Oncorhynchus masou masou (cherry salmon): 135547376
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Entry
135547376 CDS
T10723
Name
(RefSeq) collagen alpha-2(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04510
Focal adhesion
omm04512
ECM-receptor interaction
omm04820
Cytoskeleton in muscle cells
Brite
Exosome [BR:
omm04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
135547376
Glycosaminoglycan binding proteins [BR:
omm00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
135547376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135547376
NCBI-ProteinID:
XP_064832425
LinkDB
All DBs
Position
10:complement(25020132..25134119)
Genome browser
AA seq
1677 aa
AA seq
DB search
MSGTMQTRHRIELKSLKFLFLCLSVAILASGVDAGGKKHNGPCGGRDCSGGCKCFPEKGA
RGQPGPLGPQGPHGPPGGLGDPGVQGVQGEKGDRGRGGFIGPKGSVGMTGVPGFSGSDGI
PGHPGQAGTRGKPGADGCNGTHGDSGLSGKPGYDGQPGYNGQAGRKGQKGDTLELSVYME
WFRGDSGQPGYPGFVGPQGYPGRSGYRGLPGPQGPLGFPGLPGPKGTMTKVLKGVKGEAG
EAGQQGPPGNSTHPHTSPLTGPYGRKGEKGLKGETGVEADNKGETGIMGMPGQRGVPGRD
GEQGLRGDLGEPGFRGKDGQKGAIGEPGELIYYEGPSGGPNRVGPPGQLGPQGEMGLQGE
KGLPGRAGPPARKSDSQIQVEYLWGPFGEPGIKGETGPPGEPGIPALSPGPPGIGGISGL
RGPPGPPGSWADFYKGFAGSRGRPGSAGRKGLKGDHGLCECNIVHSPPGLPGPAGSQGDP
GMSGEFGQQGEPGEPGPRGVIGLPGFPGATGQPGPKGRKGDFIWAKEKGYAGDPGDPGAT
GDPGLQGFPGPSGINGFPGNRGLSGDAPEGLTGEKGYPGRSGLPGLFGQMGEPGRVLGAT
KGVRGLQGDDGEPGYAGVEGRAGDPGVSGCSLRGDGQLNDKGDCDAVPGPPGMPGPPGPQ
GLVGIPGIPGQNGFTGPLGDDGAKGEIGEQGIRGSPGQPGFTGPRGDLGQPGAKGTPGDQ
GLPGQQGRDGESGEKGPHGEIWGASTGQTGEVGLPGEQGPKGFSGEPGNEGYPGMGGMPG
MIGFKGDVGPSGLQGEQGRPGAAGKYGWKGVPGQAGVHGPTGSIGQPGLSGGRGDQGDPG
APGPIGLKGTPGEFGGPGAEGNTGHLGDPGEPGPTGHSGLPGFKGIKGSRGMSGFGGMPG
ESGLKGFSGQKGEDGIPGGFGQKGIMGDYGSKGERGLSGLPGEKPLIPRQIINDMKGTKG
EDGTPGQIGFTGPRGPKGFPGVPGMEGYHGVPGDPSDEKGFPGNPGAQGLPGPKGMPGPT
GSNGISGFPGMSGHRGEKGTPGAYGSSGDPGVKGVKGEEGPIIDMPGSTGLRGEDGFPGV
PGQKGYIGNPGDRGGGGFHGIDGMKGGLGEPGIGGPLGSDGQGGFQGNQGTKGWPGIPGE
SGTNGRPGFPGQRGFPGLKGILGLDGLKGEKGIPGLPGQDNLGTPGVPGAKGTRGETGIP
NSEVGTPGSLGLKGVQGQPGDQGQMGPPGFQGPQGPQGTSDKPGPSGDPGFPGPKGLPGF
PGPRGYPGEPSPYGEKGLAGHYGFPGFSGLKGKQGDQGPSGYKGQSGVSGKKGVKGEQGM
MGIPGRFGFQGDRGPSGPKGNTGLIGYPGAQGNQGPAPVPPRMPGERGAPGPQGIRGPEG
VRGETGPKGPPGAPGYLGPQGQKGMPGVGGRPGTPGYRGNDGGRGHLGLQGMEGHRGNPG
TTGLPGMPGRSVSVGYLLVKHSQSEQTPMCPVGMSKLWDGYSLLYFEGQEKAHNQDLGLA
GSCLPRFNTMPFLYCNPGDVCYYASRNDKSYWLSTTAPLPMMPVEEEEIKPYISRCSVCE
APSVAIAVHSQDITIPQCPVGWRSLWIGYSFLMHTAAGDEGGGQSLSSPGSCLEDFRTTP
FIECNGAKGTCHYFANKHSFWLTSIEQSFQAEPASETLKAGQFLSRISRCQVCMKNL
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggacaatgcagacaagacaccggattgaactgaagagcctgaagtttctgttt
