Oncorhynchus masou masou (cherry salmon): 135548540
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Entry
135548540 CDS
T10723
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135548540 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135548540 (nup98)
03036 Chromosome and associated proteins [BR:
omm03036
]
135548540 (nup98)
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135548540 (nup98)
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
135548540 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
135548540
NCBI-ProteinID:
XP_064834327
LinkDB
All DBs
Position
11:complement(31923461..31947347)
Genome browser
AA seq
1852 aa
AA seq
DB search
MFNKSFGAPFGGGTGGFGTSSTFGQQNTGFGATTGGFGASAFGATNNTGGLFGATQNKPV
VTANPQQIHTGAGRGGGLFGSSTFSQPVTSSTSSGFGFGTASGTSTSLFGSTNTGGGGGL
FSQQSNAFGAAKPASFGTFGTSTANTGGLFGATNSNPFGGASASLFGASGFTQQAAQPGT
TVKFNPATGSDTMVKGGVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPTNPMA
APTGGLFGTAAAATPSTGAAGLFGSSATNTGFSFGQAKTNFGTSTGGFGTATGSLFGQQQ
QPQQAQQAASLFKPFGQTTTTPNTGFSFGNTSTMGQPQQTSTMGGLFGSTAASQAGGLFG
NTAQTTPATGFGTGTGLFGQTNTAFGNVGTQQSLFGNKTAGFGATTTSASSFGTGTGLFG
NKSALTLGTGTNPSNFGFGPTAAGGSLFGNKTAAGGLGTGLGAGFGAAVGTGQMSLFGNN
KTLGSTLGTIGAFGPQGFSTGTSTLGFGAQQQPVALTDPNAAAAQQAVLQQQINALAYSP
FGDSPLFRNPLSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPATRVRPKALTSSGSSK
SQLFDGLDDDEPSLTNGAFMPRKSIKKLVLKNLNGSSLYSSPINRDTDDLASPPEYPLNG
LSASVDEDDYVREVVEGGAEDDLEINKFYTKPSLQDTISELNAHRVGARGRNGLEVSSED
ISLGEDSIQEEREEEVQEVPPHPAGIVLCRVGYYTIPAMDELAKMVDENGVCVVENFTVG
RKGYGSVFFHGEVNVTGLNLDEIVHFRRKEVIVYPDDKNKPAEGEGLNRRAEVTLDGVWP
NDKTTCTQIKNPERLSEMNYEGRLENASRKQGARFLEYRPETGSWVFEVAHFSKYGLQDS
DEDEEVPLKVDPKKLKTATTLPPGLQQLPPSQQQVAPQAQSTAVLELLSRMSEVDSDMAD
ITQDAPGESMLEEVGESGMGEDKGSRLGTVTPTEHNPVSASSQIASSMGINPHTLQIMKA
SLFAEDDDGDMFLEQGGIKSSLDRASPRILLPGTQGRPSIGGLLQTRFSGAGLFPQLPDV
PFGGGLPGRLSLSRPSAVVPEPSRLSPWPSLGPSFLLPAPAAEATVRTVGARRLGGPVAP
ENSVTLGKGRLLMDAALFTGRSFRVGWGPGWTLVHCGDRLSGAGDKEQDQGDTGGFGFFP
KHAKSKRLSDSPFKVVIEQVVGLEPRDSEESQAVYQRPLEIGLKHSTISTEGACPFIQPQ
SGVAALHEYVEWITDLNQEAGAGDGVLAHWALVWTLCEALWGRLGTTEPEPGTSGYLQQL
ERRRSFSAWLSHSATQRIEQEVGLSHGGGHVEAIFSYLTGHRISDACRLAQKSGDHRLSL
LLSQAVGSQYGRELLALQLGDWNRMQTDSFLQEERLRIFALLAGKPVWQSTDCVVNVCSE
LDWKRCVAVHLWYMLPPTASIADALAKYEAAFQGSAEGQKYACAPLPPYLDQSVPLDMEE
EESKRPLYDICFHLLKLYSDRHYSLQELLDPLTVTWERLDYRLSWHLWSVLQALHYTHLS
PARQGLIHTSYAAQLESAGLWDMAIYVLLHISEDMLRERAVREMLQLHCPLLETEESAQK
ERFLTERLLIPEQWLHLAKATRARRETDRHREALHLYRAGHWNLCHRLVIQHLASGVYTR
ARAHTHTHTSNPIQPVCVSPIDCIINDNHEYLLEFLEGLAVPERCAVIQDWDTAGRVYLD
YIRVIQTLHAIQQMDSAGYKLERLHTEVTSLCSRIELLPCSSAKDRLAQSEMAKRVANIL
RVVLSLQQGGEGGEIPLSQLAPHIGRLPMPEDYALEELRSLTQSYLRQLIVS
NT seq
5559 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcatttggtgctcctttcgggggagggaccggaggatttggaacttca
tccacgtttggacaacaaaacactggctttggggcgacgacaggtggcttcggggcctca
