KEGG T10723: 135548146

Oncorhynchus masou masou (cherry salmon): 135548146

Entry

135548146         CDS       T10723

Name

(RefSeq) roquin-2-like

K15690

RING finger and CCCH-type zinc finger domain-containing protein

Organism

omm Oncorhynchus masou masou (cherry salmon)

Brite

KEGG Orthology (KO) [BR:omm00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:omm03000]
    135548146
   04121 Ubiquitin system [BR:omm04121]
    135548146
Transcription factors [BR:omm03000]
Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    135548146
Ubiquitin system [BR:omm04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    135548146

SSDB

Motif

Pfam:

Roquin_1_2-like_ROQ ROQ_II zf-CCCH zf-RING_5 zf-RING_UBOX zf-RING_2 zf-CCCH_4 zf_CCCH_4 Prok-RING_4 zf-CCCH_UNK zf-C3HC4 zf-RING_4

Other DBs

NCBI-GeneID:

135548146

NCBI-ProteinID:

XP_064833524

LinkDB

Position

11:complement(14118276..14163081)

AA seq 1094 aa
MPVQAAQWTEFLSCPICYNEFDSSGHKPISLGCSHTVCKTCLHKLHRKACPFDQTAINTD
IDHLPVNSALLQLVGAQAVESQAVTLSSAVEVGHYEVCRVCVEELALYLKPISGEKGVVT
LSPSVLSRPMQRKLVTLVNCQLVEEEGRLRAVRAGRSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPATQEDALKLVLLALEDGSALSRKVLVLFVVQKLEARFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRAYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLIHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNSLRPHLELLANI
DHNPDAAAAPWWEELESVMLAVKVVVHGLVEFIHNFSRKSHETAQPQPNSKYKTSICRDL
RQQGGCPRGSNCTFAHTQDELEKNRMRNKKISGVGRPFLLAQGSMGSGLSMEGGDSGEEA
CTGDLKSSDNEGSGSLKEGATPSQLMPRGEDMMEEMKRERSVLNGSTGSSRSSSGSMEQK
SISPPKTPVNSSSAPSPYGPGSRLECDSAHPKQHLMIRPLPQPPPHQPQSSELCYQDPQP
PYDVQPYQPASNYYPSAIHHHKPCVARFLRSSHVPESSLPPSMAPLYSEQYPSLPPPREH
AGPSPYGPPSVSQYGPLAPAHRGYAPLYDSRHMWRPQLYHREDARSNSLPPEVLHSSVYQ
PPLRERYASLDSPYCSAGEHRAALHRNSYGRFPLGCEDLFRRKQEQWAHHHHGNVNRLSQ
SSPVFTVDFGAEHDDGCGGQCMNCKFRGEENLSHYSPWSCGTISPFEPEHHKASAHSRSE
NLEVDNGERTRWLHTFDPYRHLKDEDPKGPIIPFGEGPIISKWGVISRASRTGYHTTDPV
QATACQGSNSTIPINFRDYGPHIGHGDYRWSSGGSDSSSHSSFLEGEQLAALRRSFSSGE
KAGAGRMLQTDYCKDTTQHQLDRDVELELSVLDVEDTVLQDNSQQSEKPLELRETHLLTP
PSSEPQRTQTDKLSADKMEAQLLKKMAFRRSLSPGGLGSGGLSVGKLMMRTGPLRLGDMG
PCPNTGPEMLLNGN

