Oncorhynchus masou masou (cherry salmon): 135548590
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Entry
135548590 CDS
T10723
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04142
Lysosome
omm04144
Endocytosis
omm05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135548590
04142 Lysosome
135548590
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
135548590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135548590
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omm04147
]
135548590
Membrane trafficking [BR:
omm04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
135548590
Exosome [BR:
omm04147
]
Exosomal proteins
Proteins found in most exosomes
135548590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
TPR_ELP1
Motif
Other DBs
NCBI-GeneID:
135548590
NCBI-ProteinID:
XP_064834414
LinkDB
All DBs
Position
11:complement(35177480..35242584)
Genome browser
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMADPNT
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAGFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNNLFAGGNYSEAAKVAANAPKGILRTPDTIRKFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTNSLTELFESFKSFEGLFYFLGSIVN
FSQDAEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKSLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRRDPDLWASVL
LETNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
VQAADQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRAYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEFDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKATQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFFS
KVKQLPLVKPYLRSVQNHNNKSVNEALSNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELMEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLGWFLME
DKKECFAACLFTCYDLLRPDVVLETAWKHNIMDFSMPYFIQVMREYLSKVDKLETSESLR
KEEEQATETQPIVYGTPQLMLTAGPSVTVPPQQAYGYGYQAPAGYPQAPQAQPGFGYSM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggctcagattctgcctatccgctttcaggagcacctgcagctccaaaacttggggatc
aacccggccaacatcgggttcagcaccctgacgatggagtctgataagttcatctgtatc
cgggagaaggtgggcgagcaggcgcaggtggtgatcatagacatggccgaccccaacacg
cccatccgcaggcctatctctgcagacagcgccatcatgaaccccgcctccaaagtcatc
gcacttaaagccgccaaaacccttcagatctttaacattgagatgaagagcaagatgaag
gcccacaccatgaccgacgacgtcaccttctggaagtggatctccctcaacacagtggca
cttgtgactgacaatgccgtctaccattggagcatggagggggactcccagccaatcaaa
gtctttgaccggcactccagcctggcgggctgtcaaatcatcaactaccgcactgatgcc
aagcagaagtggctgctgctcatcggcatctccgcacagcaaaaccgtgtggtgggtgcc
atgcagttgtactctgtggacagaaaagtgtcacagcccatcgagggccacgctgccggc
ttcgcccagttcaaaatggagggcaacacagaggagtccacactgttctgctttgctgtg
agaggacaggccggaggaaagttgcacatcattgaggtgggcaccccacccacagggaac
cagccttttccaaagaaagcagtggacgtgttcttccctccagaggctcagaatgacttc
cctgtggccatgcagataagctccaagcaggatgtggtgttcctcatcaccaaatatggc
tacatccacctgtacgacctggagactggcacctgcatctacatgaacaggatcagcggg
gagaccatctttgtcacggccccacacgaagccaccgctgggatcatcggggtcaacagg
aaaggacaggtcctgtcggtgtgtgtggaggaggagaacatcatcccctacattaccaat
gtgctccagaacccagacctggccctgcgcatggctgtccgtaacaatctagctggggcc
gaggagctgttcgcacgcaagttcaacaacctgtttgctgggggaaactactctgaggct
gccaaggtggctgccaacgcaccaaagggtatcctgcgtactccagacaccatccgtaag
ttccagagtgtgccagcccagccgggccagacctctcccctgctgcagtactttggcatc
ctgctggaccagggccagctcaacaagtttgagtccctggagctgtgcaggcctgtccta
cagcagggacgcaagcagctgctggagaagtggctcaaagaggacaagctggaatgttct
gaggagctgggggacctggtgaagtcagttgaccccaccctggctctctccgtctacctg
agggccaacgtacccaacaaggtcatccagtgctttgctgagaccggacagttccccaag
atagtcctgtacgccaagaaggtgggctacactccagactggatcttcctgctgaggaac
gtgatgagaatcagtccagaacagggcctgcagttctcacagatgctggtccaggacgaa