gcatttggggcgaccaacaacactggaggactctttggtgcgacgcagaataaaccagtg
gtgacggccaatcctcaacaaatccacactggtgcaggtagaggaggtggcctgtttggt
tccagtacgttcagccagcccgtaacgtcgtccaccagtagcggctttgggtttggcacg
gccagcggcacgtccactagcctgttcggcagcaccaacacgggcggcggcggaggactc
ttctcccagcagagcaatgctttcggagccgccaaaccagcctcctttggcacgtttggc
acgagcacagccaacaccggggggctgtttggggcgaccaactccaaccccttcggaggg
gcgtctgcctccctgttcggagcttcagggttcacccagcaagccgctcagccaggcacc
actgtcaagttcaaccctgcaacaggaagtgacaccatggtgaaagggggtgtgaccacg
agcattaacaccaagcaccagtgcatcacggccatgaaggagtacgagaacaagtcactg
gaggagctgaggttggaggactaccaggcaggaaggaagggccccactaaccccatggct
gcaccaacggggggtctctttgggactgcggccgcagctacccccagtacgggggctgca
gggctgtttggctcctcggccaccaacacaggattttccttcggccaggccaaaaccaac
ttcggcaccagtactggtgggtttggtacagccacaggcagtctgtttggccagcagcaa
cagccccagcaggcccagcaggcagccagcctgttcaagcccttcggtcagaccacaacc
acacccaacacaggattctccttcggcaacaccagcaccatgggccagccccaacaaacc
agcaccatggggggtctgtttgggagcaccgcggcgtcccaggcaggggggttgtttgga
aacacagctcagaccacaccagccacaggctttgggacaggcaccggtctctttggacaa
accaacaccgccttcgggaacgtcggcacacagcagagcttgtttggtaataagacggca
gggtttggcgccaccaccaccagcgcctcgtcgtttggcacaggcaccggcctctttggt
aacaaatccgccctcaccctcggaaccggcaccaacccatctaactttggttttggaccc
actgctgctggcggaagcctctttgggaacaagacggcagcaggaggactggggaccggg
ctgggagctggctttggagcagcggtgggcactgggcagatgtctctgtttgggaataac
aagacactgggttccactctgggaacaataggagcgttcggaccgcagggattcagcaca
ggaaccagcactctgggcttcggggcacaacaacagcctgttgcgctgacggaccctaac
gcggcggcggcccagcaggcagtgctgcagcagcagatcaatgctctggcctactccccc
tttggtgactcccccctcttcagaaaccccctctctgaccccaaaaagaaggaggagcgt
ctaaagcccaccaatccggcagcccagaaggcgttgaccacgcccactcactacaagctg
acgccgcggcctgcgacacgtgtgcggcccaaagctcttacatcttcgggctcctccaag
tctcagctgtttgacgggctggatgatgacgagccttctctcaccaatggagccttcatg
cccaggaagagcatcaagaagctggtgctgaagaacctgaatggcagcagcctgtacagc
agcccaatcaacagagacacagatgacctggcatctccaccggagtaccccctcaatgga
ctcagtgccagtgtggacgaggatgattatgtgagggaggtggtggagggaggggcagag
gatgacctggagatcaacaagttctacaccaagcccagcctgcaggacaccatctcagag
ctcaatgcccatagggtgggggccaggggcaggaatggcctggaggtgagcagcgaggac
atatcgctgggagaggactccatacaggaggagcgagaggaggaggtgcaggaggttccc
ccacaccctgcaggtatcgttctgtgccgtgtgggctactataccatccccgccatggac
gagctggccaagatggtggacgagaacggcgtgtgtgtggtggagaacttcaccgtgggc
agaaaaggttacggctcagtgtttttccatggcgaggtgaatgtgactgggctgaacctg
gatgagattgttcacttcagacgcaaagaggttatcgtctaccccgacgacaagaacaag
cctgctgagggggaggggctcaacaggcgagcggaggtgactctggatggggtttggcct
aatgataagaccacttgtactcagataaagaaccctgagcgtctgtctgagatgaactac
gagggccgtctggagaacgcctcacgcaaacagggtgcccgcttccttgagtaccgcccc
gagaccggctcctgggtgtttgaagtggcccacttctctaagtatggcctgcaggactct
gatgaggatgaggaagtgcctctcaaagtggaccccaagaagctgaagacggccacaaca
cttcccccggggctgcagcagcttcctccctcccagcagcaggtggcgccacaggctcag
tccacggctgtgctggagctgttgagccgcatgtctgaggtggacagtgacatggccgac
