KEGG   Oncorhynchus masou masou (cherry salmon): 135547461
Entry
135547461         CDS       T10723                                 
Symbol
wdr3
Name
(RefSeq) WD repeat-containing protein 3
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
omm  Oncorhynchus masou masou (cherry salmon)
Pathway
omm03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:omm00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    135547461 (wdr3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:omm03009]
    135547461 (wdr3)
Ribosome biogenesis [BR:omm03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    135547461 (wdr3)
SSDB
Motif
Pfam: Beta-prop_WDR3_2nd Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd WD40_Gbeta WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Utp12 NBCH_WD40 DSE1_N Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_WDR75_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_NOL10_N Beta-prop_WDR41 PEP5_VPS11_N Beta-prop_EIPR1 CFAP251_N Beta-prop_Aladin Beta-prop_DCAF4 ASA1 Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_HPS5 WDR54 Beta-prop_ACSF4 Beta-prop_WDR35_TULP_N RMC1_N Beta-prop_WDR75_2nd VPS11_N WD40_like Beta-prop_LRRK2 B-prop_COPA_B_2nd PAC11
Other DBs
NCBI-GeneID: 135547461
NCBI-ProteinID: XP_064832564
LinkDB
Position
10:28178466..28192854
AA seq 939 aa
MGLTKQYLRYAASAVFGVIGSQKANIAFVTMRGGERGRFVAVAACEHVFIWDVRKAEKVL
ILKGNKHEVTYLCPSPDGIYVAVGYEDGAVRIFSLLNGESNVSFNGHKSAVTVIRYDTLG
SRLVTGSRDTDVIVWDVINECGLYRLKGHKDAVTQALFLKDKNLLVTSSKDSFVKWWDLD
TQHCFKTMLGHRSEVWGMALLNQESRLITGSADSELRAWDINYLQEGREAGEPKEKKGKS
LLDDDDEEEEEVVDESPEERILSCKKAGSLLREARDRVVSMTTDAKAKVLACHGSDTVLE
VFSVLPEDEVERVMAKKLKRAKKKARDAQLAEDAPEPVVERKLANEIVRLTNIKASANIR
WVDCLMCAGGELKVAMLLQNNTVETYSLKTSDKNPTGIKTSRLTLGGHRTDARTLAFSSD
NIAVLSASGDTVKVWNRSTLQVIRTMACDYALCSLFVPGDRQIILGTKSGKIQIFDLASG
TLLETVDAHNGALWSLCLSPDQRGIVTGGADKTVKFWEFELIKDEDAAQKRLTVKHMRTL
QLDEDVLCVKYSPDQRLLAVSLLDCTVKVFYTDTLKFFLSLYGHKLPVLCLDISHDSALI
ATGSADRNVKIWGLDFGDCHRSMFAHDDSVMFLQFVPKTHLFFTAGKDKKIKQWDADKFE
HIQTLEGHHREVWCLAISPNGDHIVSSSHDKSLRLWERTREPIILEEEREMEREAEFEEG
MAKGDEPVVPGEIKDAEAAPAAKKTIETVKAAERVMEALELYRSESRKMEEHQIACQSAG
KQLPPPKANPILVAFGNVSPSRYVLDVIKKVRSSELEVSLLVLPFPYIPDLLSLFNCYVQ
DGLEVELVCRCLFFLLRIHFGQISSNQMLLTVIDDLRINTISKVREIRDVLGFNSAGLQF
LQREVESKEEIMFFADATGLLKEKRRKRKKRERAILTIA
NT seq 2820 nt   +upstreamnt  +downstreamnt
atgggattgaccaagcagtacctgcgctatgctgccagcgccgtgttcggagtaattggg
agccagaaggccaacatcgcctttgtaaccatgcgaggaggggagagaggacgctttgtg
gctgtggctgcctgtgagcatgtcttcatatgggacgtgcgtaaagcagagaaggttctt
attctcaaggggaacaagcacgaggtgacttacctctgcccctcccccgatggcatctat
gttgctgtgggttacgaggacggggctgtgcgcatcttcagcctattgaacggcgagagc
