Oncorhynchus masou masou (cherry salmon): 135548362
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Entry
135548362 CDS
T10723
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omm03021
]
135548362
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
135548362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_16
TPR_CcmH_CycH
TPR_8
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
ARM_TT21_5th
TPR_6
TPR_Slam
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
135548362
NCBI-ProteinID:
XP_064833963
LinkDB
All DBs
Position
1:66473241..66482489
Genome browser
AA seq
1154 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQTKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLSKLEKARLAFGRALELNSKCVGALVGLAV
LELNSKEPDSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLER
AKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLYAANGIGAVLAHK
GYYREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKHQNTEVL
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRYFSYLAKAGDKMRFDLVLASTEARQCSDLLSQAQYHVARARKQDEEEKE
IRAKQDQERDFLRQQMHKEQEEKRTKQEEDQKKLLEQRAMYVEKTKGLLSFADGMKEERK
EKKKGGGRRKKGGDFDEFVNDGSDEDLPVRRRKKRKGGSGSEEEGRKKRRRPNKGGDDGS
DDEEGGSRPKKQRKPRAGGKKFQRAEPVPPSLKGKIKSKAIISSSDSSSDEDGLKIAEDR
NPRDSGSGSDNEGSHKKRIASDSESDGGRNRSGSDAGSPQRSENSGSDSGSERPVKRKRV
QQQSDSEQSDNESKRSRSGSENESRPGSPAAASGSEAGSPAGSPAGSPRRSDNGSEPGGS
ANEASNHGSGSDSD
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggttcaattgaaatccccttacgggacaccgacgaggttattgagcttgat
ttcgaccagttgcccgaaggagatgaggtcatcagtatcctgaaacaggagcatacacag
ttgcacatatggattgctcttgctctggagtattacaaacagacaaagacggaggacttt
gtcaagctgctggaggcggcccgtatcgatgggaacctggactacagagaccatgagaag
gatcagatgacctgtctggacaccttggcagcctactatgtccagcaggcacgtaaagag
aagaacaaagatgccaagaaggagctcatcactcaggccaccctgctctacaccatggca
gacaagatcatcatgtacgaccagaaccacttgttgggaagagcctgtttctgtctgctc
gagggggacaaaatggaccaggctgacgctcagttccactttgtcttgaatcagtccacc
aataacatccctgctctacttggtaaagcttgcatctccttcaataagaaggattacagg
ggagcactggcctactacaagaaggctctgcgcacaaaccctggatgtcctgccgaagtg
aggctggggatgggccactgctttgtcaagctcagtaagctggagaaggcccgtctggcc
tttggcagggccctggagctcaactccaagtgtgtgggagcccttgtgggcttggctgtg
ctggagctcaacagcaaggagcccgactccatcaagaatggagtgcagctcttatccaga
gcctacaccatcgaccccagcaaccccatggtgctcaaccacctagctaaccacttcttc
ttcaaaaaggactacagtaaagtgcagcacctggctctccatgcctttcacaacacagag
gtggaagctatgcaggctgagagctgctaccagttggcccgctcctttcatgtacaggag
gactatgaccaggccttccagtactactaccaggccacccagtttgcctcgtctaccttt
gtgctgcctttctttggcctggggcagatgtacgtgtaccgtagagacaaggagaatgca
gcccagtgctttgagaaggtcctaaaggcctaccccaacaactatgaaaccatgaagatc
ctgggctctctttatgctacttcagatgatcaggaaaagagagacattgccaaaggtcat
ctgaagaaggtgaccgagcagtaccctgatgacgtggaggcctggatcgagctggcccag
atcctggagcagaccgacatccagggcgccctctctgcctacggcacggccacccgcatt
ctgcaggagaaggtccaagctgacgtcccccctgagatcctcaacaacctgggggctctc
cacttcagactggggaacctgggagaggccaagaaatacttcctggcttctttggagcgg
gccaaagctgagggagagcatgacgagcattactacaacgccatctctgtcaccacctct
tacaacctagcccggctctacgaggccatgtgcgaattccacgaggcggagaaactctac
aagaacatcctgagggaacatcccaactacgttgactgttacctgcgtcttggcgcaatg
gctcgtgacaaaggaaacttctatgaagcttccgactggttcaaagaggctctgcagatt
aatcaggatcacccagacgcctggtccctgatcgggaatctccacttggccaagcaggag
tggggtccgggtcagaagaagtttgagcgtatcctcaagcagccgtccactcagaacgac
acttactccatgctggccctgggcaacgtgtggctccagaccctgcaccagcccactagg
gaccgggagaaggaaaagagacatcaggatcgagccctggccatttacaaacaggtccta
cgaaacgactccaagaatctttacgctgccaacggcataggtgccgtcctggcccataag
ggctactaccgagaggcccgtgacgtgtttgcccaggtgagagaagccacagctgatatc
agtgacgtctggctcaacctggcccacatctacgtggagcagaaacagtacatcagcgct
gtgcagatgtacgagaattgtctgaagaaattctacaagcatcagaacactgaggtgctg
ctgtacctggctcgggcactcttcaaatgcgggaaactccaggagtgcaaacagactcta
ttgaaggcgcgtcacgtggcccccagtgacacggtgctgatgttcaacgtggccctggtg
ctgcagaggctggccactctggtgctgaaggacgagaagagtaacctaaaggctgtactc
agtgctgtcaaagagctggagctggcccaccggtatttcagctaccttgccaaggctggt
gacaagatgaggttcgacctagtgcttgcctccactgaggccaggcaatgctctgacctg
ctgagtcaggcccagtaccacgtggctcgggccaggaagcaggacgaggaggagaaggag
atccgggccaaacaggatcaggagagggacttcctgcgccaacagatgcataaggaacag
gaggagaagagaaccaagcaggaagaggatcagaagaagctgctggagcagagagccatg
tatgtggagaagaccaagggtctgctctcctttgccgatggaatgaaggaagaaaggaaa
gagaagaagaaaggtggaggccgacgcaagaaagggggtgactttgatgagtttgtcaac
gatggctctgatgaggacctgccagtgagaaggaggaagaagaggaagggtggcagcgga
agtgaggaggagggccgcaagaagaggaggagacccaacaaagggggtgacgatggcagc
gatgacgaggaaggaggctcacggcccaaaaagcaacgcaaacccagagcgggcggcaag
aagttccaaagggccgagcctgtgccaccgtctctcaaaggcaagatcaagtcaaaggcc
atcatctcatcctctgactcttcatcagacgaggatggactgaaaattgccgaagaccga
aaccccagagacagtggttcaggctctgataatgagggcagccacaagaagcgcatcgcc
tccgacagtgagtccgacgggggccggaaccgctctggcagcgacgctggaagcccccaa
cgctccgaaaactcgggtagcgactcaggcagcgaacgtccagtgaagaggaagagagtg
cagcagcagtctgactcagagcagtctgataacgagagcaagaggagccgctctgggtca
gagaacgagtcccggccaggctcaccagccgcagcctctggctctgaagcgggctctcca
gcgggctccccggcaggctccccacgccgctccgacaatggatcagaaccagggggttct
gccaacgaggcctccaaccacggctctggctctgacagcgactga
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integrated database retrieval system
