Oncorhynchus masou masou (cherry salmon): 135547489
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Entry
135547489 CDS
T10723
Name
(RefSeq) GRIP and coiled-coil domain-containing protein 2-like isoform X1
KO
K20282
GRIP and coiled-coil domain-containing protein 2
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
135547489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135547489
Membrane trafficking [BR:
omm04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
135547489
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rab_bind
GRIP
CCDC106
Motif
Other DBs
NCBI-GeneID:
135547489
NCBI-ProteinID:
XP_064832617
LinkDB
All DBs
Position
10:30037347..30061044
Genome browser
AA seq
1700 aa
AA seq
DB search
MEQDPVSESVASPPSGAAKSKLDTLSKDDLIKFAKKQMAAIQKIKSKCADLEKEVDTLKS
LPTGNSDDSVIQEMTERMSALLLEKAETQQSAVLLRKENEKVKQREQDAVRKLATLQGEL
NQAKEDHQKTMHVSQAKHKEEVKFFQRLLREKDESDREKESEREKEKHREREKEDTNDSV
EAVSHSLESQILSLQTELAAAVERSAQEAAVLQEDHQRAQTEAQQEVENLREELAQHSMQ
HEEELRALEEDFEMERERLLLLQEELSEQLALKDSFLQDVQEEEEEPSGRSSGIARMLEL
SGLSQIDASDGETETGQLRSALEDLQSQNTMLQDELTFLGNVKTQLEAELERMREEFQTE
KEELEFKIDELLMTREGATPDLNMTPYRDPLSPATPKCDLQEVPALIQLQQSGPQREPAY
SLPASSASPSSPFPDTVHQSLTLEEQQRLILEVQELRTQCETLARKNTQAVGECESLAKE
RCRAVDECEYLARERGQAVAECEHTRDILRGLETELGQRTGDFVRQYEAMKEQGASAIQE
LQERVRGLTEERESLVETLRVLNEDRESLLEKVQSLEKRLESFLEQTQAAEGLKEQLQTS
LEEKTELALEFKTSLEEKTVLASELKASLEEQTALTLELKASVEDLSRQNGDILSQLQMK
ESAVQELEETVNVVSTERDQTLSALQDREMEVVRLREVEGREGQRERVAELQARIEELEK
ERSLLKSSLGEVQGSPGEEVEELQARIEELEKERSLLKNSLGEVQGSPGEEVEELQARIE
ELEKERSLLKNSLGEVQGSPGEEVEELQARIEELEKERSLLKSSLGEVQGSPGEEVEELQ
ARIEELEKERSLLKCNLGELVGDTEALQRDLVEMKLANQKMRTENQELLAQVSNATETLA
DKEREQKVGGETERAEEEKQEEKRALQQQLTEKDKVISQLKSEMAVLQSTASTVSEENTA
IELTEKIALLEKESKEKDERMNKIKAVAVKARKELDTSRKEAVSLKEEVEVLKAEREKVT
SSMKDIIHGAEGYKNLQLDYDRQTEQLDKEREKVEGAEKQISELTKRLNTAVQQHEQLWS
EREDLMTGMETLRSTVRQMEGQTAELHRQTDTLNRDHQAERLLKEQKTKELSSLQKEVEE
LTAQLRRQKQQSQQTARELEQLRKEAQQSSLLDMEMADYERLVKELNTKLSEKDVCVEEL
KTQIHTHTQKEDTLNQEIEGLKSQLDQCEDKGAKMKQLLVKTKKDLADAKRQEASQMMTL
ASLKGELETHQQELENSKIQCCDLSGERHRLHEQLRTLTEQQQRTSSTLQHRLTSLQQEF
NTAQAELSFVTTEFDSYKVRVHNVLKQQKNKSSAQSDGHVTKQEREQMESMVDQYKAKLQ
DSQQSLAVSTAEFQQLQMEHDTLLERHNKILQETVTKEAELRERLLSLQAESMSLRTELA
QTVGQLTSQADAQRSGFREQIRHLQDEHRTTVETLQNQMTRLENQLFTLQSQTAPVQTSR
KPVVDRRTVDQGAMGGLGLSDLQSMAREEGEGMETTETESLSLPHTPLPSLEHLLTSPDP
KQEPFVWQVEPTKEELSQKLATATRSMEHMNMLLHETEATNAVLMEQVNLLKSEVRRLER
NHEREKSVANLEYLKNVLLQFIFLQSGSERRALLPVIHTMLQLSPEEKNKLAAIAMGEEE
VGGAKGSGWTSYLHSWSGIR
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggaccctgtttcagagtctgtggcctcaccaccttcaggtgcagcaaaatca
aagttggacacgttgtccaaggatgacctcatcaagtttgccaagaagcagatggctgcc
