Oncorhynchus masou masou (cherry salmon): 135546934
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Entry
135546934 CDS
T10723
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135546934
Cell adhesion molecules [BR:
omm04515
]
Cadherins
Protocadherins
135546934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
Motif
Other DBs
NCBI-GeneID:
135546934
NCBI-ProteinID:
XP_064831563
LinkDB
All DBs
Position
10:complement(18074877..18078809)
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AA seq
970 aa
AA seq
DB search
MGFCWIRGVGECVVIAVLFYSVQSTTTRYCTYEEDAPGTEIGNLSQDLKIDPAEDPGTSF
RFMQETNSSVIQMREIDGLLAVGETIDREHLCPRSPRCFVTFDIVAFSKEKFQLIHVEIE
VKDINDNSPHFLHKETTLEISENVQVDSRFPLDIAVDHDVGNNYIQRYHISPSSHFIVDV
RSREDGVKYAELVLVKAMDREVEDSYTIEVTATDGGEPPRSGSMTVHIKVLDFNDNSPTF
EHNSLKVELYEDSPIGYQVLKVHAFDPDAGINGEVVYGFVEDTSSEAVRIFNVDRISGAV
TLKTLVDYDKQRSYELNIEASDLGTNSIPSTCKVVVDVVDVNDNAPEITIKPMTSTSDGV
AYITEAAAEESFVALISTSDSDSGSNGYVRSSLHGHDHFKLQQAYGDTFMIVTTTTLDRE
KIPEYNLTVVAEDLGTPPFKTVKQYTIRVTDENDNAPLFSKSIYEVSVLENNIPGSYITT
VVARDLDMGKNAKVSYKLIDSDVVGEASILTYVSIDPMSGSLYSLRSFDFETVQQIELTI
QADDKGSPQLSSTSMIRIKVVDQNDNYPYFTFPVMLNDSAEVPLPVNAPLGYLALWVKGQ
DEDEGMNGELSFRIVQGDSNLFSINKDTGEIALKQGLASAIGNVLEIKIAVSDNGRSPLS
SSATIRFVVTDSQLSDDQVVIVLRSTDEEDAGLDVSVVVIIMLGGGCALLLIAIVIVVIT
CKLNQGGKDQDSKRDVSHVLFDSRHHPRLNSAEPNMYGGPRGFLNERTSSSLDESSLYEE
KNGDLESQMFLPPKPFLPTSMWQGEKYCLQMSGIDQQSVKDSGKGDSDFNDSDSDISGDG
GKRNLSTFQPWAKSSFHAANTLAVDCQGTYCVIPTQSFQAPLDNAYTIGFSQAPVYNNPH
AYPHSWKDFGYSTSIPKARNTMQTFSHHTGTLPSYFAHQTRQSAAGLAEIQEHNQDITTV
ATISEVATIF
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgggattctgctggattcgaggagttggagagtgcgtggtgattgctgttctgttctac
tcggttcagtctacaactacgaggtactgcacttatgaagaggatgcgcccgggacagag
attggaaatctgtctcaggatttaaagatagacccagcagaggaccctggaacatctttc
cgcttcatgcaggagaccaattcgtctgtgattcaaatgagggagattgatggactttta
gcagttggggaaacgattgaccgagagcatctctgcccaaggtccccgcgatgctttgtc
accttcgacatagttgccttctccaaagaaaagtttcagctcatccacgtggagatcgag
gtaaaggacatcaatgataactcaccccacttcctccacaaagagacgacccttgagata
tccgagaatgttcaggtggactcacgattcccgttggacatcgctgttgaccatgatgtc
ggcaataactacatccaacgttaccatatctctccctccagccatttcatagttgatgtg
cgcagcagagaggatggagtgaagtatgctgaacttgtgcttgtgaaagcaatggacaga
gaggttgaagattcatacacaattgaagtgacggcaacagatgggggagagccacccagg
tccggatcaatgactgttcatatcaaagtgctggattttaatgacaacagcccaacgttt
gagcacaactcactaaaagttgaactttatgaggattcacccataggttaccaagtgctg
aaagtgcatgcgtttgacccagatgctggcatcaatggcgaggtagtgtatggatttgta
gaagacacgtcatctgaagcagtgcgcatttttaatgtagaccgaatttccggtgctgtg
actttaaaaacattggttgattatgacaagcagaggtcttatgaattgaacattgaagca
tccgatttaggcacaaattctattccatcgacctgcaaagttgttgtggatgttgtagat
gtaaacgataacgcaccagaaatcactatcaagccaatgacctcgacgagtgacggtgta
gcttacatcacggaggccgcagcggaggaaagttttgttgcgctgatcagcacctcggac
agtgactctggctcgaacggttacgttcgcagcagcctacacggccacgatcatttcaag
ctgcaacaggcctacggggacacttttatgattgtaacaaccaccactttagatagagag
aagatcccagagtataacctcactgtagtggctgaagacctcggaacaccacctttcaaa
acagtgaagcagtataccatcagagtgaccgacgagaacgacaacgcccccctcttcagt
aaatccatttatgaagtttctgtcctggaaaataatatccccgggtcatatataactact
gttgtagcacgtgaccttgacatgggtaaaaatgccaaagtatcatacaaactaattgat
tcagatgttgtgggtgaggcctccattttgacttatgtgtctatagacccaatgtcaggg
tcattgtatagtctgagatcttttgattttgaaaccgtccaacagattgaattaaccatc
caggctgatgacaagggatcacctcagctgtcaagcacatccatgatcagaatcaaagtt
gttgatcagaacgacaactatccctatttcacctttcctgttatgctgaatgattctgct
gaagttcctcttcctgtcaatgcaccactggggtacctggccctatgggtcaaaggtcag
gatgaggatgagggcatgaatggtgagctcagcttcagaatcgtacaaggtgactctaac
ctattttcaatcaataaagacactggagaaatagctctaaaacaggggctggcctctgcg
attggaaatgttttggaaatcaaaattgcagtgagtgacaatgggagatcccccctctcc
agcagtgccaccattcgctttgttgtcacagattcgcagctctcagacgaccaagttgtc
attgtactacgttcaactgatgaggaagacgcaggcttggatgtttcagtagtagttatc
atcatgctcggcgggggttgtgctcttctgctgattgccatagtgattgttgttatcaca
tgcaagttgaatcaaggagggaaggatcaagactccaagagagacgtgtctcacgtcctg
tttgactccaggcatcatcccaggctcaactctgcagaacccaacatgtacggtggacca
aggggtttcctcaatgaaaggacctcttcatctcttgatgagtccagcctgtatgaggag
aaaaatggagacttggagtcacagatgttcttgcctcctaagcctttcctaccaacatct
atgtggcaaggggaaaaatactgcctgcaaatgagtggcattgaccagcagagcgtaaag
gacagtggcaagggagacagtgacttcaatgacagtgactctgacatcagtggggatgga
ggcaagaggaacctcagcaccttccagccctgggccaaaagttccttccacgccgctaac
accctcgctgtggattgtcaaggcacttactgtgtaataccaacccaaagcttccaggcc
ccactagacaatgcatacacaattggattttcccaagcaccagtctacaacaatccccat
gcctatccccactcctggaaggactttggctacagcaccagcattcccaaagcaagaaac
accatgcagacgttctctcatcacacaggtacactcccctcttacttcgcccatcaaacg
agacaatctgctgccggacttgctgaaattcaggagcacaaccaagatattactacagtg
gcaaccatatctgaagttgccaccattttttaa
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