Oncorhynchus masou masou (cherry salmon): 135548309
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Entry
135548309 CDS
T10723
Name
(RefSeq) PDZ and LIM domain protein 5-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135548309
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omm04990
]
135548309
Domain-containing proteins not elsewhere classified [BR:
omm04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
135548309
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GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
PDZ_2
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-GeneID:
135548309
NCBI-ProteinID:
XP_064833846
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Position
11:complement(21644727..21761438)
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AA seq
623 aa
AA seq
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MNSNYSVSLGGPAPWGFRLQGGKDFCLPLTISRLTDGGKAAKAKMSVGDVVLSIDGIATN
GMNHLEAQNKIKACTDNLNLTLQKASSVPKADTPKDEPLEIIKPVPITHPAPPFTSPSPQ
PGAAYNKTARPFGGGSNVGAVTSSLTTPKVASIPSASSAFTPAAPSSQQPQPPFPLASRS
PAPPSSAPPPRPGSGRSPFTTPSSTPSSSSSSSPARVTAPSSNPGAPQSSCYNTPINLYS
NANACEVAIGQRRGLLEAQGVVVDQIKEQFNGNRVEPELTHASPLSEASKKRLIEDTEDW
HPRTGTSQSRSFRILAQITGTEKDQGAQENSAGKNKVVENAPPSGHITTSVKTMTKVPGA
PRNGSSVPPSTFKTPSAQVKPSWPAGGSAGFSKGGAAPCFGRVSNTAPVPAVPKVSDRPA
PQAHPKDQNSLVQRAEHIAAGTRTPMCGHCDKVIRGPFLVAMGMSWHPEEFNCSHCHMSL
VESGFVEERGTVYCAHCYEKFFAPTCTSCQQKVLGEVINALKQTWHVYCFLCASCQQPIG
NNTFHLEDGLPYCERDYYQLFGTSCHGCDFPIEAGDKFLEALGFTWHDTCFVCAVCNTSL
EGQAFFSKKDKALCKKHANTVQI
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaactacagcgtctccctgggtggccccgccccctggggcttcagactgcag
ggaggaaaggacttctgtctgcccctcactatctcacggctgaccgatgggggcaaagca
gccaaagccaaaatgagtgtgggagatgtagttctgtctatcgacggaatcgccaccaac
ggcatgaaccacctggaggcccagaacaagatcaaagcctgcactgacaacctcaacctc
accctgcagaaagcttccagtgttcccaaggctgatacaccaaaggatgagccactggag
atcattaagcctgtgccaatcacccatccagctccgcccttcaccagcccctccccccaa
cccggtgctgcctacaacaagacggcccgcccctttggcgggggcagcaatgtgggtgca
gtcacttcctccctgaccaccccaaaggtggcctccatcccctctgcatcgtctgctttc
acccccgccgccccctcctcccagcagccccagcctcccttcccactagctagccgctcc
ccagccccacctagctcggccccaccccccagacccggctctggccgttcccccttcacc
accccctcctccactccctcctcttcttcctcatcctccccggctagagtgacagccccc
tcctccaatcccggtgctccgcagtcctcttgctataacacgccaataaacctgtactcc
aatgccaatgcctgtgaggtggccataggacagaggcggggcctgttggaagcccagggt
gtggtggtcgaccagatcaaagaacagtttaatgggaacagagttgaaccagagttgacc
cacgcctcgcccctcagcgaggccagtaagaagcgtctgatcgaggacacagaggactgg
catcctcgcaccggaacctcccaatccaggtccttcagaatcctggctcagatcaccggc
acagagaaagaccaaggagcccaggagaacagcgctgggaagaataaagttgttgagaat
gccccgcccagtggccacatcacaacatcagtgaagaccatgaccaaagtcccaggagcc
cccaggaatggcagcagtgtcccgccatccaccttcaagaccccgtctgcccaggtcaaa
ccctcctggccagctggaggttcagcaggtttctctaagggtggcgctgcgccctgtttt
gggagggtcagcaacactgcaccagtacccgcagtacccaaagtttctgaccgccctgcc
ccccaggcacaccctaaggaccaaaactccctggtacagcgggccgaacacatcgcagcg
ggaacacgcacccccatgtgtggccactgtgacaaggtcatcagaggtcctttcctggtg
gccatgggcatgtcctggcaccctgaggagtttaactgttcccactgccacatgtctctg
gtggagtctggcttcgtggaggagaggggaacagtgtactgtgctcactgctatgagaag
ttctttgcccctacctgcaccagctgccagcagaaggtcctgggggaagtcatcaatgcc
ctgaagcagacatggcatgtgtactgcttcctgtgtgcgtcctgccagcagccaatcgga
aacaacaccttccacctggaggacgggctgccatactgtgaaagagactactatcaactc
tttggtaccagttgccatggttgcgactttcccatcgaggcaggagacaagtttctggag
gcgttgggattcacctggcatgatacctgctttgtgtgtgcagtctgcaacaccagtttg
gagggccaagccttcttctctaaaaaggacaaggctctgtgcaagaaacacgccaataca
gtccagatctga
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