atccagaagatcaagtccaaatgtgcagatttggagaaggaagttgacaccctcaagtct
ctgccaacaggcaattcagacgactccgtcatacaggagatgactgagaggatgagtgcc
ttgctgctggagaaggctgagacccagcagagtgcagtgttgctacggaaggagaatgag
aaggtcaagcagcgggaacaggatgcagtaagaaaactggccaccctgcagggagagttg
aaccaggccaaggaagaccaccagaagaccatgcacgtatcccaggccaaacataaagaa
gaggtcaaattctttcagaggcttctgagagagaaagacgagagtgacagagagaaagag
agcgaaagagagaaagaaaagcatagggaaagagaaaaggaagatacaaacgacagtgta
gaagctgttagtcacagcctggagtcgcagatcttgagtctgcagacagagctggctgca
gcggtggagcgaagtgcccaggaggctgcagtgctgcaggaggaccaccagagggcgcag
acagaggcccagcaagaagtagagaacctacgagaagaattggcccagcatagcatgcaa
catgaagaggagctgagagctctggaggaggactttgagatggagagagagagactgctt
ctcctccaagaggagctcagtgagcagctcgctctcaaagacagtttcttgcaggatgtg
caggaggaagaggaggagcctagcggccgcagctcgggtatagccaggatgttggagctg
tctggtttaagtcagattgatgccagtgatggagagacggagactggacagctccgatcc
gccttggaggacctgcaatcccagaatacaatgctgcaagacgaactgaccttcttgggc
aatgtgaagactcaactggaggcggagcttgagaggatgagggaggagtttcagacagag
aaggaggagctagaatttaagatcgatgagttgctgatgacccgggagggtgcgacccct
gacctgaatatgaccccttaccgagaccctctgagcccggcaacccccaagtgtgacctt
caggaggttccagccctcattcagctccagcagagtgggccacagagagaaccagcgtac
agcctgcctgccagctctgctagcccctccagccctttccctgacacagtccaccagagt
ttgaccctggaagaacagcagagactgatcctagaggtccaggagctgaggacccagtgt
gagaccttagctagaaagaatacccaggcggtgggtgaatgtgagtctctagccaaagag
aggtgccgggcagtggatgaatgtgagtacctagccagagagagggggcaggcggtggct
gagtgcgaacacaccagagacatcctgagaggcctggagactgagctaggtcagaggact
ggggacttcgtcagacaatatgaagctatgaaggaacagggggcgtcagccatccaggag
ctacaggagagagtcagagggctaactgaggagagagagagtctggtagagacgttgaga
gtgctgaatgaagacagagaaagcctattggagaaggtccagagcctggagaagaggctg
gagagcttcctggagcagacacaggcagccgaggggctgaaggagcagctgcagacatct
ctggaggagaagacagaattagctctcgagtttaagacctctctggaggagaagactgtg
ttagcctctgagctaaaggcctctcttgaggagcagacagcgttaaccctcgagctaaag
gcttcagtggaggatctgagcaggcagaatggggatattctctctcagctacagatgaag
gagagtgctgttcaggagttagaggaaacagtcaatgtggtgagcacagagagggaccaa
acactgtcagcactgcaggacagagagatggaggtggtgaggctgagggaggtggagggg
agggaaggccaaagagaaagggtggctgagctacaggctcgtatagaggagctggagaag
gagaggagcctgctgaagagcagcctaggggaggtgcaggggagcccaggggaggaggtg
gaggagctgcaggctcgtatagaggagctggagaaggagaggagcctgctgaagaacagc
ctaggggaggtgcaggggagcccaggggaggaggtggaggagctgcaggctcgtatagag
gagctggagaaggagaggagcctgctgaagaacagcctaggggaggtgcaggggagccca
ggggaggaggtggaggagctgcaggctcgtatagaggagctggagaaggagaggagcctg
ctgaagagcagcctaggggaggtgcaggggagcccaggggaggaggtggaggagctgcag
gctcgtatagaggagctggagaaggagaggagcctgctgaagtgtaatctgggggagctg
gtgggagatactgaagctctacagagagacctggtagagatgaaacttgccaatcagaag
