Oncorhynchus masou masou (cherry salmon): 135547313
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Entry
135547313 CDS
T10723
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omm01002
]
135547313
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135547313
Enzymes [BR:
omm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
135547313
Peptidases and inhibitors [BR:
omm01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
135547313
Ubiquitin system [BR:
omm04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
135547313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
RasGEF_N
FAST_1
Motif
Other DBs
NCBI-GeneID:
135547313
NCBI-ProteinID:
XP_064832261
LinkDB
All DBs
Position
10:complement(21239219..21326017)
Genome browser
AA seq
2650 aa
AA seq
DB search
MTATTRGSPVGGNDNQAGQAPDAPSQSQPPLPQNQTVSPNSTNENSPVSPPDEQGQGDGP
PQLEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIELSKKGLDVKCEACQ
RFFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMA
TNPHCKFHIYNGTRPSETVPAGVQLADDELFARPPDPRSPKGWLVDLINKFGSLNGFQTL
HDRFIGGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLSVIEMVPQFLENLTDEELKKE
AKNEAKNDALSMIIKSLKNLASRVPGQEETVKSLEIFRLKMILRLLQISSFNGKMNALNE
VNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKIL
RFVIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWT
NASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILD
YSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKIPINIQT
NLAGQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMETMRQFSKAEQAEFDPQTVR
AGSRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYAA
IINIITSKGYSKLMGDEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCRE
GKLVAKRRAYMMDDLELIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQVNQVEI
HEDFIQSCFDRLKASYDTLRVLDGDKDSINSARQEAIRMVRVLTVLKEYINECDSDYHEE
RTILPMSRAFRGKHITLTVRFPNQGRQVDDLDIWSHTNDTIGSVRRGILTRIKANATHTK
IELFIGGDVVDPADDRKLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHG
NHFSDGPNPEVESCLPGVIMSLHLRYISFLWQVADLGCGINMPLLRDGARVLMKLMPPDN
STVEILRAMCLDHAKLGENSLSPTLDSRFFGPSPSQVLYLIEVVYALLMPASATLGEDAS
DFQYNFLKSGGLPLVLSMLTRNNFLPSADMETRRGAYLNALKIAKLLLTAVGFGHVKAVA
EACQPNAEGNIPVSPINQATHDQALVLQSALQNIPNPASECMLRNVAIRLAQQISDENFF
QASKYIPDICVIRAVQKIVWASGCGTVQLVFSSNEEISKIYEKTNASKEPDGEDEQVCCE
ALEIMTLCFSLLPTALDTLSKEKAWQTFIIDLLMHCHSKSVRQMAQEQFFLMATRCCMGH
RPLLFFITLLFTVLGSTAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWL
KRIRDEVKRTGETGVEETILEGHIGITKELLAFQTSEKKYYIGCEKGGANLIKELIDDFI
FPASNVYLQYMKSGEFPTEQAIPVCSSPASINAGFELLVALAVGCVRNLKQMVDTLTDMY
YLGCEALTEWEYLPPVGPRPTKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTG
TDVDDDMSGDEKQENESNVDPRDEVFNYHHQFDDKPSLSKSEDRKEYNIGVLRHLQVIFG
HLASSRLQYYIPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSK
VLGGSFADQKICQGCPHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCE
KCNKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGV
AKLEGDDVNPENQVIQQNEPSEPEPPGSSKYRLVGVLVHSGQASGGHYYSYITQRNVGGA
DGERNRWYKFDDGDVTECKMDDEEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYI
LFYERMDSLDKDSELVKYIQELTISSSSNNKPPHQVKMPGVIECSVRKQNVQFMHNRMQY
SLEYFQFVKKLLTCNSVYLNPPPGQDHLLPEAEEMAMISVQLAAKFLFSTGFHTKKVVRG
PASDWYDALCVLLRHSKNVRYWFAHNFLFAYTNRFSEYLLECPSAEVRGAFAKLIVFIAH
FSLQDGPCPSPTASPVGASTQPQACDNLSLSDHLLRTVLNLLRREVSEHGRHLQQYFNLF
VMYANLGLAEKTQLLKLSVPATFMLVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVA
ARMQSSINGNPPLPNPYGDANQTTPVMPVQQLVGEILFVRTSYVKKIIEDCSNSEETVKL
LRFSCWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGI
PDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWL
GDELERRPYTGNPQYTYNNWSPPVQSNETSNGYFLERSHSARMTLAKACELCPEECHLTK
HGEAVSEEDAAMRKSSSPQQLLPGEGTGQQHTEPDDQEAPEDQDTSPPDDISLYPHLSPG
TTTQFQQQNNHPHGQPYTGPAAQHMNNPQRPVPSSAPGPAPGTGPQAQDNWESTEEVPST
TSLAPAPPKE
NT seq
7953 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccacgcgtggctctcctgttgggggaaacgacaaccaggcaggccaggca
cccgacgctccgagtcagagccagcccccgctgccacagaaccagacggtgtcccctaac
tccaccaatgagaactctccagtgagccccccggatgagcagggtcagggggacggcccc
ccccagctggaggaggaggagcctgccttccctcacacagacctggccaagctggatgac
atgatcaacagaccccgctgggtggttccagttcttccaaagggagagttagaggttctt
ctagaagctgctatagagcttagtaaaaaaggacttgatgtgaagtgtgaggcgtgccag
aggtttttccgagatggcctgaccatctccttcaccaagatccttacagacgaggccgtc
agcgggtggaaatttgagatccataggtgtatcatcaacaacacacaccggctggtggag
ctgtgtgtggccaagctttctcaggactggttccccttgctggagctgctggccatggcc
accaacccccactgcaagttccacatctacaacggcacacggccctctgagacggtgcct
gccggggtgcagctggccgatgacgagctcttcgcccgcccccctgaccctcgctccccc
aagggctggttggtggatttaataaacaaatttggctcgttaaatgggtttcaaacactg
cacgatcgcttcataggtggccaagcactgaacgtccagatcatcgccgcacttatcaag
cctttcgggcagtgttacgagttcctcacgttgcacacggtgaagaagtacttcctgtcc
gtcatcgagatggttcctcagttcctggagaacctgacagatgaggagctgaagaaggag
gccaagaacgaagccaaaaatgacgccctatccatgatcatcaagtccctgaagaacctg
gcctccagggtgcctgggcaggaggagaccgtgaagagtttagagatttttaggttaaaa
atgattcttaggttattgcaaatttcctcttttaatggcaaaatgaatgcactaaatgaa
gtaaacaaggtaatctcaagtgtgtcctactacacacatcgacatggcaaccctgaggag
gaggagtggcttactgcagaacgcatggcggagtggatccagcagaaccacatcctgtcc
atcgtgctgagggacagtctgcatcagcctcagtacgtagaaaaactagagaagatactt
cgcttcgtcatcaaagagaaagctcttaccatgcaggacctggacaacatctgggctgca
caggctggtaaacatgaggccatcgtgaagaacgtccatgacctcctggccaagctggcc
tgggacttctcccctgagcagctcgaccacctttttgactgcttcaaggcgagttggaca
aacgctagtaagaagcagcgtgagaagctgctggagctgatccgtcgtctggcggaggat
gacaaggatggagtgatggcccacaaggtgctgaacctgttgtggaacctggctcacagc
gatgacgtgcctgtagacatcatggaccaggccctcagtgctcacatcaagatactggac
tacagttgctctcaggatcgagacacgcagaagatccagtggatcgatcgcttcatagaa
gagttgcgcaccaatgacaaatgggtgattcctgcactaaagcagatccgagagatctgt
agcctgttcggagaggctcctcagaatctcagaaagaaaattcctattaacatacaaacg
aacttagcgggtcagactcagaggagtcctcatgtgttctatcgtcatgacctgatcaac
cagctccaacacaaccatgccctggtcacgctggtggctgagaacctctctgcctacatg
gagaccatgaggcagttctctaaagccgagcaggcagagtttgacccccagacggtgagg
gcagggagccgctacagccacgtacaggaagtccaggagagactcaacttcctgaggttc
ttgctgaaggatggccagttgtggctctgtgctcctcaggccaaacagatctggaagtgc
ctggccgaaaacgctgtcttcctatgtgatagagaggcctgcttcaaatggtacgctgcc