gagcctctggctgacatcacacagatcgtggatgtgttcatggagtataacctaatccag
cagtgtacctcattcctattggacgccctgaagaacaacaggccatctgaggggccgctg
cagacacgcctactggagatgaacctcatgcacgccccacaggttgctgatgctatcctg
ggcaaccagatgttcaccaactacgaccgtgcccacatagcccaactgtgtgagaaggct
ggcctgctgcagagggctctggagcactacaccgacctgtacgacatcaagcgggccgtg
gtgcacacacacttgctcaacccagagtggctggtgaatttctttggctccctctcagtg
gaggactctctggagtgcctgagggccatgttgtctgccaacatccgtcaaaacctgcag
atttgtgtccaggtggcctccaagtaccacgagcagctctccaccaactccctcaccgag
ctcttcgagtccttcaagagcttcgagggtctgttctacttcctgggttccatcgttaac
ttcagccaggatgcagaggtccacttcaagtacatccaggctgcctgcaagacgggacag
atcaaagaggtggagaggatatgcagagagagcaactgctacgacccagaacgagtcaag
aacttcctcaaggaggccaagctcaccgaccagctcccgctcatcatcgtgtgtgaccgc
ttcgactttgtccacgacttggtcctctacctgtaccgcaacaacctgcagaaatacatt
gagatctacgtgcagaaagtgaaccccagccgtctgccggtggtgattggagggcttctg
gacgtggactgttctgaggacgtcattaagagtctgatcctggtggtcagaggacagttc
tccactgacgaactggtggccgaggtggaaaagaggaacaggctgaagcttctcctgccc
tggctggaggcccgtatccatgagggctgtgaggagcccgctacccacaatgccctggcc
aagatctacatcgacagtaacaacaaccctgagcgcttcctgcgtgagaacccctactac
gatagccgcgtggtgggcaagtactgtgagaagagggacccccacctggcctgcgtggcc
tacgagagaggacagtgtgaccaggaactcatcaatgtgtgcaatgagaactccctgttc
aagagtctgtctcgctacctggtacgtcgcagggacccggacctgtgggccagcgtgctg
ctggagaccaaccccttcagaagaccactcatcgaccaggtggtgcagaccgccctatct
gagacccaggacccagaggaggtgtcagtcacagtcaaggccttcatgactgcagacttg
cccaatgaactcattgagctactggagaagatcgtactggataactccgtcttcagtgaa
cacagaaacctgcaaaacctgctgatcctgacggccataaaggcggaccgtacccgtgtg
atggagtacatcaaccgcctggataattatgacgccccagacatcgccaacatcgccatc
agcaacgagctcttcgaggaggcattcgctatcttcaagaagtttgacgtcaacacatcc
gctgtgcaggttctgattgagcacattgggaacctggaccgtgcctatgagttcgccgag
cgttgcaacgagccggccgtgtggagccagctggccaaggctcagctgcagaagggcctg
gtcaaggaggccattgactcctacatcaaggctgacgacccctctgcctacatggaggtg
gtacaggccgccgaccagagtggtaactgggaggacctagtgaagttccttcagatggcc
cgtaagaaggcccgggagtcctatgtggagacagagcttatctttgccctggccaagacc
aaccgcctggctgaactggaggagttcatcaacggacccaacaacgcccacatccaacag
gtcggcgaccgctgttatgacgagaaaatgtacgatgcggccaagttactgtacaacaac
gtgtccaacttcggccgcctggcgtccaccctggttcacctcggggagtaccaggcggcg
gtagacggggcgcgcaaggccaacagcactaggacctggaaggaggtgtgcttcgcttgc
gtggatgggaaggaattccggctggcccagatgtgtggcctccacatcgtggtgcatgct
gatgaactggaggaactcatcaactactaccaggaccgtgcttactttgaggagctgatc
accatgctggaggcagccctggggctggagcgggctcacatgggcatgttcactgagctg
gccatcctctactccaaattcaaaccccagaagatgagggagcacctggagctcttctgg
tccagagtcaacattccaaaggttctgcgggcggcggagcaggcccacctgtgggcggag
ctggtgttcctgtacgataagtacgaggagtttgacaatgccatcatcaccatgatgaac
caccccacagatgcctggaaggagggccagttcaaagacattatcaccaaggtggccaac
gtggagctgtattacaaagcaacccagttctatttggagttcaagccgttgttactgaat
gacctgctcatagtgctgtcccccagactggaccactcccgtgctgtcaacttcttcagc
aaggtgaaacagctgcccctggtcaagccctacctgcgctcagtacagaaccacaacaac
aagtctgtcaatgaagcacttagcaacctcttcatcacagaggaggactatcaggctctg
aggacgtctatagatgcctatgacaacttcgacaacatctcgctggcccagcgcctggag
aaacacgagctgatggagttcaggaggatcgctgcgtacctcttcaagggtaacaaccgc
tggaaacagagtgtggagctctgcaagaaggacagactctacaaggatgccatgcagtac
gcgtcagagtccaaggacacggagctggctgaggagctgctgggctggttcctgatggag
gacaagaaggagtgctttgccgcctgccttttcacctgctacgacctgctgaggccagac
gtggtgctggagactgcctggaagcacaacatcatggacttctccatgccctacttcatc
caggtcatgagagagtacctctccaaggtggacaagctggagacctccgagtccctacgg
aaagaggaggagcaggcgacggagacccaacccatagtctatggcacaccccagctgatg
ctgactgctggccccagtgtgaccgtacccccccagcaggcctatggctatggttaccag
gcccctgcgggctatccccaggcccctcaggcacagccaggcttcggctacagcatgtga
DBGET
integrated database retrieval system
