Oncorhynchus masou masou (cherry salmon): 135546719
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Entry
135546719 CDS
T10723
Symbol
dhx34
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135546719 (dhx34)
Enzymes [BR:
omm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
135546719 (dhx34)
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
135546719 (dhx34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
zf-C2H2_DHX34
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
135546719
NCBI-ProteinID:
XP_064831426
LinkDB
All DBs
Position
9:complement(87670900..87700958)
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AA seq
1165 aa
AA seq
DB search
MSERRRDSRSWDWDNPQCRAQMDQIFFRRHDYIQNGTTEHKEFWNFFDRFQRFKTRKDMS
GGSRKEDMEEGRDRKKTVDLGLPKEYDARYRINVSVCTKDTEERLETGRSDQRHRHSSSG
PGSQEVADCRLALLHFLDFSQRQSFGKLAKLRAEQKALPIFQYRDRIVELVRANPVVVVA
GDTGCGKSTQVPQYLLSSGFSHIACTQPRRIACISLAKRVSFESLNQYGSKVGYQIRFEG
TRXPSTKLLFLTEGLLLRQIQADGTLEQYQVLIVDEVHERHLHCDFLLGVLRSLLATXPD
LRLVLMSATINIKLFSSYFSNAPVLQVPGRLFPIQVIYQPIPQEEQPSRSEKLDPRPYLR
VLQGIDQRYPPEERGDLLLFLSGVAEISTILEACQAYATHTKRWIVLPLHSTLSLVQQDK
VFDISPPGVRKCIISTNVAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWISRAS
SEQRKGRAGRTGPGVCYRLYSESDYEAFAPYPVPEIHRVALDSLVLQMKSMSLGDPRSFL
FIDPPPAASIQTAVTYLREQGALDARGDLTSIGSLLAQLPVDVVIGKMLVLGSVFNLVEP
VLTVAAALSVQSPFLRSAQHNPDCATARQPLHSNQGDPFTLLNTFNAWVQVKGERGGASR
KWCRRRGLEEQRLYEMVNLRRQFKELLRSHGLLEVLEERAPSGGERGQRRERLTERRKLH
QLKREHDLAEGGRRKVLRLEEGQDGEGDSGSDTEQGATGRDGKDKDQTGGHNLDIQEVKF
KLRHNVSELQEAASASQDLSSRQQALLKLLLCRGLYPQLALPDEHNANRKDSEQVFHTRN
KQGVVIHPTSVFASDPEVLHVPEEGNREGPDKGESSKHQLLAFVTLLETNKPYVSNCVRV
PALQALLLVANSLDSNADCTRLVVDGWLEVGLTGEGALKVLSTSLTLRADWERLLLAQLG
QGTLGAGAGSRAKAGRGEGLGVPGLSRKDLEKLSEGLVRFLLYTEVSYSLRRLTGLQVQN
LYVGPQAQSEFSEPHAPNPLFPGMEAQPDTIKGGLQVTKYFTYNCLTDSKDLYSECLRTF
WSCPHCDLYSPVTPLERMSHEATCRPPGEQQDNQDKEGDDVKAASSSFSVSSLARVYHCD
VCDKDLTLTSTEILKHKRQHMHSGR
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaggagaagagacagccgtagctgggactgggacaaccctcagtgccgagct
cagatggaccaaatcttcttccgccggcatgactacatccagaacggaaccacggaacac
aaagagttctggaacttcttcgaccgcttccagaggttcaaaaccaggaaggacatgtca
gggggcagcaggaaggaagacatggaggagggcagagacaggaagaagactgtagatctg
ggtctgccaaaagaatatgacgcccgctatcggatcaacgtgtcagtttgtaccaaagac
acagaggagaggctggagactgggaggtctgatcagagacacagacacagctcctcaggc
ccagggagtcaggaggtagctgattgtcgcctggctttgctgcacttcctggacttcagc
cagaggcagagctttgggaagctggccaagttgagggcggagcagaaagcccttcctatc
tttcagtaccgggaccggatcgtggagttggtgcgggctaacccggtagtagtggtggcg
ggggatacaggctgtggaaagtccacccaggtcccccagtacctcctctcctctgggttc
agtcacatagcttgcactcagcctcggcggattgcctgtatctccctcgccaagagggtc
agcttcgagagtctcaaccagtacggctccaaggttggctatcagatccgtttcgagggg
acccgtnacccgtcaaccaagctgttgttcctgacagaggggttactactgagacagatc
caggctgacgggaccctggagcagtaccaggtgttgattgttgacgaggtgcatgagcga
