Oncorhynchus masou masou (cherry salmon): 135547068
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Entry
135547068 CDS
T10723
Symbol
si:ch211-269e2.1
Name
(RefSeq) cohesin subunit SA-2 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
135547068 (si:ch211-269e2.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omm03036
]
135547068 (si:ch211-269e2.1)
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
135547068 (si:ch211-269e2.1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
tRNA_bind_3
Cnd1
AHSP
Motif
Other DBs
NCBI-GeneID:
135547068
NCBI-ProteinID:
XP_064831750
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All DBs
Position
10:complement(5116897..5160569)
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AA seq
1190 aa
AA seq
DB search
MIAEPTVTSRSSVQNENLAVDANSSGAVNHTVGGARNENRQSLRGKRRARGGSENAKRRH
TKVTNGSLGRAQNRHLKHGDIEAVTLFEVVTMGRSAMQAVVDDWIEAYITDRDSGLLDLI
SFFIQCSGCKGLVTAEMFQSRQDDVMRKMVEELDEGSGLQYKKFLAFPWILTVTWPMDMD
SGEYPLTMSGPYWRRFRGEFCEFVSVLVTQCQYNVIFDSYLMDTLISLLTELSDSRVRAF
RHTCTLAAMKLLSSLIGVALSLSVSIENSQRLGEVERNKTSGRRNSPRLERIHRKTTELQ
DRRVEIENMMDAIFKGVFLKRYRDVLPEIRSMCMEELAVWMKLYSPVFLTDSYLKYMGWM
MHDKLPDVRLKCVLGLQGLYGDPLLLPKLDLFNSRFKDRMISMTLDKDHEVAVQTLRLLI
LISQSADEVINPEDYKQLFQLVYSSHRPLATTAGELLYTRLLNSPTPAPDLREGASEQDT
HTQLTTARVRALLHFYQDSELHQHVVYLVDSLWDCAGAMLKDWSSLTSLLLQDPSTQDAD
LSAGEQSLVVEVLVASVRQAVEGPLLAGRSTCKKVVSAREREKKSQVDDCGRLTEHFLKV
LPQLLIKYSGSPETVASLLKIPQYFHPDSPHAEFPQALSGLLAEMGAVLELHTDPAVLEA
AARSYLSLCGEETAWHPLARPGRDAVVQCWADRLAALLGDALQDGNFTADEEKTGEILST
LKKLTAFHNAQDLSRWGLYEQVFPLLSVEIIHGGLPTQLTVEALQCVSYSVLWNLNTSRE
TLTSREKAVAQRSQMRALCEKCLRCLSHNDQSVKEQAFLSLCDVLTAHNYQLQVWDPSSY
GPLLYTPDPKLQRALLAFILEHVFTGAEYDSHSRGGDVESGEGRLEELHRRRSLLAGFCK
LIVHGVLEMSMAADLFKYYMKYYNNFGDIIKETLSRTRQMDKIESARTLVLCLQQLFLRL
KQEQDSGVTCSSGVQTFSSIKELARRFSLTFGWDQTKSRESLTLIHRDGIEFVFQGFVQR
AEKPSPPYLSYLTILSEFSSKLLRPDKKIVYTYLQRYISEQIISNREECWLPLIYYRASL
LATGAEGEDAVSFISSDTLKQPSLANRSRSPSVRHSPTADGDLRSQSALTSTETKVRRLH
KASSSTSPEDRKPEVELGPIAREPPPTIVISEEPFHANEELDVDTVEVDL
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagaacctacagtcacctccaggtcctcagtacagaatgagaacttggctgtg
gacgcaaactcctctggagctgtcaatcacacagtgggcggagcacggaatgagaacaga
cagagtttgagagggaagaggagggcacgggggggctctgagaatgccaagcgcagacac
accaaggtaaccaatggcagtctgggtcgggcacagaacagacacctcaaacatggggac
attgaggccgtcacattgttcgaggtggtcaccatgggcaggagtgccatgcaggctgta
gttgatgattggattgaggcgtacatcacagacagagactctggcctcctggacctcatt
agcttcttcatccagtgttctggttgcaaaggtttggtgacagctgagatgttccaaagc
aggcaggatgatgtcatgaggaagatggtggaggaattggatgagggttcggggctgcag
tataaaaaattcctggctttcccctggatcctcacagtcacgtggcccatggacatggac
agtggggaatatcctctcaccatgtctggtccgtactggcgccggttccgtggtgagttc
tgtgagtttgtgtcggtgttggtaacccagtgtcaatacaatgtgatctttgacagctac
ctcatggacacactcatctctctgctcaccgagctgtccgactcccgtgtacgagccttc
agacacacctgcacattggcagcaatgaagttgctaagctctctgattggagtagccctt
agtctgagtgtgagtatagagaacagccagagactgggcgaggtggagagaaacaagaca
