggcttttctggtggggggatgaccccagcttcgccgagctcatccaccacgagctgtca
agtgaggaggacggcgagtgggagagtggcttgtcctatgagtgccgtacactcctgttc
aaagctgtccataacctgttggagcgttgcctcatgaaccgcagctttgtccgtattggc
aagtggtttgtcaagccctacgagaaggatgagaagcctgtcaataagagtgagcacttg
tcgtgtgcgttcacttttttcctgcacggggacagtaacgtgtgcaccagcgtggagatt
gcccaacaccagcctgtccagaggctaggtgaagaacatctgagcctggcacaacaaaat
gccagccccctgcaagtcatcttgagtccatatggtctgaacgggacggtcacgggtcag
tccttcaagatgtctgaccaccccacccagaaacttattgaggagtggaggcagttctat
cccatcagccccagctccaaggaccgccccgaggacaagatggaggatgcagactgggag
gacgactcactagcagccgtggaggtccttgttgctggagttaggatggtgtaccctgct
tgtctagtactggtgccccagtcagacctcccggcactggccccacagggatcagccaac
ccctcacctgtcctgtgtgagggcctgggggcccacagagaccctgccatgtcctctgtc
acccttacccctcccacatcaccggaggaggcccaaacagattctcaggcagcacagagg
tggttgaagctctgctcgacagtggatggtttcagctccaacagcagcggtatccacggc
agcaagatcccccgcaggctggctgcccaggtggtggagagcgtgtggcaggagtgcact
accaaccgggcccagaacaagaggaagtttgctacattgaccaatggtacctgtgaggag
gaggagggggacaaaacaggagtgtgggattttgtggaattctcgcatagggcacactgc
aactgctcaaggcataaaaaccagaagcaacgatcaggcagcacctcaggaaaccccccg
tcggtgggccagccctcacagccgctacccaaacacaagctgggcgagaagctggagaag
ggggagaagcagcagaagaggccccagacacccttccaccaccgcagctatgtgtttgag
gagcaggccatggagccccagaggctgtgtatgagaacccaggatgagggcccctacccc
agcctgcaccacgtggacacggccccttccaaagcccccatgttgcacacccacaggccc
ctccaagacctggccggctccccccagccccctcctctcagcccccacccctgcgagcgc
ggggaggaagaccctggggccatgaagagctcctccacgcccatccaccaacacttctac
cccccctcctccgagccctgcctgcttccccaaaagacctcgcctgacgagccccacctg
gagcccctgcctctgcctttcccacctgcctaccctgattccctggaacccactgtctat
gtgggatcagccatcaaccccaacgaagactcggcccacaacccctggaaatacttcaac
ctgccacggaagaagacctccgacttcttcacaccattgttgcctgtggacaaactacag
gatgactccggggaaggaggagggcaggagaacattgtctctgtcacagaattgatgtct
ggctctggcaggcctctgaaggtgtctgaagacctggtaaggacctacacccagaggagg
aacagccacctggtggctgccatggctgacgaggatcaggaggaggagccagacccctat
gccttcgtggagggagacgaggagttcactttcactgacaagaaggacaaacctggctcg
gacagagagaccagcaagagacacaagggtgacgatggcagtggaacctcagcagatgat
ggtcagggtgcagctggtggaaagcctgtaccctccaccagccttatccatgagacagac
ttggctgtgtccatcaacgacctggacaacctcttcaactcagacgaagacgagctagcg
cagcctggatccaggagagcaggagttcatggagacaagtttggcagtaaggaacacaaa
acatcaaatctggaccctctgtcctgcataagctcagctgacctgcacaagatgttcccc
acccctccctccctggagcaacacatgattggctactcccccatgaacactgcgggcaag
gactacggtggcctggaggccggggtgggcctcactctgctggatgggagccagtttagc
agccactacaagatggaggtggaggaaggcttctgcagccccaagccctctgagatcaag
gacttctcgtttgtttataagtcagaggcgtgcagggcattcacgggctgctccatgttt
gctccgctgaagatgctgcccagtcagtgtatgatgcccatcaagctgccagaggactgt
gtttacacacccagctggaacatgggcaaactggagctcataccccctgtgccaaccatg
ggcctcctcaccaaagacggtaacatccccagtgtggagccagactaccagagctacaca
ccacagacccacactcccttcatgtccaacagtgccccacccagcaacagcggcacgggc
atcctgccctccccggccacaccccgcttctccgcccccaccccacgcactccccgtacc
ccacgcaccccaagagggcctgccagtgtccagggatcgctcaaatacgacaactctgac
ctctactcgcctgcctccaccccttctacttgccgacctctcagctcagtggagccagcc
actgtgccctccatccccgaggcccacagcctctacgtcaccctcatcctctctgagtct
gtcatgaacctcttcaaggactgtaactttgacagctgctgcgtgtgtgtgtgcaacatg
aacatccgtggcgctgatgtgggcgtgtatcttaacgacaacggcgaggcccagtacccc
tgcacctgtggtttcagcgccgtggtcaaccgtcgctacggcagctcggccggtctcttc
