Oncorhynchus masou masou (cherry salmon): 135547110
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Entry
135547110 CDS
T10723
Name
(RefSeq) integrin beta-2-like isoform X1
KO
K06464
integrin beta 2
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04145
Phagosome
omm04514
Cell adhesion molecule (CAM) interaction
omm04517
IgSF CAM signaling
omm04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
135547110
04517 IgSF CAM signaling
135547110
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
135547110
09142 Cell motility
04810 Regulation of actin cytoskeleton
135547110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135547110
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omm04147
]
135547110
04515 Cell adhesion molecules [BR:
omm04515
]
135547110
04090 CD molecules [BR:
omm04090
]
135547110
Membrane trafficking [BR:
omm04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
135547110
Exosome [BR:
omm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135547110
Cell adhesion molecules [BR:
omm04515
]
Integrins
Integrin beta subunits
135547110
CD molecules [BR:
omm04090
]
Proteins
135547110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
I-EGF_1
vWA_SIBA-E
EGF_2
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
135547110
NCBI-ProteinID:
XP_064831867
LinkDB
All DBs
Position
10:10620378..10640065
Genome browser
AA seq
785 aa
AA seq
DB search
MTLEMYPCVSLLLLLMGRGAIPLVLSQEVKICSKTVINSCSDCIKSGAYCTWCKQLNFIK
PGEQEAARCDTWAQLIERGCMEEYITSPKNYFSSSKNISLSNTALEKGEPIQLRPQEVNL
KLRPGLPHTFTLDFQRVEGYPVDLYYLMDLSYSMEDDLRSIKTLGNELFNALQGITKKGR
IGFGSFVDKTVLPFTNTNPEKLKKPCAETEMYCQPAFGYRHVLSMTENKAEFESEVNKQR
ISGNLDSPEGTLDAIMQAAVCGERIGWRNSSTRLIVLTTDDGFHMAGDGKLAGILEPNDE
RCYMDNNLYSKSNEMDYPSVGQVANQLEKNNIQPIFAVTKNMEKVYRELSKMIPKSEVGV
LSADSHNVVELIKNAYNRLSSKVTVTHDALPDNVRVTYTPLCPEGGPSGDKGVCNNVGVG
QMVSFNVTVTADECMQSEMSFLIGPLGMKDKLKVSLSTLCKCECDSPVTVDSPYCNGKGQ
VNCGMCSCKAGFVGQKCECSIGEKDESSLRAACRKDNGTECEGRGDCVCGICQCYTLPGG
STYYGTNCECENESCEKFQNKLCGGNGKCRCKNCECKPGYEGTACQCKKSDEQCRTPSGS
VCSGRGTCKCNQCKCMEGYQRPYCLTCPACQTTCITKGKCIECLGFQTGPFSKNCSQACT
SISEFKMVETLPPGKPCDVRDVESCRVFFAIKQLDGEDNYTAQILKTRECPKLPNIYAII
GGSIVGVTVIGILILLFIKVLFTLKDLKEYRKFRKDAQKTKWSDNKNPIFQEATTTVANP
TFSGE
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgactcttgaaatgtatccgtgtgtgtctctcctgctcctgctgatgggcagaggtgcc
attcccctagtgctctcccaggaggtgaaaatatgttccaaaacagtaatcaactcctgc
agtgactgcatcaaatcaggagcgtactgcacgtggtgcaaacaactgaacttcatcaaa
ccaggggagcaggaagcagctcgctgtgacacctgggctcagctcatagaaaggggctgc
atggaagaatacatcacatctcccaagaattacttttcttcttctaagaacatctccctg
tccaacactgcattggagaagggggaacccatccagctccgtcctcaggaggtcaatctg
aagctcagaccaggactgcctcatacattcacgctggactttcagagagtggagggctat
cctgttgatctctactacctgatggatctctcctactccatggaggatgatttgaggagc
atcaagactctgggaaacgaactgtttaacgctctgcaaggcatcacaaaaaaaggacga
atcggttttggctcttttgtagacaagactgtcctgccgttcactaacaccaacccggag
aagctgaaaaagccatgcgccgaaacagagatgtactgccaacctgcttttggctacaga
catgttcttagcatgacggaaaacaaagccgagtttgagagcgaggtcaacaagcagcgc
atctctgggaacttagactcccccgaagggacgctggacgccatcatgcaggctgcagtc
tgtggggaaaggattggctggaggaatagcagcactcggcttatcgtcctgaccaccgac
gatggcttccacatggcaggggatggcaagctggctggcatactggagcccaatgatgag
agatgttacatggacaataacctgtacagcaagagcaatgaaatggactacccatctgtt
ggtcaagtggctaatcagttagagaagaacaacattcagccaatctttgctgtgacgaag
aacatggagaaggtatacagggaactcagtaaaatgatccccaagtctgaggtgggagtg
ttgtccgctgactcccataatgtcgttgaactgatcaaaaatgcctacaataggctctcc
tccaaagtgacggtgactcatgatgctctccctgacaacgtgagagtcacttacactccg
ctctgtcctgaagggggaccctcaggggacaaaggagtgtgtaacaatgtgggagtggga
cagatggtgtctttcaatgtaacagtgacagcggatgaatgtatgcagagtgaaatgtct
ttcctgattggtccgttgggtatgaaggacaagctgaaggtgagcttgtcgactctctgc
aagtgtgagtgtgacagccctgtgacggtcgattccccgtactgcaacgggaagggccaa
gtcaactgtggcatgtgcagttgcaaagccggcttcgtgggccagaaatgtgagtgctcc
atcggggagaaggacgagagctctctgagagcagcgtgccggaaggacaacggcacggag
tgtgaaggacgaggggactgtgtgtgtggcatttgccagtgctacaccttaccaggtggc
agcacctactacggcacaaattgcgagtgtgaaaacgagagctgcgagaagttccagaac
aaactgtgtggagggaacggaaaatgccgttgcaaaaattgcgaatgcaaacccgggtac
gagggcaccgcctgccaatgcaagaagtcggacgagcagtgtcgcacaccaagcgggagt
gtgtgcagcggcaggggcacgtgcaagtgtaaccagtgcaagtgtatggagggataccag
cggccctactgtctgacctgtcccgcctgccaaaccacctgtataaccaaggggaaatgc
attgagtgtctgggctttcagacaggcccattcagtaagaactgctcccaggcctgtacg
agtattagtgaattcaagatggtggagacattgccacctggtaagccttgtgatgtgagg
gatgtggagagctgccgggtgttctttgccattaaacagttggatggagaggacaactac
accgcccaaatactaaagaccagagagtgtcccaagttgccaaacatctatgccatcatt
ggaggctccatcgtaggcgtgactgtcatcggaatcctgatcctgctcttcatcaaagtc
ctcttcacattgaaagacctgaaggagtaccgcaagtttagaaaagacgcgcagaaaacc
aagtggtcagataataagaatccaatattccaggaggcaaccaccaccgtggctaaccct
acctttagtggagagtaa
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