Oncorhynchus masou masou (cherry salmon): 135547240
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Entry
135547240 CDS
T10723
Symbol
stxbp5l
Name
(RefSeq) syntaxin-binding protein 5-like
KO
K08518
syntaxin-binding protein 5
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135547240 (stxbp5l)
Membrane trafficking [BR:
omm04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
135547240 (stxbp5l)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
135547240 (stxbp5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR19_1st
Lgl_C
Beta-prop_VPS8
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
Synaptobrevin
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
135547240
NCBI-ProteinID:
XP_064832110
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All DBs
Position
10:16139163..16379873
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AA seq
1176 aa
AA seq
DB search
MKKFRKVLDGLSSSSPGGVASPSCGSAAGTPTAHAPTPQDIHVQETLVSENFQICKTVRH
GFPYQPTCLAFDPVQKILAIGSRTGGIRILGRPGVDCYSQHESGAAVLQLQFLINEGALV
TACADDTLHLWNLRQRRPAILHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNIESF
VLSGYVIMWNKAIELATKAHPGPVVHLSDSPKDEGKLLIGFESGTVVQWDLRAKKVDFRI
YYDEAIHSVSWHHEGKQFMCSHSDGSLTMWNLRNTARPIQITYPHGKILKDGRKESCKPI
LKVEYKTSRNSSEPYVIFSGGLSYDKSGGRRPTLTIMHGKAITVLEMDHPIVEFLVLCDT
PYSNEVQDPYAVVVLLEKDFIVVDLTQSNFPIFENPYPMDIHESPVTCTAYFAECPPDII
PILYSIGAKQKKTGYSHKEWPVSGGTWTLGSQTYPEIIVTGHADGTVKFWDASAITLQML
YKLKTSKVFEKPKAGEGRAGELVEEDPYAVQMVSWCPHSRLFCVVGISAHVILYRFSKHD
ANTQIVSLEVRLQFDPEDVISPSEAENNPCFSDPSSHSPQPPGSPGSGTQDSLPCLKVKS
RPVRMPPGYQAEMVVQLQWVDGEPPQQITSLDINSAYGLLAFGNCNGLTVVDFLQKTILM
CMGTLDLYGAADPYQRLTRSPRKNRQSTSDFCMRGLSHFYSDSKKRIRTSYQSLTELSDN
QVSMDIERSKSPTSDHVNGHCTSPTSQPCSAGKPRITGVPEGPRLTRRGPGRPPFRKAQS
AACMEISLPVSSHTEESRENSFSRSRSSSVSSIDRDTKESVTTLQFGESYGRKGDALPTA
CLWVGTSLGVVLLLPISIPTEEEERMEEPITMGPSGTVLMLKGSVLRFAFLDCGGALIQS
PYEVWRDPNGPEDPDRPRRRKLINFSPSSSQEACGDGHLAVVCSEKQAKVLLMPTQAVLF
THNITESSFLLRADVVSICNSVCLACFCANGHIMTLSLPSLRPLMDINYLPLTDLRIART
FVFTNGGQALYLSSPTEIQRLTYSQEMTDNLQDMLGELFTPIETPEAQNKGFLKGFFGGN
AQTFDREELFGEAAAGKASRSLAQHIPGPMGLENMKAAAGGVVGDLARARIALDQRGERL
GELEERTALMMNSAETFSTHAHQVMLKHKDKKWYQL
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttcgaaaggtactggacggcctgtcatcctcctccccggggggtgtcgcg
tccccctcgtgcggcagtgcagctggtaccccgaccgctcacgcgcccactccccaggat
atccatgtccaggagacgctagtctcggaaaactttcagatatgcaagacggtacgccat
ggcttcccgtaccagcccacctgcctggcctttgatcccgtccagaagatcctggccatc
ggctccagaacaggaggcattcggatcctgggacggcctggtgtggactgctatagccag
catgaaagtggagccgctgtcctccagctacagttcctcatcaacgagggggcgctggtt
acggcatgtgcagacgacacgctacacctgtggaaccttcgccagagacgcccagccatc
ctgcactcgcttaaattcaacagggagaggatcacgttttgccacctccccttccagagt
aaatggctgtacgtgggcacagagcgtggcaatacacacatcgtcaacatcgagtccttc
gttctgtctggatacgtcatcatgtggaacaaggccatagaattagcaactaaagcacat
ccagggcccgtggtccatctgagtgacagcccgaaggatgaaggcaagttgctgataggg
tttgagagtggaacagtagtccaatgggacctccgagccaagaaggttgacttcagaatc