NT seq 3285 nt +upstreamnt +downstreamnt
atgccagtgcaggcggcccagtggacagagttcctctcctgccccatctgctacaacgag
tttgacagcagcggccacaagcccatcagtctgggctgctcgcacactgtgtgtaagacc
tgtctccacaagctgcaccgcaaggcctgtccgttcgaccagacagccatcaacactgac
atcgaccacctgccagtcaacagtgccctgctacagctggtgggagctcaggctgtggag
tcccaggctgtgactctgagcagtgctgtggaggtagggcactatgaggtgtgcagggtg
tgtgtggaggagctggctctctatctcaaacccatcagtggagaaaaaggtgtggtgacc
ctcagtccgagcgtgctcagtcggcccatgcagaggaagctggtgacactcgtcaactgt
cagctggtggaggaggaggggcggttgcgggcggtgcgggcgggcaggtcgctaggggaa
cgtaccgtcacagagctcatcctgcagcaccagaacccacagcagctctctgctaacctg
tgggccgccgtcagagcacggggatgccagttcctggggcctgccacgcaggaggatgct
ctgaagctggtactgttggcgctagaggacggctcagctctgtccaggaaagttcttgtc
ctttttgtggtccagaagctggaggctcggtttcctcaggcctccaaaacctccatagga
catgtggtccagctactctacagggcctcctgctttaaggtgaccaagcgtgacgaggac
tcgtcgctgatgcagctaaaggaggagttccgtgcgtacgaggcgctgcgtcgcgagcat
gacgcccagatcgtacacatcgccatggaggcggggctccgtatctcccctgaacagtgg
tcctctctgctctatggagacctcatccacaagtcacacatgcagtctatcatcgacaag
ctccagtctccagagtcctttgcaaagagtgtccaggagctgacgatagttctacagaga
acaggagacccagccaatctgaacagcctcagaccacacctggaactactggccaacatc
gaccacaacccagatgcagcggcggctccgtggtgggaggagctggagagtgtgatgctg
gcggtgaaggtggtcgttcatggtctggttgagtttatacacaacttcagtaggaagagc
catgagacagcacagccgcagcccaacagcaaatataagaccagtatctgtcgagacctc
cggcagcagggtggctgtccccgaggatccaactgcaccttcgcacacacacaggacgag
ctagagaagaacagaatgagaaacaagaagatcagtggcgtgggccggcccttcctcctg
gcccaggggagtatgggtagtggtctgagtatggaggggggcgactcaggagaagaggcc
tgcactggggacctgaagagctcagacaatgaggggtcagggtccctaaaggagggggcc
acaccctcccagctcatgcccaggggagaggatatgatggaggagatgaagagggagagg
tctgtacttaacggatccacaggctccagccgatcctcatctggctctatggaacagaag
tctatttctcctccaaagacaccagtcaattcctcctcagctccttctccctatggcccc
gggtctagactagagtgtgactctgcacaccccaaacagcacctaatgataagacccctt
cctcagccccctccccaccaacctcagtcctctgaactgtgttaccaggacccccaacct
ccctacgacgtgcagccctaccagccagccagtaactactacccctctgcgatacaccac
cacaaaccctgcgtggctcgcttcctccgttccagccacgtcccagagtcctctctgcct
ccctccatggcccctctgtactcagagcagtatccctccttgcccccaccacgggagcac
gctggtccctctccctacggtcccccatcggtctcccagtacgggcccctggccccagcc
caccgtggctacgctcccctgtatgacagccggcatatgtggaggccccagctgtaccac
cgagaggacgccaggagtaactcgctgcctcccgaggtgctgcactcctctgtgtaccag
cccccccttcgagagagatacgcctccctggacagcccctactgctcagcgggggagcac
agagcagcactgcacaggaactcttatgggcgttttcctcttggatgcgaggatctgttc
aggcggaaacaggagcagtgggcacaccatcaccacggcaacgtgaacaggctctcccag
tcctcccctgtcttcaccgtagactttggtgcagagcatgatgacggttgtggtggtcag
tgtatgaactgtaagttccgtggagaggagaatctgtcccactactctccctggtcctgt
ggaaccatcagcccctttgaaccagagcatcacaaggcctcagctcactcccgctccgaa
aacttagaagtagacaatggtgaaaggacgcggtggctacacacgtttgatccctaccgc
catctgaaagacgaggaccccaaggggcccatcataccgtttggagaagggcctatcatc
tccaaatggggggtgatatcccgcgcctcccgtacaggataccacaccaccgacccggtc
caggccacagcctgccagggaagcaacagcaccatccccatcaacttcagagattatggt
ccacacatcggccatggggactacaggtggagctccggggggtctgactcttccagccac
tccagtttcctagagggtgaacagctagccgcccttcggcggtccttcagcagtggagag
aaggctggtgcaggacgcatgctgcagactgactactgtaaagacacgacacagcatcaa
ctggacagagacgtagaactggagctgtctgtactagacgtagaggacactgtcctgcag
gacaacagtcaacagtctgagaagcccctggagctgagagagacccacctcctcacccct
cccagcagtgaaccccagaggacacagacagacaagctgtcagcagacaagatggaagct
caactgctgaagaagatggccttcaggaggtctctctcccctggaggtctgggctcagga
ggcctcagcgtggggaagctgatgatgaggaccggccctctgagactgggggacatgggc
ccttgccctaacacaggtcctgagatgctgctgaacgggaactga

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