Oncorhynchus masou masou (cherry salmon): 135547819
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Entry
135547819 CDS
T10723
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup155-like
KO
K14312
nuclear pore complex protein Nup155
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135547819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135547819
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135547819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
SAP130_C
Motif
Other DBs
NCBI-GeneID:
135547819
NCBI-ProteinID:
XP_064833126
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Position
11:20865094..20876786
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AA seq
956 aa
AA seq
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MFDGLQEGKESLQEMAIPHSADVDSSIKRILLDYKYCSAYCLYLISDVQCRWALCAIEEE
KAPNISTPLNKDQVPLTDTPVVVQQHNVPPQKFVLISAKGSHIFHKLRPVDQLRHLLVCG
TGGEREEVERFFKLHREEQACATALMRFPSAHSAPSSIGALFGSPVPGSHMSVGSSPIPN
PSFLTXPAPGMMPQCVSTPHVPAMPSAPIAGLSSGPEVVFLGKHNGISAYFTRILGNIWD
GSLAIEKIVMKGNQAVSILESTASSSDLESVLLEIYGLKDFLDKNSQFSPSSLGTASFSS
PANLQQRLQGFMRPDGGASSQQVQQELQRKYHTEAQVYEKMSLQGIQQLVHRSCQTLALW
KLLCDHQFSLIVSELPKEFQDQMKGVSFKDVVIWGRVLTEALITGLINVHIKDFASVDAI
STHLRDICPLLYSSDDSICSNANELQQGSRQIHNRTDKERTLRESLQLYQLISHHTDLPL
VCSQYRQVRFYEGVLELCLTAADKKDPQRLRPRIYKNGEPEEDQTGALAFQERLSCYKCI
TETIQDLVNQSKAAPQSPSVPKQPGPPVMTSDPNMLSNEDATAHFEQIICLAQRSQDELF
HIALYNWLIQADLTDKLLEVNSPYLEDHLMHMIKQEQSKVRNMDLLWRNYEKSCSFGASA
HVLARLADMLSTEISLKQRLEYISRAILSAKSSSCISAQGAEGEFLHQLEEKMEVVRIQV
QIEDTLSRQYPQHPSVQGAVSQLDSELMDITKLYGEFADHFRLPECKLAIIHCAGHSDPI
LVHSLWQEVMEKELGDSLAKSPADRMSALNLKLVSLGKIYAGTPRYFPLEFLVKFLEQVV
CRLNWNVGFVTFTMQEIGLQLTCLLAVYDQLFKTRDPCWQRLKQPLHLVECIHVLLSGYV
EDPSKVPTSDRRRFTNVCLDNICGYLVELQSLSPNAALQLTIGNFKALQAKLEKVH
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacggcctccaggaggggaaggagtctctccaagaaatggccataccacactct
gccgacgtggacagctccatcaagaggatcctcctggattataaatattgtagcgcatat
tgtctgtatttaatttcagatgtccaatgtagatgggcgctatgtgccatcgaggaggag
aaagcacctaacatctctacccccctgaataaggaccaggttcccctcactgacactcct
gtcgtggtgcagcaacacaatgtccctccacagaagtttgtccttatctctgccaaggga
agtcacatattccacaagttgcggccggtggaccagctgcgccacctactggtgtgcggt
actggtggagagagggaagaagtcgaacgcttcttcaaactgcacagggaggagcaggcg
tgtgccactgctctgatgagattcccctcggctcattctgctcctagcagcattggcgcg
ctgtttggctctcctgtaccaggatcccatatgtctgttggtagcagccccattcctaac
cctagtttccttactnnaccggctccaggtatgatgccccagtgtgtgtctacgccccat
gtaccagccatgccctccgcccccatcgctggcttgtcctctgggccagaggtggtcttc
ttagggaagcacaacggcatcagtgcctacttcacacgtatactgggtaatatctgggac
gggagtcttgctattgagaagatcgtcatgaaaggaaatcaggctgtcagtattttggag
agcacagccagctcatctgatctggagtcagttcttctggagatctatggtctgaaggac
ttcctggataagaactcccagttcagcccctcgtctctgggtacagccagttttagctca
cctgccaatctgcagcagcggctgcaaggattcatgcggcctgatggaggagccagttct
cagcaagttcagcaggaactccagaggaagtaccacaccgaggctcaggtctatgagaag
atgtccctgcagggtatccagcagctggtgcatcgttcctgtcagaccctggccctgtgg
aagctgctgtgtgaccaccagttcagcctcattgtctctgaactacccaaggagttccag
gaccagatgaagggggtgagttttaaggacgtggtgatctggggtcgggtgctgaccgaa
gccctgatcacaggcctcatcaatgtccacatcaaagactttgcctctgtagatgccata
agcacccacctcagagacatctgtcccctactgtacagcagtgacgacagcatctgttca
aatgctaatgagttgcagcagggctccagacagatccataataggacagataaggagaga
acactgagagagtcactacagctctaccagctgatcagccatcacacagacctgccactg
gtctgctcccagtacagacaggtgcgtttctatgagggagtgctggagctgtgcctgact
gcagcggataagaaggatcctcagaggctgagacctcgcatctataagaacggagagcca
gaggaggatcagactggagcactggccttccaggagaggttgtcatgttataagtgtatc
acagaaaccatacaggacctggtgaaccaaagtaaagctgcacctcagtctcccagcgtc
cctaagcagccaggaccccctgtcatgacctctgaccctaacatgctgagtaacgaggat
gccaccgcccattttgagcagattatttgtctggcccagaggtcacaggatgaactcttc
cacatagccctctacaactggcttatacaggctgacctcaccgacaagcttctggaggtg
aactctccttatctggaggatcacctgatgcacatgatcaaacaggagcagagtaaggtg
cggaacatggacctgctgtggagaaactacgagaagagttgcagctttggggcatcagct
cacgtcctggccaggcttgcagacatgctcagtactgagatctcgctgaagcagaggctg
gagtacatctccagggccatcctgtcagccaagagctcctcctgcatctctgcccaggga
gctgagggggagttcctgcaccaactggaggagaagatggaggtggtccgtattcaggtc
cagatcgaggatactctgagcagacagtacccccagcatccctctgtacagggagccgtg
tcacaactggattcagagcttatggacatcaccaagctatatggggagtttgcagatcac
ttccggttgcctgaatgcaagctggccatcatccactgtgcgggtcactctgaccccatc
ctggtgcactctctgtggcaggaggtcatggagaaagagctgggtgacagtttggccaag
agtccagctgacagaatgagcgctctgaatctcaaactggtgtctcttggaaagatctat
gctggaacacccagatacttccctctagaattcctggtgaagtttttggaacaggtggtg
tgtcgtctgaactggaacgtgggcttcgtcacgttcaccatgcaggagataggcttacag
ctgacctgtctgctggcggtctatgaccaactcttcaagacacgggatccatgttggcag
cgtctaaagcagcctctccacctggtagagtgtatccatgtgctgctgtcaggatacgtg
gaggatcccagcaaagtaccaacatctgaccgacggcggttcactaatgtgtgtctggat
aacatctgtggttacctggtggagctgcagtccctgagtcccaacgctgccctgcagctc
accatcggcaacttcaaggccctgcaggccaagctggagaaagttcactaa
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