Oncorhynchus masou masou (cherry salmon): 135547599
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Entry
135547599 CDS
T10723
Name
(RefSeq) integrin beta-5-like
KO
K06588
integrin beta 5
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04145
Phagosome
omm04148
Efferocytosis
omm04510
Focal adhesion
omm04512
ECM-receptor interaction
omm04810
Regulation of actin cytoskeleton
omm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135547599
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
135547599
04148 Efferocytosis
135547599
09144 Cellular community - eukaryotes
04510 Focal adhesion
135547599
09142 Cell motility
04820 Cytoskeleton in muscle cells
135547599
04810 Regulation of actin cytoskeleton
135547599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135547599
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omm04515
]
135547599
Membrane trafficking [BR:
omm04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
135547599
Cell adhesion molecules [BR:
omm04515
]
Integrins
Integrin beta subunits
135547599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
PSI_integrin
EGF_integrin
I-EGF_1
EGF_2
vWA_SIBA-E
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
135547599
NCBI-ProteinID:
XP_064832816
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Position
10:complement(38867323..38952114)
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AA seq
803 aa
AA seq
DB search
MWNPWQLYRTALGCMILEIFIHNVAQGLNVCMSGSAMSCEECLIIHPSCAWCAQETFGSA
RTLMSRCDLRQNLQKRGCEAHHMESPSSSTTVVKSESLSSKGSGPTQYDVIQIMPQKISL
SLRPGDQTSFKVQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLADEMRKLTSNFR
LGFGSFVDKNMSPFSYTARKYQDNPCNGYKLFPSCVPSFGFRHLLSLTDKVDRFNEEVQK
QMVSRNRDAPEGGFDAILQAAVCKERIGWRKEAFHLLVFATDDVPHLALDGKLGGLVQPH
DGECHMNEKNEYSGSTNMDYPSLALLGEKLAANNIYLIFAVTKRLYVIYKNFTALIPGTT
VEILDQDSKNIIQLIVNAYNNIRSKVELTVWDQPEDLSLSFTATCQDGQPLPGLRKCADL
KIGDTVSFNVSIDARGCPAPGTQQSFTIKPVGFKDRLEVSVDYRCACGCTDQTQANSTHC
SSIGQYTCGICRCDPGYLGARCECQEGEAGSMYLSACRQAEGMQICGGRGECSCNQCLCY
ESEFGKIYGTFCECDDFSCARHKGILCSGHGECHCGECKCHAGYIGDNCNCSTDTSSCVS
DDGQICSGRGSCACGRCQCTEPGAFGDTCEKCPTCPDACGTKRECIECRLFSSGRLSDNQ
TCQRLCKDEIITVETLKTDDPNAVLCLYKTENECVMKFTYSEHANGMSVLTALKEPECGA
SPDAMTVLLAVVGSILLVGIVLLAIWKLVITVHDRREFARFQSARSRARYEMASNPLYKQ
PISNDYVETDFSMYSKSYNGAAH
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacccgtggcagttgtaccgtacagctcttggctgcatgattctggaaatattt
attcacaatgttgcacaaggtctgaatgtgtgtatgagtggcagcgctatgtcttgtgaa
gaatgcctcatcatccatccaagctgtgcctggtgtgcgcaagagacgtttggcagtgcg
aggaccctgatgtcgcggtgtgacctgcgtcagaacctgcagaagaggggctgtgaagcc
catcatatggagagtcccagtagcagcaccacggtagtgaagagcgaatccctcagctcc
aaaggctccgggcctacccagtatgatgtcatccagatcatgccccagaagatctccctc
agtctccgaccaggtgaccagacatcattcaaagtgcaggtgcgtcaagtggaggactac
ccagtggacctgtactacctgatggacctgtctctgtccatgaaggatgacctggacacc
atcaggaacctgggcaccaaactggccgatgagatgaggaaactcaccagcaacttcaga
ctgggcttcggatcctttgttgacaagaacatgtcccccttctcctacacggcccgcaag
tatcaggacaacccctgcaatggatacaaactgttccccagctgtgtcccctccttcggg
ttccgccacctcctctccttgactgacaaagtggatcgcttcaacgaggaagtacagaaa
cagatggtgtctcgcaacagggacgctccggagggaggcttcgatgccatcctgcaggct
gccgtctgtaaggagaggataggctggaggaaggaggccttccacctgctggtgtttgcc
acagacgatgtgcctcacctggccttggacggtaagctgggagggctggtccagccccat
gatggggagtgccacatgaatgagaagaatgagtacagtggctccaccaacatggactac
ccctctctggctctactaggagagaagctggctgcaaacaacatctatctcatcttcgcg
gtgacaaaaaggctgtatgtcatttacaagaatttcacagcactgatacctggaaccaca
gtggagattctggatcaggactccaagaacatcatacaactcatcgttaacgcctacaat
aacatccggtccaaggtggagctgaccgtgtgggatcaacctgaagacctcagtctgtcc
ttcactgccacctgtcaggacggacagcctctcccaggcctcaggaagtgtgccgacctc
aagattggagacacggtgtccttcaacgtgagtatagacgccagaggctgccccgcccca
ggtacccagcagagtttcaccatcaagcctgtgggcttcaaggatcgtctggaggtgtct
gtggactaccgctgtgcctgtggctgcaccgaccagacccaggctaacagtacccactgc
agctccattggacagtacacctgtggtatctgccgctgtgacccgggctacctgggtgcc
cgctgtgagtgccaggagggtgaggctggcagcatgtacctgagtgcctgcaggcaggct
gaggggatgcagatatgtggtgggagaggggagtgcagctgtaaccagtgcctctgctat
gagtcagagttcgggaagatctacgggaccttctgcgagtgtgacgacttctcctgcgct
cggcacaagggcatcctctgctcgggtcacggagagtgccactgtggagagtgtaagtgc
catgcgggctatatcggggacaactgtaactgttccactgacacctcatcctgtgtgtct
gatgacgggcagatctgcagcgggcggggcagctgtgcgtgtgggcgctgccagtgcact
gaaccaggggccttcggggacacctgcgaaaaatgccccacctgccctgatgcctgtggc
accaagagggaatgcatcgaatgccggcttttcagctctggaagactgtccgacaaccag
acctgccagcggctatgcaaggatgagatcatcactgtggaaacgcttaaaacagacgac
cccaacgctgtcctctgcctgtacaagacggagaacgaatgtgtgatgaagttcacatac
tctgaacacgccaacggaatgtcagtcctcacagctctcaaagagccagagtgtggtgct
tcaccggacgccatgacggtcctcctggcggtggtgggcagtatcctactggtgggcatc
gtgctgctcgccatctggaagctggtcatcaccgtgcacgaccgcagagagttcgcccgc
ttccaaagcgcacgctcccgcgcacgatatgagatggcctccaaccccctgtacaagcag
cccatctccaacgactatgtagaaaccgatttcagtatgtacagcaagtcttacaacgga
gcagcccactga
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integrated database retrieval system