ctatgtctttccgtggccatcctagcatcaggagttgacgcaggtggtaagaagcacaat
gggccatgtggaggaagagactgcagcggaggatgcaaatgtttccctgagaagggcgcc
aggggccaacctggtcctcttggcccgcagggaccccatgggcctccagggggcctaggg
gatccaggagtccaaggagtccaaggagagaagggcgaccggggcagaggaggcttcatc
ggccccaagggttctgtggggatgactggtgttcctgggttttctggatctgacggtatt
cctggccatccaggacaggcagggactcgtgggaaacctggagcagacgggtgtaacgga
acacatggagattcagggttgtcagggaaaccaggctacgatggccagcccgggtataat
ggtcaggcaggcagaaagggacagaagggggacactctggagcttagtgtgtacatggag
tggttcaggggagattcaggacagcccggatatcctggatttgttggtcctcagggttac
ccaggtcggtcgggctacagaggactcccaggaccacagggcccattagggttccctggc
cttcctggaccaaagggcaccatgaccaaagtgttgaagggggtcaaaggagaagcgggg
gaggctggacagcaaggtcccccagggaactctacccatcctcataccagcccacttacc
ggaccctacggcagaaagggtgaaaaagggttgaaaggtgaaactggagttgaggctgac
aacaaaggagagactgggattatggggatgcctgggcaaaggggtgtccctgggcgggat
ggagagcaaggactaaggggggaccttggagaaccaggatttaggggcaaagatggccaa
aagggtgccatcggagaacctggggagttgatatattatgaaggtccctcaggagggcct
aacagagttggtccccctggacagctgggaccccagggagagatgggtttgcagggagag
aaaggtctgccaggccgggctggacctcctgctaggaagagcgatagtcaaatacaagtg
gagtacctgtggggtccgttcggggaaccggggataaagggagagacgggcccacctgga
gagccaggtatccctgctctcagccccggacccccaggtatcggcggaatatctgggttg
aggggcccacctggaccaccaggatcatgggcagacttctacaagggatttgctgggtcg
agagggcggccaggctctgcagggagaaaaggactgaaaggtgatcacgggttatgtgag
tgcaacattgtccactctcctccgggcctgcctggccctgctggtagccaaggcgaccct
ggaatgagtggcgagtttggtcagcagggcgagccaggcgagccaggaccccgaggtgtc
atcggactgcctgggttccctggtgccacaggacaaccgggtccaaagggcaggaagggc
gacttcatttgggccaaagagaaaggatatgccggggacccaggagacccgggtgcgact
ggtgacccaggattgcagggcttccctgggccaagtgggatcaatggattccctgggaac
cgtggtctttcaggggacgcacccgagggactcactggagaaaagggttatcctggccgg
tcgggtctccctgggttgtttggacagatgggagaaccgggacgggttctaggtgccact
aaaggggtcagagggttacaaggcgatgatggggagccgggttacgctggtgtcgaaggt
cgagctggagatccaggagtgtctggctgtagtttgagaggagatggacaactgaatgac
aaaggcgattgtgatgccgtacccggaccacccggtatgccaggaccaccaggaccccaa
gggttagtgggtatcccaggcatcccaggtcaaaatggattcacaggtccacttggagat
gacggggccaaaggagagataggagagcaaggcatacgagggtctcccggacagccaggt
ttcactggcccccgtggagacttgggtcagcccggcgccaagggtacacctggagatcaa
ggtctgccaggccaacagggtcgggacggggagtccggggaaaagggaccacacggggag
atctggggagcgtcgaccggacaaactggagaagtgggtcttcctggagagcagggacct
aaaggttttagcggagagcctggaaacgagggctacccagggatgggtggcatgcctggg
atgattgggttcaagggcgacgtgggtccttcaggtctacagggggagcaaggaagaccg
ggagctgctgggaagtacggctggaaaggtgtacccggacaggcgggagtccatggacca
acaggaagcatcggacaaccaggtttgagcggaggcaggggtgatcagggcgaccctggc
gccccggggccaataggactgaaggggacaccaggggagtttggaggtccgggtgctgag
