Oncorhynchus masou masou (cherry salmon): 135547352
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Entry
135547352 CDS
T10723
Name
(RefSeq) transcription factor Sox-1a-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135547352
Transcription factors [BR:
omm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
135547352
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
135547352
NCBI-ProteinID:
XP_064832370
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All DBs
Position
10:22822112..22846585
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AA seq
298 aa
AA seq
DB search
MYSMMMETDLQSPGPQTNTHLGQTGPNSGSKANQDRVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLSGAGGGGMGLGVGMGSSGVGQRLESTGGHGGSASSGYAHMNGWANGAYSGQM
AAAAAAAAMMQEAQLAYTQHPGSGHHHHSHHHHHPHNPQPMHRYDMSALQYSPISNSEGY
MSASPSGYGGITYTQHQSSGVSSSAAMGTLGSLVKSEPSGVQYDDCHGGLSMDHRGDL
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggagacggacctccagtcccctggaccccaaacgaacacacat
ttggggcaaacggggccgaacagtgggtccaaagcgaatcaggaccgggtgaagcgtccg
atgaacgcgttcatggtgtggtcccgcgggcagcggagaaagatggcccaggaaaacccc
aagatgcacaactctgagatcagcaagcggctgggtgccgagtggaaggtcatgtccgag
gcggagaagagacccttcatcgacgaagcgaagcggttacgagcaatgcacatgaaggaa
cacccggattacaagtacagaccgagacggaagaccaagacgctgctgaaaaaggacaag
tactctctggccggtggcctgctctctggggccggcggcggtggaatgggtctgggtgtc
gggatgggttcatccggcgtcggccagaggttagagagcaccgggggccacgggggctcc
gccagctcaggctacgctcacatgaatggctgggcgaacggtgcgtactcggggcagatg
gctgcagctgctgcggcggcggcgatgatgcaagaggcgcagcttgcttacacccagcac
ccgggcagcgggcatcaccaccactcacaccaccaccaccacccgcacaaccctcagccc
atgcaccgctacgacatgtcggcactccagtacagccccatctcgaactctgagggctac
atgagcgcatctccgtccggctatggcgggatcacctacacgcagcaccagagctctggc
gtctcctcctcggctgccatgggcacgttagggtcgctggtgaagtcagagccgagcggt
gtccagtatgatgactgccatggtggactgtccatggatcaccgtggagacctgtga
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