atcatcaatattatcacctcgaaagggtactccaagctgatgggagatgagccagacctg
gacccagacattaacaaggacttctttgagaacaacgtcctccagctggacccgtctctg
ctcacagagaacggcatgaagtgcttcgagaggttcttcaaggctgtcaactgtcgggag
ggaaagctggtggccaaacgcagggcctacatgatggacgacctggagctcataggactg
gactacctctggagggtcgtaattcaagggagcgatgacatcgccagtcgagccatagac
ctgctgaaagagatctacaccaacctcggaccaaaactacaagtcaatcaggtagagata
cacgaggatttcatccagtcgtgcttcgaccgtctgaaggcgtcgtacgatacgctgcgt
gttctggacggggacaaggacagcatcaactcggcccggcaggaagccatccgcatggtc
cgcgtgctcactgtgctcaaggagtacatcaacgagtgtgacagcgactaccatgaggag
aggaccatactgcccatgtccagggcgttccgggggaagcacatcacgttgaccgtgcgt
tttcctaaccagggccgtcaggtagatgacctggacatctggtctcacaccaacgacacc
atcggctcggtgcgccgtggcatcctcacacgcatcaaggccaacgccacgcacaccaag
atagagctcttcattggcggggatgtcgtcgacccagctgacgacagaaagctgattggc
cagctcaacctcaaagacaaaacgttgatcacagccaagctgacccaggtgagtgccaac
atgccgtccagcccagacagctcctcggactcttccaccggctcacctggtaaccacggc
aaccacttcagcgacgggcccaacccagaggtggagagctgtctccctggagtgatcatg
tctctccacctgcgctacatatctttcctgtggcaggtagcggacctgggctgtggcatt
aacatgcctctgttacgagatggagccagggtactcatgaagctaatgcctccagataac
agtaccgtggagatcctgcgtgccatgtgtctggaccatgccaagctgggagagaacagc
ctcagccccacactggactcgcgcttctttggcccctcgccatcacaagtcctctacctc
atagaggtggtgtatgccctactcatgccagccagcgccacactgggggaggatgccagc
gacttccagtacaacttcctgaagagtggcgggctgcctcttgtactgagcatgctcaca
cggaacaacttcctgccttcggccgacatggagacacggcgaggggcgtacctcaacgct
ctgaagatcgccaagctgctgctcaccgccgtggggttcggacacgttaaagctgtggcc
gaggcctgccagcccaatgctgaggggaacataccagtctcaccgatcaaccaggccact
catgaccaagccctggtcctccagagtgccctgcaaaacatccccaaccctgcctcagag
tgtatgctccgcaacgtagctatacgcctggctcagcagatctctgacgagaacttcttc
caggcgtccaagtacatcccagacatctgtgtgatccgggcggtgcagaagatagtgtgg
gcgtcgggctgtggcaccgtacagctagtctttagctccaacgaagagatcagcaagatc
tacgagaagacgaatgcgtctaaggagccggacggggaggatgagcaggtgtgttgtgag
gccctggagatcatgaccctgtgtttctccctgctgcccaccgctctggacacactcagc
aaggagaaggcctggcagaccttcatcatagacctgctaatgcactgccacagcaagtca
gttcgtcagatggcccaggagcagttcttcctcatggccaccaggtgttgcatgggccat
cgaccccttctcttcttcatcaccctcctcttcactgtgctggggagcaccgctaaggag
cgggccaagcatgctggggactacttcaccctgctcaggcacctcctgaactatgcctac
aacagcaacatcaacctgcccaatgcagaggtgctgctcaacaatgaaatcgactggctc
aagaggatcagggatgaggtaaagaggacaggggagacgggcgtagaggaaaccatcctg
gagggccacatcgggatcaccaaggagctgctggccttccagacatcagagaagaagtac
tacatcggctgtgagaagggaggggccaacctcatcaaggagttgatagatgacttcatt
ttcccagcatcgaatgtgtacctgcagtacatgaaaagtggggagttccccacggagcaa
gccatccctgtctgtagcagccccgcctctatcaacgcaggcttcgagctgctggtggcg
ctggcggtgggctgtgtccggaatctaaagcagatggtcgacacgctcactgatatgtac
tatctaggttgtgaggctctgacagagtgggagtatctccccccggtgggaccgaggccc
actaaaggctttgtgggactgaagaatgccggagccacctgctacatgaactcggtcatc
cagcagctctacatgatcccgcccatacgcaacggcattctggccatcgagggcaccggc
accgatgtggacgatgacatgtccggtgatgagaagcaggaaaacgagagtaatgtggac
ccgcgagatgaggtgttcaactaccaccaccagtttgacgacaagccatcgctcagtaaa
tcggaggacaggaaggagtacaacatcggggtgctgcgccacctgcaggtcatctttggc
cacctggcctcctccagactgcagtactacataccgagaggcttctggaaacagttcagg