ggaaacaccggacacctgggtgaccctggagagccaggacctacaggacactctggcctg
ccagggttcaaaggtatcaaaggttctcgtggcatgtccgggtttggaggtatgcccggt
gagtcaggcctgaagggcttctctggacagaagggagaggatggcatacctggcggattt
ggacagaaaggaatcatgggcgactatggttcaaagggtgaacgtggtctgagtggcctg
ccaggcgagaaacccctcatccctcgtcagatcatcaatgacatgaaggggaccaaggga
gaagatggaaccccaggacaaatcggatttactggacccagaggtcctaaaggttttccc
ggagttccgggtatggagggctaccatggcgttcccggagaccccagcgatgagaagggt
ttcccaggcaacccaggggcgcagggacttccagggccaaaaggaatgccaggtccgact
ggatcaaacggaatcagcggctttcctgggatgtctggtcacaggggggagaaaggtacc
ccgggtgcctacggatcttcaggagatccaggagtgaagggtgtcaaaggtgaggagggt
cccataatcgacatgcctggttccacaggactgaggggggaggatggtttcccaggggtt
ccaggtcagaagggctacattgggaatccgggagacaggggcggtggtggtttccatggt
attgatggcatgaaaggggggctgggagagccaggcataggaggacctctaggatctgat
ggtcaaggagggtttcaaggcaaccagggtacgaagggatggcctgggatccccggagaa
tcaggcacaaatggacggccaggcttcccaggacagagaggttttcctggactgaagggt
atattgggactggatggactgaagggtgagaagggcatccctggacttccaggtcaggat
aacttgggaaccccaggtgttcctggtgctaagggaacgaggggtgagacaggtataccc
aactcagaggtcgggaccccaggatcgctgggtttgaagggcgttcaaggacaaccaggt
gaccagggccagatgggacccccagggtttcagggcccccaaggaccacagggcacctca
gacaaacctggaccatcaggagaccctggcttccctggacccaaagggctgccaggtttc
cctgggccccgtggatatcctggtgagccctctccatacggagagaagggtttagctggc
cactatggcttccctggattctctggtctgaaaggaaagcagggggatcagggaccatca
ggctacaaaggacagagtggagtgtctgggaagaaaggtgtgaagggagagcaagggatg
atgggaattcctggtaggtttggtttccaaggcgaccgaggtccttctggcccaaaagga
aatactggactcataggttacccgggagcccaaggtaaccagggcccagccccagtcccc
cccaggatgccaggagaaaggggtgctccagggcctcagggcatccgaggaccagagggg
gtacgaggggagactggcccgaaaggaccccctggagctccaggctacctgggcccccag
gggcagaaggggatgccaggggtgggtggcagaccgggtacccctgggtaccgtggaaat
gacggagggaggggccaccttggtcttcagggcatggaaggacaccgtggtaacccaggt
actacagggttgcctggcatgcctggacgcagtgtgagtgtgggatatctgttggtgaag
cacagccaatcagagcagacccccatgtgccccgtgggcatgtccaagctgtgggatggc
tacagtctactgtacttcgagggccaggagaaggcccacaaccaggacctaggtctggca
ggctcctgcctccctcgtttcaacaccatgcccttcctgtactgcaaccccggagacgtc
tgctactatgccagccgcaatgacaagtcctattggctgtccaccaccgcaccccttccc
atgatgcccgtggaagaggaagagatcaaaccctacatcagccgctgctctgtgtgcgag
gcgccgtccgtcgccatcgccgtgcacagccaggacatcaccatcccacaatgccctgtg
ggctggcgcagcctgtggattggctactccttccttatgcacacagcagcaggtgacgag
ggcggtggtcagtctctgtcgtcccctggttcctgtctggaggacttccgcaccactccc
ttcatcgagtgtaacggggccaagggcacctgccattacttcgccaacaaacacagcttc
tggctcacctccatcgaacagtccttccaggcagagcctgcctccgagaccctgaaagca
ggccagttcctctcacgcatcagccgctgtcaggtctgcatgaagaacctgtga
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