ctggaggatgagctggacgtggtggggcgtggctcggacgccggccgggactctgagagg
cgtttccaggagctgcgcgctgcctcccttcacaggaccggcaaccccaccgagaggccc
ccagacgagctcatcctgttgctgcaggaccagtgcaccaacccattctcccgcatggct
ggggtggagtaccccaaggcgttgtcctccggcccctctcactcttctctacgggtagag
gagagggactgctataacgactgctacatggctctggagcatggccggcagttcatggac
aacatgtcaggaggcaaggtggacgaggtgctggttaagagcacgtgtctacacaactgg
cctaaacgcaaagctgcagaagtgagcaggctgttctctcaggacgtgctgcgggtgctg
ctctcccttcagcctgtactccaagatgccatccagaagaagagaagcgtacgttcctgg
ggcgttcagggacctctcacctggcagcagtttcacaagatggccggcaggggatcctac
ggcactgacgagtctccagagcccctccccatccctaccttcctggtcgggtatgagtat
gactttgtggtgctgtcgcccttcggcctgccttactgggaaaagctgctgctggacccc
ttcggctcccacagggacgtgggctatgtagtcatctgtcccgagaatgaggctctgctc
cgtggggctaagagcttcttcaaggaccttacagccgcgtacgaggcctgtcgactgggt
cagcacagaccaatctgtaagactcatgcagatggaatattgcgggttggtacagcagag
ggcaggaaccgggcagagcagcctctcagtgactggttcctcaagatggccagcagcaac
ggaaacagcgaagccttcagcaaactcaaactgtatgcccaagtgtgccggcatgacctg
gctccatacctggctggacagtctctggacagctctctgttaaaccagcgtggccccact
gtggcctcccctcagtcctcctcctcccagtcccccagctccaccaccccctcctcaggt
ccccagagctccaccagcagtggcactgcccagcctgccaacaccaacagcaccccaccc
tcctccacaggcccccaggcaatgggagggatagggggagtaggaatgccgtcggccaag
cccagctcctacacaccatacgggacatcaggcctgcagggcagcgtctcccagaatggg
ccccagacgtgtcctcagactgcaggggagaatggccccactgccaaccagccccaggcc
agcaccgagcccgtagagaccacattggagagagacaaggtgggcatcccgacagacgga
gagtcccatgctgtgactttcccgccgtccattgtggtttacatcgtggaccccttcagc
tacgaggacggggagagggacacccactccagtgtgtggacgctgggtctgctgcgctgc
tatgtggagatgctccagttcctgccgcctcacatcagaaactgtgtgtctgtgcagatc
attccctgtcagtacctgttgcagccggtgcgcattgaggagcgccatctgtacggtcag
cacctcaagtccctggccttctcagtgttcacgcagtgcagacggcccctccccggcaac
accaacatcaaggctctgacgggcttcggcccaggcctggccattgacatggcactgagg
agcacagagaggccagaatgtctgcgtctgtacacaccaccgttcatcctggcacccatc
aaggacaagcagacagagctaggggagacgtttggcgaggcctctcagaagtacaatgtg
ctgtttgtgggctactgcctgtcgcatgaccagcgctggctcctagcctcctgtactgac
caatcaggagagcttctggagacatgcatcatcagcatcgatgtgcctaacagggctcgg
aggaaaaagggctcagccagacgactgggcctgcagaagctgtgggagtggtgtctaggc
ttggtgcaggtgacatcactgccctggagggtggtgattggccgcctgggcagaatgggc
cacggagagttacgagattggagtatgctgctgagcagaaggaacctgcagtctctcagc
aagcgtctcaaggagacctgcaggatgtgtggcatctctgccgcagacacacccagcatc
ctcagcgcctgcctggtcgccatggagcctcaaggctcctttgtcatcatgccagactct
gtgtcaacaggctcagtgtttggccgcagcaccactctgaacatgcagacgtcccagctg
agcactcctcaggacacgtcctgcacccacatcctggtgttccccacctcggccatggtg
caggtgaacaacggcaccaccgaacagaacctagacatcgccttcaaccccataaaccct
gatggttcagatgggatgggcatctttgacctgtttgataacgacatggtggaccctgac
ctcatcaacatcctgcctaactcccccaccacctcccctgttcactccccgggtggacac
tatcaccaggggggagacggcagcaagggccaaagcacagaccgtatggagtcccatgag
gaggccctgaacatcctgcagcagcctatggctctgggctacttcatctccactgccaag
gctggccccctacctgactggttctggtcagcctgcccccaggcacagaaccagtgccca
ctgttcctcaaggcctccctgcacctccacgtgtcctcggtccaatcagacgagctcctc
cacagcaaacactcccaccctctagactccaaccacacctcagatgtgctcaggtttgtg
ctggagcagtacaacgccctctcctggctgacgtgtgaccctgccactcaggaccggcgc
tcctgtctgcctgttcactttgtggtgctcaaccagatgtacaactttatcatgaacatg
ctctga
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integrated database retrieval system