tactacgatgaggctatccattctgtgagctggcatcacgaggggaagcagttcatgtgc
agccactcagatggcagcctgactatgtggaacctgagaaacacagccaggcccattcag
atcacctaccctcacgggaagatactgaaggacgggaggaaagagtcgtgtaagcccatc
ctcaaggtggaatacaagacctccaggaacagcagtgagccctatgtcatcttctctggg
ggtctgtcatatgacaagtccggtggaaggaggcccaccctgaccatcatgcacggcaag
gccatcacagtgctggagatggaccaccctatcgtagagttcctagtgctctgtgacacc
ccatactccaacgaggtccaggatccttatgcagtggttgtgcttttagaaaaggacttc
atcgtggtggatctgacacagagcaacttccccatctttgagaacccctacccaatggac
atccacgagtctcctgtcacctgtacggcttacttcgctgagtgccctcctgacatcatc
cccatcctctactccataggggccaagcagaagaagactggctacagccacaaggagtgg
ccagtgagcggtgggacatggacactaggctcacagacctacccagagatcatcgtcaca
ggacacgcagacggaaccgtaaagttttgggacgcctctgctattacactgcagatgctg
tacaagctgaagacgtccaaggtgtttgagaagcccaaggcgggagagggtcgggcgggc
gagctggtagaggaggacccctacgccgttcagatggtcagctggtgcccacatagccgt
ctcttctgtgtggtgggcatttctgcccacgtcattctctaccggttcagcaaacacgac
gccaacacgcagatagtgtcactagaggtgcgcctgcagtttgatccagaggacgtcatc
tccccgtcagaggcagagaacaacccgtgtttctcggatcccagttcccactccccccag
ccacccggtagccctggcagtggcacacaggacagcctcccctgcctcaaggtgaagagt
cgtccagtgcggatgcccccggggtaccaggctgagatggtggtgcagctgcagtgggtg
gatggagagcccccccagcagatcaccagcctggacatcaactctgcctacggcctccta
gcgtttgggaactgtaatggtctaacggtggtggacttccttcagaagacgatcctgatg
tgtatgggcacactggacctgtacggagccgcagacccctaccaacgactcacacgctcc
ccacgcaagaacagacagtccacctcagacttttgcatgcgtggcctgtctcacttttat
tcagattcaaagaaaaggatccgtacgtcctatcagagccttacagaactctccgataac
caggtatccatggacatcgagagaagcaagtcacccacctcagatcatgtcaatggacat
tgcactagtcccacctcccagccctgctccgcggggaagcctcgcatcacaggggttccc
gagggcccgcggctcacccggagagggcctggccgaccgcccttccgcaaggcccagtcc
gccgcttgcatggagatctctttgcctgtttcctcccacacagaagaaagtagagagaac
tcattcagtcgctcgcggagctccagtgtgtccagcattgatcgcgacaccaaggagtca
gtgaccacgctgcagttcggagagtcctacggccgtaagggcgatgctctgcctaccgcc
tgcctgtgggtgggcaccagcctgggcgtggtcctgctcctgcccatatccatccccaca
gaagaggaggagaggatggaggagcccatcaccatggggcccagtggtaccgtcctgatg
ctaaaaggctctgtgttgcgatttgccttcctggactgtgggggcgctctcattcagagt
ccctacgaggtgtggcgggaccccaacggtcccgaggaccccgaccggccccgcaggcgc
aagctgatcaacttctccccgtcatcatcccaggaggcgtgcggtgacggtcacctggcc
gttgtgtgctctgagaagcaggccaaggtcctcctcatgcccacccaggctgtcctgttc
acccacaacatcaccgagtcctccttcctcctgcgggctgacgttgtctccatctgcaac
agcgtctgcctggcctgcttctgcgccaacggacacatcatgaccctaagtttgcccagt
ctaagacccctgatggatatcaactaccttcccctgaccgacttgcgtatcgcccggacc
tttgtcttcactaacggaggccaggccctgtatctgagctctcctacagagatacagcgt
ctcacatacagccaagagatgacggacaacctacaggacatgctgggggagctgttcact
cctatagaaacaccagaggcccagaacaaaggattcctcaagggtttctttgggggcaac
gcccagacctttgacagagaggagctgtttggggaggcagcagcgggaaaggcctctcgg
agtttggcccagcacatccctggcccaatgggattggagaacatgaaggctgcagccggc
ggcgtcgtgggggacctggcccgagcccgcatcgccctggaccagagaggagagagactg
ggcgagctggaggaacgcaccgccctcatgatgaacagcgccgagaccttctccacacac
gcccaccaggtgatgctgaaacataaggacaagaaatggtatcagctttaa
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