aacgtgtccttcaacgggcacaagtccgcagtcactgtgatccgctatgacactctcggt
tctcggctggtgaccggatccagggacacggatgtgattgtgtgggatgtgatcaacgag
tgtggtctgtaccgactgaaaggacacaaagacgctgtcacacaggccctgttcctcaaa
gacaagaaccttctggtcaccagctccaaggacagctttgtaaagtggtgggacctggac
actcagcactgctttaagaccatgctgggacatcgcagtgaggtctggggcatggcactg
ctgaaccaagagagtagattgataacaggctcagctgacagtgagctccgggcctgggac
atcaactacctacaggagggcagagaggctggtgaaccaaaggagaagaaaggaaaaagc
ctacttgatgatgatgatgaggaggaggaggaagttgtggacgagagccctgaggagagg
atcctgagttgtaagaaagctggctctttgctgagagaggccagggacagggtagtctcc
atgactaccgatgccaaggccaaggtcctggcgtgccatggctcagacacagtgctggag
gtgttcagtgtgctgccggaggacgaggtggagagggtgatggccaagaagctgaagaga
gccaagaagaaggccagggatgcgcagcttgcagaggacgccccagagcctgtggtggag
aggaaactggcaaatgagattgtgagactaaccaacatcaaggcctccgccaatatcaga
tgggtggactgcctgatgtgtgcgggtggggagttgaaggtagccatgctgctccagaac
aacaccgtggagacctacagcctcaagacgtctgacaagaatcccacgggcattaagacc
tcccggctcaccctgggaggccaccgcaccgatgcccgcacgctggccttcagctcagac
aacatcgctgtcctctctgcctctggggacaccgtcaaagtctggaacaggtctaccctg
caggtgattcgcaccatggcgtgtgactacgccctctgctccctgtttgtccctggagac
aggcagatcatcctagggaccaagagtggtaagattcagatctttgacctggcatcaggt
accctcttggagactgtcgacgcccataacggagctctgtggtccctctgtctgtctcct
gatcagagggggatagtgactggcggggctgacaagacggtgaagttctgggagtttgag
ctgattaaggatgaagacgctgcacagaagaggctgacggtgaaacacatgcgtacactg
cagctggatgaggatgtgttgtgtgtgaaatattctcctgaccagagactgttggctgtc
tccctgctggactgcaccgtcaaggtcttctacacagacacactcaagttcttcttatct
ctgtatggacacaagctgcctgtgctctgcctggacatctctcatgacagtgccttaata
gcaactggctctgcagacagaaacgtcaagatctggggtctggactttggggactgtcac
agatctatgtttgcccacgatgacagcgtcatgttccttcagtttgtccccaaaacccat
ctgttcttcacagcggggaaggacaagaagatcaaacagtgggacgcagacaagtttgag
cacatccagaccttagagggtcaccatcgggaggtttggtgtctggccatcagtcctaac
ggggaccacattgtgtcctcgtctcacgacaagtccctgaggctctgggagaggaccaga
gaacccatcatcctggaggaagagagggagatggagagagaggctgagtttgaggagggc
atggccaaaggggatgagcctgtggttccaggagagatcaaggatgcagaggcagcacca
gcggcgaagaaaaccatagagacagtcaaagctgctgagcgtgtcatggaggctctggag
ctgtacagatcagagagcaggaaaatggaggagcatcagatagcctgccagtcagccgga
aaacagttgcctccacctaaggccaatcctatccttgtggcctttggaaacgtttctccg
tctcgctacgtcttggacgtaataaagaaggtccggtccagtgagctggaggtgtctttg
ctggtcctgccgttcccctacattccagacctgctgtctctcttcaactgctatgtccag
gacggcctggaggtggagctagtgtgccgttgtctcttcttcctgctcagaatccacttt
ggccagatctccagtaaccagatgctgctgaccgtcatagacgatctgagaatcaacacc
atttctaaagtccgagagatcagggatgttctgggtttcaacagtgctggtctccagttc
ctccagagggaggtcgagagcaaagaggagatcatgtttttcgcggacgccaccggtctc
cttaaagagaagaggaggaagaggaagaagagagagagagctattctcactattgcctga

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