Oncorhynchus masou masou (cherry salmon): 135547220
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Entry
135547220 CDS
T10723
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04145
Phagosome
omm04814
Motor proteins
omm05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
135547220
09142 Cell motility
04814 Motor proteins
135547220
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
135547220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omm03036
]
135547220
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omm04812
]
135547220
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
135547220
Cytoskeleton proteins [BR:
omm04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
135547220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML
WDR55
Dynein_IC2
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_NUP159_NUP214
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
135547220
NCBI-ProteinID:
XP_064832080
LinkDB
All DBs
Position
10:15441615..15463522
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AA seq
628 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEDERKKKEADLKKDAAPLDDSDLEKKRRETDA
LLQSMGITSADAPVVPPPMSPTSKSVGTPSEAGSQDSGDGAVGSRTLHWDSDPSTLQLHS
DSELGRGPLKLGMAKITHVDFPPKETVSYTKETQTPVTTQQKEEEDDEEEIAPPQPVLEI
QMEKTDQKEEEEAPPQELTEEEKLQILHSSEFITFFDHSTRIVERALSQHVDVFFDYSGR
EMEEKEGEIQAGAKLFLNRQFADERWSKHRVVTCLDWSPQYPELLVASYNNNEEAPHEPD
GVALVWNMKYKKNTPEYVFHCQSAVMSVAFARFHPNLVVGGTYSGQIVLWDNRSNKRTPV
QRTPLSAAAHTHPVYCVNVVGTQNAHNLISISTDGKMCSWSLDMLSQPQDSLELVFRQSK
AVAVTSMSFPLGDVNNFVVGSEDGSVYMACRHGSKAGISEMFEGHHGPITGIDCHTATGP
VDFSHLFVTSSFDWTVKLWSTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGVGHLD
LWNLNNDTEVPTASTTVEGNPALNRVRWAHSGKEIAVGDSDGQILVYDVGEQIAVPRNDE
WTRFVRTLAEINENRDDAEELAAQRLSA
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaaaagcgagctgaaagcggagcttgaacggaagaagcaacgcctggctcag
atcagggaggagaaaaaaaggaaggaagatgagcgcaaaaagaaagaggctgacctgaag
aaagatgccgccccactggatgactctgatttggagaaaaagagacgtgagacagatgcc
cttctacagagcatgggcatcacatcagctgatgcccctgttgtccctcctcccatgtcg
ccaacctccaaatctgtgggcacaccaagcgaggcagggagccaagactcgggcgacggc
gccgtgggatccaggactctacactgggactctgacccgtctactcttcagcttcactct
gactccgagctggggcgtggacctctgaagctgggcatggccaagatcacccatgttgac
ttccctccaaaagagacggtgtcgtacaccaaggagacccagacgcctgtgaccacccag
cagaaagaagaggaagacgatgaggaggagatcgctccaccacaaccagtgcttgagatc
caaatggagaaaacagaccagaaagaggaggaggaagcacctccacaggagctgactgag
gaggagaagctgcagatcctccactcctcagagttcataaccttctttgaccacagcacc
cgcatcgtggagagggccctgtcccaacacgtggacgtcttcttcgactacagtggccgg
gagatggaggagaaggaaggtgagatccaagctggggccaagctgtttctgaacagacag
tttgcggacgagcgctggtctaagcatcgcgtggtcacctgtctggactggtcccctcag
tatcctgagctgctggttgcctcatacaacaacaacgaggaagccccccacgagccggac
ggggtggccctggtctggaacatgaagtacaagaagaacacgccggaatacgtcttccac
tgccagtctgcagtgatgtcggtcgcttttgccaggttccaccctaacctggtggtgggg
ggcacctactcggggcagatcgttctgtgggacaacaggagcaacaagaggacccccgtg
cagaggacccctctgtcagcagcagctcacacgcacccagtgtactgtgtgaatgtggtg
ggcacccagaatgcccacaacctcattagcatctctaccgatggcaagatgtgttcctgg
agcctggacatgctgtctcaaccgcaggacagcctggagctggtgttcaggcagtcgaag
gccgtcgctgtcacctccatgtctttccccctcggagatgtcaacaactttgtggtgggg
agcgaggacgggtccgtctacatggcgtgtcgccatggaagtaaagcagggatcagtgag
atgtttgagggccaccacgggcctatcacagggatagactgtcacacagcgaccgggccc
gtcgacttctcccacctgtttgtcacctcctcctttgactggaccgtcaagctgtggagc
accaagaacaacaagccactgtactcgttcgaggacaactcggattacgtctatgacgtc
atgtggtcccccactcacccggctctgttcgcgtgtgtggatggagtgggccatcttgat
ctgtggaacctcaacaacgacactgaggttcctacagccagtaccacagtggaggggaac
ccagccctgaaccgcgtgcgctgggcccactctggcaaagagatagccgtgggagactct
gatggacagatcctggtctatgatgttggagagcaaatcgctgttccacgcaacgacgag
tggacccgttttgtccgaaccctggcggagatcaacgagaaccgggatgacgccgaggag
cttgccgctcagcgcctctctgcttga
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