tcaggaagacgcaactcaccaagactggagagaatacacaggaagaccacagagctgcag
gatagaagggtggagatagagaacatgatggatgccatattcaaaggagtcttcctgaag
agataccgggatgtgctcccagagatccggtccatgtgtatggaagagctggctgtatgg
atgaaactttacagtccagtgtttctgactgacagctacctcaaatacatgggctggatg
atgcatgacaagctacctgacgtgcgtctgaagtgtgtgttggggctacagggtctgtat
ggagacccgctcctcctgcccaaactagacctcttcaacagccgcttcaaggacaggatg
atctctatgactctggacaaggaccacgaggtggcagttcagaccctgagactactcata
cttatctcccagtcagctgatgaggttattaatcctgaggactataagcagctgttccag
ttggtgtactcctcacatcgtcctctggcaaccactgcaggagagctgctctacacacgg
ctgctcaactcccctactccggcacctgacctcagagagggggcgagtgagcaggacaca
cacacacagctgacgacagccagagtgagggctctgctgcacttctaccaggacagtgag
ctccatcagcatgtagtatacctggtagacagtctgtgggactgtgctggtgccatgctg
aaggactggtcatctcttacctcgttactgctacaggacccctccactcaggatgcagat
ctaagtgctggagagcagtctctggttgtagaggtattggtggcatcagtacgtcaggca
gtagagggacccctgctggcgggaaggagcacatgcaagaaggtggtaagtgccagagaa
agagaaaaaaagtctcaggtagatgactgtggcagactcactgaacacttcctcaaggta
ctgccacaattgctgattaagtattcagggagcccagaaactgtggcatctcttttgaag
atacctcagtactttcacccagattcaccacatgcagaattcccacaggcgttgtcgggc
ctgctggctgagatgggagctgttttggagctccacactgaccctgcagtgctggaggcg
gctgctcgctcatacctcagcctgtgtggagaggaaacagcctggcaccccctggcacga
cctggcagagatgcagtggtccaatgctgggcagacagattggcagcactgctgggtgac
gcacttcaggatggcaacttcactgctgatgaggaaaagacaggagagattctatccaca
ctgaagaaactcactgctttccacaatgcccaggacctgtctcgttggggactgtatgag
caggtctttcctcttctctcagtggagatcattcacggtggattacctacacagctgaca
gtggaagctctgcagtgtgtatcttactctgtcctctggaacctcaacaccagtagagaa
accctgacctcacgggaaaaggctgtagcccagaggagtcagatgagagcattgtgtgag
aagtgtctacgttgtctgtcccacaacgatcagagtgtgaaggagcaggcattcctgtct
ctgtgtgatgtcttgacggcccacaactaccagttgcaagtgtgggatccctcgtcttac
ggccccctgctctacactcccgacccgaaacttcagagggcgctgcttgccttcattctg
gagcatgtcttcactggagcagagtacgacagccacagcaggggtggtgatgtagagtct
ggtgaggggaggttggaggagctccacagacgtaggagcttattggcaggcttctgtaaa
ctcatagtacacggggtgctggagatgagtatggctgctgatctctttaagtattacatg
aagtattataataactttggtgacatcattaaggagactctgagcagaacacggcagatg
gataagatagagagtgctcgcacgctggtgctctgtctgcaacagttgttcctgcgtctg
aagcaggagcaggacagtggagtcacctgtagctcaggtgtccaaacattcagcagcatc
aaggagctggccagacgcttctctctcaccttcggctgggaccaaacaaagtccagagag
tccctcactctgatccatagggacggtatagagtttgtttttcagggctttgtccagaga
gcagagaagccctctcctccatacctctcctacctcaccatcctcagcgagttctccagc
aagctcctcagaccagacaaaaagattgtttacacctacctacagaggtacataagtgaa
cagatcatcagtaacagagaggagtgttggctgccactcatctactaccgagcctcctta
ttggctactggggctgagggggaagatgctgtgtccttcatcagctctgatacgctaaag
caaccgtctctagccaatcgctcacgctctccctctgtcagacacagcccgactgctgat
ggagacctgaggtcccaatctgctcttacctctactgagaccaaagtaaggaggctccat
aaggccagcagcagtacaagcccagaggacaggaagccagaggttgagcttggtcccatc
gccagggaacccccgccgaccatagtgatatcagaggagccgttccacgctaacgaggaa
ttggatgtggacactgtggaggttgacctgtga
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integrated database retrieval system
