Oncorhynchus masou masou (cherry salmon): 135547067
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Entry
135547067 CDS
T10723
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04136
Autophagy - other
omm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135547067 (atg13)
04136 Autophagy - other
135547067 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135547067 (atg13)
03029 Mitochondrial biogenesis [BR:
omm03029
]
135547067 (atg13)
Membrane trafficking [BR:
omm04131
]
Autophagy
Autophagosome formation proteins
ULK complex
135547067 (atg13)
Atg1 complex
135547067 (atg13)
Mitochondrial biogenesis [BR:
omm03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
135547067 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
UL42
Motif
Other DBs
NCBI-GeneID:
135547067
NCBI-ProteinID:
XP_064831753
LinkDB
All DBs
Position
1:58156205..58165953
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AA seq
516 aa
AA seq
DB search
MMDSDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKVCTRSLSSPTGSDWFNLAIKDIP
EVTHEAKKALSGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYN
RLSLLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLTGLGEGFQTVRVGVVGTP
IGTITLSCAYRTNLAFMSTRQFERTAPIMGIIIDHFVERPFGNMGHMRPCNYRAPGEDEG
TYNGVEDSQEVCTTSFSTSPPSQLYCSRLSYQPPVLVGAADFCHPSTLNAANPHQVTTQM
GIPGKEGGVPQQVPVQPCHGAQAEHGRVSSCPPADHVTATPSSSGEGAETLSRSIEVKGV
SPCDVLETTFTRKVGAFVNKPGTQVTTASLDLPFAAFAPRAYDLEENDPMVQPPESPATS
SPLQGSLHSQGSGESGGPAQDDFVMVDFKPAFSKDDLLPMDLGTFYREFQNPPQLASLTI
DVSSQSMAEDLDSLPEKLAVYEKNIDEFDAFVDTLQ
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgatggacagtgatctaagtcctcaggataaaaaagacttggacaagttcataaagttt
ttcgctttgaagacagtgcaggttatagtccaagcgcgacttggggaaaaagtatgcacc
cgttccttgtcctcacctactggctctgattggttcaatctggcaatcaaagatatccca
gaagttacacacgaggcaaagaaagctctgtccgggcagcttcctggcatcggacgatcc
atgtgtgttgagatctccctcaaaacctcagagggagactcaatggaattggagacatgg
tgtctcgaaatgaacgagaagtgtgacaaagatattaaggtgtcctacactgtctacaac
cgcctgtcgttactgctcaagtcactgctggccattacaagggtaaccccagcctacaaa
ctctcacgaaagcaaggccatgactatgtcatactgtacaggatatattttggagaggtt
caactcacaggattgggagaagggttccagacagtgcgtgtaggagttgtgggaactccc
attggaacaatcaccttgtcttgtgcttacaggacaaacctggccttcatgtccaccagg
cagtttgagaggacggctccgattatgggcataattattgaccacttcgttgagcgcccc
tttggcaacatgggacacatgcgtccatgtaactacagagcacccggggaagatgaagga
acatacaatggggtggaagattctcaggaagtgtgcaccacgtccttctccacttctcca
ccctcacaactctactgctctcgtctttcttatcagcctcctgttcttgtcggagctgct
gacttctgccacccttccaccttaaacgctgccaacccacaccaggtaaccacccagatg
ggcatcccagggaaggaagggggcgtaccccagcaggtaccagtgcagccttgtcatggt
gcccaggcagagcatggacgagtgtcctcatgtccccccgctgatcatgttaccgccact
ccctccagcagtggtgagggtgcagagaccttgtcgaggagcattgaggtgaagggtgtc
tctccctgtgatgtactggagaccaccttcaccaggaaagtgggtgcctttgtcaacaag
ccaggcacacaggtaaccacagcaagcctggacttaccatttgcagcgtttgctcccaga
gcctatgacctcgaggaaaatgaccctatggttcagccgccggagtccccagccacgtcc
tctcccctgcagggcagtttacactcccagggctctggtgagagtggtggcccggcacag
gacgactttgttatggtggactttaagcctgcgttctctaaggatgacctgcttcccatg
gaccttggcacattctacagagagttccagaaccccccacagctcgccagcctcactatt
gatgtcagttctcagtccatggcagaagacctggactctcttcccgaaaaacttgcagta
tacgagaagaacattgatgaatttgatgcatttgtggacacattgcagtag
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