ttatggggcgagcctgtgaacctgcgagagcagcacgatgccctggagttcttcaactct
ctagtggacagtctggacgaggctctgaaagccctgggtcacccagccatgctcagtaag
gtgctgggtggatcctttgctgaccagaagatctgccaggggtgcccacataggtatgag
tgtgaggagtcgttcaccactctgaatgtagacatcaggaaccaccagaacctgttggac
tcaatggagcagtacgtcaaaggagacctgctggagggtgctaacgcataccactgtgag
aagtgcaacaagaaggtggacacagtgaagcggctgctgatcaagaagcttcccccagtg
ctggccatccagctgaagaggtttgactacgactgggagagggagtgtgccatcaagttc
aacgactactttgagttccccagggagctggacatggagccctacacagtagctggggtg
gccaagctggagggggacgacgtcaacccagagaaccaggtgatccagcagaacgagccc
tctgaaccagagcccccaggcagctccaagtaccgcctggttggggtgctggtccactca
ggccaggccagcggcggacactactactcctacatcacacagaggaacgtgggtggggca
gacggcgagcggaaccgctggtacaagtttgacgacggcgacgtgacggagtgcaagatg
gacgacgaggaggagatgaagaaccagtgcttcggaggggagtacatgggcgaggtgttt
gaccacatgatgaagaggatgtcgtaccggcgccagaagcgctggtggaacgcatacatc
ctcttctacgagcggatggactcactggacaaggacagcgagctggtcaagtacattcag
gagctgaccatctcgtcctcgtccaacaacaagccgccgcaccaggtcaagatgcccggt
gtaatcgagtgcagtgtgcgcaagcagaatgtgcagttcatgcacaaccgtatgcagtac
agcctggagtatttccagtttgttaagaaactcctgacctgtaacagtgtctatttaaac
cctccgccaggacaagaccatctactgcctgaggcggaggagatggctatgattagtgtt
cagctggctgctaagttcctattcagcactgggttccacaccaagaaagtagtgaggggg
cccgccagtgactggtatgatgcactttgcgtcctgctgagacacagtaagaatgtacgc
tactggtttgcacacaacttcctgtttgcctacaccaaccgcttctccgagtacctgctg
gagtgccccagtgccgaggtccggggcgcgtttgccaaactcatcgtcttcattgcacac
ttctccctgcaagacggaccctgcccctcccccactgcctctcctgtcggagcctccacc
caaccacaggcatgtgataacctgagtctcagtgaccacctgttgaggactgtattgaac
ctgctcaggagagaggtgtcagagcacggccgacacctgcagcagtacttcaacctcttc
gttatgtatgccaacctggggctggcagagaagacccagttgttgaagctgagtgtccca
gctaccttcatgctggtggctctagacgagggtcctggcccacccataaagtaccagtat
gctgaactaggcaaactgtacaccgtagtctcccaactggtgcgctgctgtgacgtggcc
gcgcgcatgcagtcctctatcaatggtaacccccctctccctaacccgtacggtgatgcc
aaccagaccaccccggtgatgcccgtgcagcagctggtgggagagatcctgttcgtaagg
accagctatgtgaaaaagatcattgaggactgcagcaactcagaggagacggtcaagctg
ctgcgcttcagttgctgggaaaacccccagttctcctccactgtactatcagagctgctc
tggcaggtggcgtactcgtacacctacgagctgaggccttacctggacctgctgcttcag
atcctgctcattgaggactcctggcagactcacaggatccacaacgtgctgaagggtata
ccagatgacagggatggcctatttgacaccatccagcgctccaagaaccactaccagaaa
cgggcctaccagtgtatcaagtgcatggtagccctcttcagcaactgctctgtggcctac
cagatactacagagtaacggggacctgaagcgtaagtggacgtgggctgtggagtggctc
ggtgacgagctggagaggaggccctacacagggaaccctcagtacacctacaacaactgg
tctcccccagtccagagcaacgagacctccaacggatacttcctggagcgctcgcactcc
gcacgcatgaccctggccaaggcctgtgaactctgccctgaggagtgtcacttaacgaag
cacggtgaggcggtgtctgaagaagatgctgccatgcggaaatcgtcctcgccacagcag
cttttgccaggggaaggaacaggacagcagcacactgagcccgatgaccaggaagcccca
gaagatcaggacacctcccctccagatgacatctccctctaccctcatttgtctccggga
actacgacacagtttcagcagcagaacaaccacccccatgggcagccgtacacaggccca
gctgcccagcacatgaacaacccccagcgccctgtcccttcctctgccccaggccctgcg
cccggcacaggcccacaagcacaagacaactgggagagcactgaggaggtcccctccacc
acctccttggcccctgctccgcctaaggagtaa
DBGET
integrated database retrieval system
