Oncorhynchus masou masou (cherry salmon): 135547269
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Entry
135547269 CDS
T10723
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135547269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135547269
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135547269
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
135547269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
PRY
zf-RING_2
Ig_DSCAM-DSCAML_C
zf-C3HC4_3
Pur_ac_phosph_N
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
135547269
NCBI-ProteinID:
XP_064832159
LinkDB
All DBs
Position
10:complement(18217322..18277944)
Genome browser
AA seq
691 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCTPNEPVQSISAFQCPTCR
YVITLSQRGLEGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAALDSTVMTSPSERVQ
CQFCEQDPPQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPMPDCHLRGLMCLEH
ENEKVNMYCVTDEQLICALCKLVGRHRDHQVAALSDRYEKLKRTPDCYLSERSEQEETDQ
VIYTQALDSNLSNLIKRNNELETMMGKLIQTCQHVECNASRQENKLLEECDLLIDIIQQR
RQMIATKIKEGKAIRLRKLAQQIASCKQIIERSSSLITQADHTLKETDHARFLQTAKSIC
ERVSMATASSQILIPEINLNDTFDTFALDFTREKKMLESLDYLTAPNPPIIRAELCTASN
DTITVHWTSDDEFCVVSYELQYAIFTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQCG
TKYMFIVKAINQAGSRSSEPWKLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETLSKKS
HTQDRFTSQGSYGVTGNVYIDSGRHYWEALIGGSTWFAVGVAYKSAPKHEWIGKNSASWV
LSRCNTSWVVRHNSKEMPIEPSPHLRRVGVLLDYDAGSLAFYDGAGSQHLYTFDIAFAQP
VCPVFNVWNKCLTVLTGLPIPDHLEGTDCRD
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagctgacctgcccaatctgtctggagctcttcgaggaccca
ctgctcttgccctgcgctcacagcctgtgtttcaactgtgcccaccgcatcctagtctcc
cactgcacccccaacgagcctgtgcagtccatcagcgccttccagtgcccaacctgtcgc
tatgtcatcaccctcagccagaggggcctagaaggactgaagcgtaacgtcactctgcag
aacatcattgaccgctttcagaaggcttccgtcagcgggcccaactcccccagtgagact
cgccgcgagagggccgccctagacagcacggtcatgacctcccccagcgagagggtgcag
tgtcagttctgtgagcaggaccctccccaagacgccgtcaagacctgtgtcacctgtgag
gtgtcctactgcgacgaatgcctgaaggccacccaccccaataagaagcccttcactggc
caccgtctgatcgagcccatgccggactgccacctcaggggactcatgtgtctggagcac
gagaacgagaaggtgaacatgtactgtgtcacagatgaacagttgatctgtgccttgtgc
aaactggtcggtcggcatcgggaccaccaagtagcagcactcagcgaccgctacgagaaa
ctgaagagaactccagactgctatctcagtgagaggagcgaacaggaggaaacagatcag
gtgatatatacgcaagccttggactctaacctcagcaatctaatcaagaggaacaatgag
ttggaaactatgatgggcaagttgattcagacttgccaacatgtggagtgcaacgcatca
agacaagagaacaaactccttgaagaatgtgacctcctgatcgacatcatacagcagaga
aggcagatgatagccaccaagataaaggagggcaaggctatacggctgcgaaagctagcc
cagcagatcgccagctgcaagcagataattgagagatcgtcgtccctcatcactcaagct
gatcacaccctcaaggagacagaccatgcccgcttcctgcaaacagccaaaagcatctgt
gaaagagtgtccatggcaacagcatcctctcagatcctgataccagagatcaacctaaat
gacacctttgatacgtttgcgttggacttcacaagggaaaagaaaatgctggaaagcttg
gattacctcacagcaccaaatcccccaataatccgggcggaattatgtacggcatcgaac
gacaccatcactgttcactggacgtctgatgacgagttctgtgtggtctcctatgagctt
cagtatgccatcttcaccggacaagccaatgttgtcagtttgtgtaactcggctgatagc
tggatgattgtgcccaacatcaagcagaaccactacacggtgcatggactccagtgtggc
accaagtacatgttcatcgtcaaggccatcaatcaggcagggagtcgcagcagtgagcct
tggaaactcaagaccaacagtcaaccattcaagttggacccaaagtctgctcacaagaag
ctgaaggtctcccatgacaacctgacagtggagcgagacgagacgttgtccaagaagagc
cacactcaggaccgcttcaccagccagggcagctacggcgtcacagggaatgtgtacatc
gacagcgggcgccactactgggaggccttgataggagggagcacatggtttgctgtgggc
gttgcttacaagtcagcaccgaaacatgagtggatcggcaagaactctgcctcgtgggta
ctgtctcgctgcaacacctcctgggtagtacgtcacaacagcaaggagatgcccatcgaa
ccgtccccccacctgcgtcgcgtgggggtgttgctggactacgatgctggctccctggcc
ttctacgacggcgccggctcacagcacctgtacacgttcgacatcgccttcgctcagcca
gtctgtcccgtgttcaacgtgtggaacaagtgtctgaccgtcctcacagggctgcccatc
ccagaccacctagagggaacagactgccgggattaa
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