Oncorhynchus masou masou (cherry salmon): 135547454
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Entry
135547454 CDS
T10723
Name
(RefSeq) vacuolar protein sorting-associated protein 35-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04144
Endocytosis
Brite
Membrane trafficking [BR:
omm04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
135547454
BRITE hierarchy
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135547454
NCBI-ProteinID:
XP_064832557
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Position
1:complement(60999150..61016429)
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AA seq
798 aa
AA seq
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MPTTQQSPQDEQEKLLDEAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVR
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQLEGEDAMTGDIND
SIDFVLLNFAEMNKLWVRMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVEKY
KQIVLSGVLEQVVNCRDSLAQEYLMECIIQVFPDEFHLQTLNLFLRSCADLHQHVNVKNI
IIALIDRLALFAHREDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLA
MKCYPDRVDYVDKVLESTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLQL
KHFPPLFEYFDYESRKSMSCYVLSNTLDYNTTILSQEQVDAILSLVSTLIQDQPDQPAED
PDPEDFAEEQSLVGRFIHLLLSDDPDQQYLILNTARKHFGAGGNQRIRYTLPPLVFAAYQ
LAFRYKENSSSDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFEN
HETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERTKCFSEENHEPLRTQCALAAS
KLLKKPDQCRAVSICAHLFWSGRNTEKNGEEILDGKRVMECLKKALKIANQCMDPSLQVQ
LFIEILNRYVCFYERENDAVTVQVLNQLIQKIREDLPNLEASEETEQINKHFHNTLEHLR
LQRESPESEGPAYEGLVL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccacacagcagtcaccccaggacgagcaggaaaagctacttgatgaagctgtg
caggctgtcaaggtccagtcatttcagatgaagcgttgcctggacaagaacaagctgatg
gatgcattgaaacatgcatctaacatgctgggcgaactcaggacatccatgttatcgcca
aagagctactacgaactctacatggccatctctgacgagctccactacctggaggtgtac
ctgacagatgagtttgccaaaggcaggaaggtggctgacctctatgagctggttcaatat
gcagggaacatcatccccagactttacctgctgatcactgtgggggtggtgtatgttcgc
tccttccctcagtcgcgcaaggacatcctgaaggacctggtggagatgtgtcgtggggtg
cagcacccgctgagaggcctgttcctcaggaactacctgctgcagtgcacccgcaacatc
ttgcctgacgacggggagcagttagagggggaggatgcgatgacgggagacattaacgac
tccattgactttgtgttgctgaattttgctgagatgaataagctgtgggtgcgcatgcag
caccagggccacagccgagacagggagaagagggagaaggagaggcaagagctgcgcatc
ctggtcgggaccaacctggttcgactcagccagctggagggggtcaacgtggaaaagtat
aaacagattgtgctgtccggtgtcctagaacaggtggtaaactgcagagattccctggct
caagaatatctcatggagtgcatcattcaggttttccctgatgagttccaccttcagaca
ctgaacctattccttcgttcctgtgccgacctgcatcagcacgtcaatgttaaaaacatc
atcatcgctctcattgacagactggctttgtttgctcaccgagaagatggacctggaatc
cctgctgaaatcaaactgtttgatattttctcccaacaagtagccacagttatacagtcc
cgccaggacatgccttcggaggatgtggtctcactacaggtgtccctcatcaacctggca
atgaagtgctaccctgaccgggtggactatgtggacaaggtgttggagagcacagtggag
atcttcaataagctcaacctggagcacattgcaaccagtagcgcagtctcgaaagagttg
acgaggctgctgaagatcccagtggacacctacaacaacattctgaccgttctgcaactc
aagcacttcccaccactcttcgagtactttgattatgagtcccgtaaaagcatgagctgt
tatgttctgagcaacactctggactacaacaccaccattctatcccaggagcaggtggat
gccatcctatccctggtgtcgacactgatccaggaccagccagaccagcccgctgaggac
ccagacccagaggactttgctgaggagcagagccttgtgggtcgcttcattcatctgctg
ctttccgatgaccccgaccaacagtatctgatcctgaatacagccaggaagcactttggt
gctggggggaaccagaggattcgctacactcttccaccgctggtgtttgctgcctatcag
ctggccttccgctacaaagagaactcttcatcagatgataaatgggagaagaagtgccag
aagatcttctcgtttgcccaccaaaccatcagtgctctgatcaaggctgagctggctgag
ctgcccctcagactctttctacagggggcgcttgccgcaggagagattggcttcgagaac
cacgagactgtggcctacgagtttatgtcacaggccttctccctgtatgaggatgagatc
agcgactccaaggctcaactagcagctatcacgctgatcatcggcacgtttgagagaaca
aaatgcttcagcgaggagaaccacgagcctctgaggacacagtgtgcgctcgctgcctcc
aaactgctcaagaagccagaccagtgtcgggccgtcagcatctgtgcacacctcttctgg
tccggacgcaacactgaaaagaatggagaggagattcttgacgggaagagggtgatggag
tgcttaaagaaggccctgaaaatcgccaaccagtgcatggacccgtcattgcaagtgcag
ctcttcattgagatcctgaacagatatgtctgtttctacgaaagagagaatgatgcggtg
acggtccaggttctgaaccagctgatccagaagatccgagaggacctgccaaacctggag
gccagcgaggagacggagcagatcaacaaacacttccacaacacactggagcacctgcgt
ttgcagagagagtcgccggagtccgaggggcctgcttatgagggcctggtgctgtag
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