cacctccactgtgacttcctccttggggtcctgcgctccctcctggccaccncgcccgac
ctccgcttggtcctcatgtccgccaccatcaacataaaactcttctccagctactttagt
aatgcacctgtactgcaggtaccgggcaggctcttccctatacaggtgatctaccagccc
atcccacaagaggagcagccgtcccgctctgagaagctggacccccgcccatacctccgt
gtgctgcagggcatcgaccaacgctacccgcccgaggagaggggcgacctgctgcttttc
ctcagcggcgtggcagagatatctaccatcttagaggcatgccaggcctacgcaacacac
accaagcgctggatcgttctgcccctccacagcaccctgtccctggtacagcaggataag
gtgtttgacatctctcctccgggagtgaggaaatgtatcatctctaccaacgtagcagag
acatcagtcaccatcgacggggtgcgcttcgtcgtcgactcgggcaaggtgaaggagatg
agttttgacccgaaggctaagatgcagcgtctgcaggagttctggatcagtcgagccagt
tctgagcagaggaaaggccgggctgggaggacaggacctggggtgtgttatcggctctat
tctgagtccgactacgaggctttcgcaccttaccccgtcccagagatacacagggtggcc
ctcgactctctagtactacagatgaagagtatgagtctgggagacccacgatcctttttg
ttcatcgaccctcctcccgcggccagtatccagactgcagtaacctacctcagggaacag
ggggcgctagacgctagaggagatctcacctctatcggaagcctgctggcacaacttcct
gttgacgtggtcataggtaagatgctggtgctggggtcagtgtttaacttggtggagccg
gtcctgacggtggctgctgccctcagtgttcagtccccatttctccgctcggcccaacac
aaccccgactgtgccacagcacgccagcccctgcactccaaccagggagaccccttcacc
ctgctcaacaccttcaacgcctgggtgcaggtgaagggggagagaggaggtgccagcagg
aagtggtgcaggaggagagggctggaggaacagaggctttatgagatggtcaacctacga
agacagttcaaggagctgttgcgtagtcatggtctgttggaggtgctggaggagagggct
ccctctggtggagagcgaggacagcgcagggagaggttgaccgagaggaggaagcttcat
cagctgaagagagaacatgacctggcagaggggggcaggaggaaggtcctgagactggag
gagggacaggatggggagggggattcggggtcggacacagagcagggcgccacgggacgg
gacgggaaggacaaggatcagaccggtggacacaacctggacatacaggaagtgaagttc
aagcttcgccacaacgtgtcagagctccaggaagcggcgtcggccagccaggacctgtcg
tcaaggcaacaagccctcctgaagctgctactttgtcgaggcctttacccccagctggcg
ttgccagacgaacacaatgctaaccgcaaggactcagaacaggtgttccacacccgtaac
aagcaaggggtagtgatccaccccaccagtgtgtttgccagcgacccagaggtgctgcac
gtccctgaggaggggaacagagaggggccagacaaaggggagagcagcaaacatcagctc
ctcgccttcgttactctacttgagaccaacaagccttatgtatccaactgtgtcagagtg
ccagccttacaggccctgttgctggtagctaactccttggacagtaatgctgactgtacc
aggctggtggtggatggctggttggaggtaggactgacaggagagggggctctgaaggtt
ctgtccacctccctcactctcagggccgactgggagcgcctcctgttagcccagctggga
cagggcactctgggggccggagcggggagcagggccaaggctgggaggggagaggggctg
ggggtacctgggctctcccgtaaagacctggagaaactcagtgaaggactggtccgcttc
ctgctatacactgaggtaagctacagtctacgtcgtttgacaggcctgcaggtacagaac
ctctacgtaggtccccaggcccagtccgagttctctgagccccatgccccaaaccccctt
ttccctgggatggaggcgcaacctgacaccatcaagggaggcctccaagtcaccaaatac
ttcacctacaactgcctcactgactctaaggacctctacagtgagtgtctacgtacgttc
tggtcctgtccccactgtgacctgtacagtcctgtcacaccgctggagaggatgagccac
gaggccacctgcaggccgcctggggaacagcaggacaaccaggacaaagagggtgatgat
gtgaaggcagcctcctcttccttctctgtttccagtctggccagagtctaccactgtgat
gtctgtgacaaggacctgacgctcacttctacagagatcctcaaacacaagagacagcac
atgcactctggacgttga
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