atgagaacagagaatcaggaattattggcccaggtcagcaacgctacagagacactggca
gacaaagagagggagcagaaggtgggaggagagacagaaagagcggaggaggaaaaacaa
gaggagaagagagcgctacaacagcagctaacagaaaaggacaaagtcatatcccagctg
aagagtgagatggctgtcctgcagtctacagcctccactgtctcagaggagaacacagcc
atagagttaactgagaaaatcgccctgctggagaaggaaagcaaagagaaggatgagagg
atgaataagatcaaggcagtggctgtgaaagccaggaaggagctggacaccagcaggaaa
gaggctgtgtctttgaaggaggaagtggaggtgttgaaggctgagcgagagaaagtgacc
agctcaatgaaagacatcattcatggagcagagggatacaagaacttacagttggactac
gacagacagacagagcagctggataaggagagagagaaggtggagggagctgagaaacag
atctccgagctgaccaaacgactcaacaccgccgtacaacagcatgagcagctgtggtcg
gagagagaggacctgatgactggaatggagacgctgaggagcacggtgagacagatggaa
ggacagacagcagagctgcacaggcagacagacaccctgaacagagaccatcaggctgag
agactactgaaggaacaaaagacaaaggagctgtcgtcgttgcagaaggaggtagaggag
ttgaccgctcagctccgcagacagaagcagcagtctcagcagactgcacgggagctggag
cagctacgcaaggaggcccagcagagctcgttgttggacatggagatggcagactatgaa
cgcctggtcaaagaactcaacaccaaactgtcagagaaggacgtgtgtgtggaggagctg
aaaacacagatacacacacacactcagaaagaagacacactcaaccaggagattgagggt
ctgaagtcccagctggaccagtgtgaggacaagggcgccaagatgaaacagctgctggtg
aaaaccaagaaagatctggcggatgccaagcggcaggaagcctctcagatgatgaccctg
gcctctctgaagggagaactggagacccaccaacaggagctagagaacagtaagatccag
tgctgtgacctgtctggggagcgccatcggctgcatgagcagctgaggactctgacggaa
caacagcagagaacaagcagcaccctgcaacaccgactgacctcactacagcaggagttc
aacactgcccaggctgagctgtcatttgtcactactgagtttgacagctataaggtcaga
gttcacaatgtcctcaaacagcagaagaacaagagttcggcccagagtgacggacacgtc
accaaacaggagagagagcagatggagtccatggtggaccagtataaagccaagctgcag
gacagtcagcagagtctggcggtgagcactgcagagttccaacagctccagatggaacac
gacacactgctggaacgacacaacaagatactgcaggagaccgtaactaaagaggccgag
ctcagagagcgactcctgtctctccaggcagagagtatgtcgctgcggacagagcttgcc
cagacggtgggtcaacttacctcccaggccgacgcccaacgctcagggttccgggagcag
atccgccaccttcaggacgaacacagaactacagtagagaccctgcagaaccagatgacc
cggctggagaaccaactattcacattgcagagccagaccgctccagtccagaccagtcgt
aagccagtggtggaccgccggactgtggaccagggggcgatgggggggttgggcctcagt
gacctccagtccatggctagagaggagggggagggcatggagaccactgagacagagtcc
ctgtccctcccacacacacccctaccctcactggagcatctactcacctccccagacccc
aaacaggagccgtttgtgtggcaggtggagccgactaaagaggagttaagtcagaagttg
gccacagctacacgcagtatggaacacatgaacatgctactgcatgagacagaggcgacc
aacgctgttctgatggaacaggtcaatctgttgaagtctgaggtgcgtcgtctggagcgt
aaccatgagagggagaagagtgtagccaacctggagtatctgaagaatgtcctcctgcag
ttcatcttcctgcagtcaggcagcgagagacgggctctactccctgtcatacacaccatg
ttacaactcagccctgaggagaagaataaactggctgctatcgcaatgggtgaggaggag
gtgggaggagctaaaggctcaggatggacctcctaccttcacagctggtctggcatcaga
taa
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integrated database retrieval system