attacccaggatgccccaggggagagcatgttggaggaggttggggagagcggcatgggg
gaggataagggcagtcggctgggtactgtgacccccacagaacacaaccctgtctctgca
tccagtcagattgcctcctcgatgggaatcaaccctcacactctccagatcatgaaggca
tctctttttgctgaggatgatgatggtgacatgttccttgaacagggagggatcaagagc
tctctagacagggcctcccctcgcatcctcctgcctggcactcagggcaggccctccatc
ggtggtctcttgcagactcgtttcagcggggcaggtctcttccctcagctccctgacgtg
ccctttggagggggccttcccgggaggctgtccctgtctcggccgtccgcggtggttcct
gagccctcgcggctctccccctggccctcactggggccctctttcctgctgccggcccca
gcggcagaggccactgtacggacggtgggggctcggcgcctggggggccctgtggcccca
gagaactcagtcacactggggaagggtcgtctgctgatggatgcagctctgttcacgggc
cggtcgttccgggttggctggggtccaggctggactctggtccactgtggagacaggctg
agtggggctggggacaaggaacaggaccagggagacactggaggttttggattttttcct
aaacatgccaagagcaaacgactctcagacagtccgttcaaggtggtgatcgagcaggtg
gttggtctggagccgcgggacagtgaggagagccaggcggtgtaccagcggcccctggag
attggcctgaagcacagcaccatcagtacagagggggcctgccccttcatccagccccag
agtggggtggccgccttgcacgagtacgtggagtggattactgacctcaaccaggaggct
ggtgccggagacggggtcctggctcactgggctctggtgtggactctgtgtgaggccctg
tggggtcggctgggtacgacagagccagagcctggtaccagcggctacctgcagcagctg
gagaggaggaggagcttctcagcctggttgtcccacagcgccacccagaggatcgagcag
gaggtgggcctaagccatgggggaggacatgtggaggccatcttcagctacctcactgga
caccgcatcagtgacgcctgcaggctggctcagaagagtggggaccaccgcctctccctg
ctgctgtcccaggcggtgggctctcagtacggccgggagctgctggcgctgcagcttgga
gattggaacagaatgcagaccgactcatttctgcaggaggagaggctacgcatcttcgcc
ctgctcgccgggaaacctgtgtggcagtctacagactgtgtggtgaacgtgtgttcagag
ctggactggaagcgttgcgtggcggttcacctgtggtacatgcttcctcccactgcctcc
atcgctgacgccctggccaagtacgaagccgccttccagggctctgcagagggtcagaag
tatgcctgcgcccccctgcccccctaccttgaccaatcagtcccgctggacatggaggaa
gaagagtctaaacggccactctacgacatctgtttccacctgctcaaactatacagcgac
agacactacagcctgcaggagttgttggacccgctgacggtgacgtgggagcgtctggac
taccgcctgagctggcacctgtggtcggtcctgcaggcgctgcactacacacacctgagc
cccgcccgacagggcctcatacacaccagctacgctgcccagctggagagcgctggcctc
tgggacatggccatctatgtactgctgcacatatctgaggacatgctccgtgagcgtgcg
gtgagggagatgctccagctgcactgccctttgctggagacggaggagtcagcccagaaa
gagcgcttcctcacagaaagactattgatcccagaacagtggctccacctggccaaagct
actagagccagaagagagacagacagacacagagaggccctgcacctgtacagagcaggc
cactggaacctctgccacaggctggtcatacaacacctagcctcaggtgtgtatacgcgc
gcacgcgcacacacacacacacacacctctaaccctattcaacctgtatgtgtttcccct
atagattgtatcattaatgataaccatgagtacctgttggagttcttggaggggctggct
gttccagagcgctgtgctgtgatccaggactgggacacggcaggcagagtctacctggac
tacatcagagtcatacagaccttacacgccatacaacagatggacagtgctggttataag
ctggaacgtctacacaccgaggtgacgtcactctgcagcaggatagagctcctcccttgc
tcttccgccaaggaccgcctcgcccaatcagagatggccaagcgcgtggctaacatcctg
cgtgtggtgttgagtctgcagcagggtggtgagggtggcgagatccccttgtcccagcta
gcgccccacatcggccgtctgcccatgcctgaggactatgccctcgaggagctccgcagc
ctcacccaatcatacctgagacagctcattgtcagctaa
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