Oncorhynchus masou masou (cherry salmon): 135548704
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Entry
135548704 CDS
T10723
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin-like
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135548704
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
135548704
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
135548704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF34L-like_3rd
SAP_RNF34_RFFL
FYVE_CARP1-2
zf-C3HC4_3
ARMET_C
Prok-RING_4
FYVE_2
RR_TM4-6
Pox_Ag35
SDE2_2C
Sigma70_ner
Motif
Other DBs
NCBI-GeneID:
135548704
NCBI-ProteinID:
XP_064834627
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All DBs
Position
11:complement(40492667..40504192)
Genome browser
AA seq
347 aa
AA seq
DB search
MWTSCCSWSCLEPTATVEENGSSWRQAYTNSGNSQSPISPELLCKACGGHFDTIAIKHVC
VDCKKNFCGRCSVQLEPPCPRLCHTCQRFHGTLFDRAQLMRLKVRELRDYLHLHEVPTQT
CREKEELVELVLGQQTPSTSRSSDTVSSQPGAHNNVPSPDTPSPPETQGPTSPDTLSPEQ
PEQSAPEAESEQISDEEEEEEEDEDEDEESSDSEETLMPGRRASLSDLSRVEDIEGLSVR
QLKEILARNFVNYKGCCEKWELMERVTRLYNDQKDLQNLVSNTKNEEDPAAPKSQEENLC
RICMDSPIDCVLLECGHMVTCSKCGKRMSECPICRQYVVRAVHVFRS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtggacatcctgttgtagctggtcctgtttggaacctaccgccacagtggaagaaaac
ggcagctcatggcgccaggcctacacaaactcgggcaacagccaatccccgatctctccc
gaacttttgtgcaaggcctgcggaggccattttgacaccatcgctataaagcatgtctgt
gtggactgcaagaagaacttctgtggccgctgctcggtgcagctggagccgccatgcccg
cgcctctgccacacatgtcagcgatttcacggaaccctcttcgaccgcgcccagttgatg
agactcaaggtgcgggagctgcgtgactacctccacctgcacgaggtgcccacccagacg
tgccgggaaaaggaggagctggttgagctggtcttgggccagcagacccccagcaccagc
agaagcagtgacaccgtatcctcccagcccggggctcacaacaatgtcccctccccagac
acaccgtcccctcccgagacacagggccctaccagccccgacacattgagcccagagcag
ccagaacaatcagcccctgaggcagaatcagagcagatctctgatgaggaagaagaagag
gaggaggatgaggatgaggatgaagagtcatcggacagcgaggagaccctgatgcccggc
cgcagagcctctctgtctgacctgagccgcgtggaggatatcgagggcctgagcgtgcgc
cagctcaaggagatcttggcccgcaactttgtcaactacaaaggctgctgcgagaagtgg
gagctgatggagagggtcacccgcctctacaacgaccagaaggacctccagaacctagtt
tcaaatacaaaaaatgaagaagaccctgcagctcccaagagccaggaggagaacctctgt
cggatctgcatggactctcccattgactgtgtgctgctggagtgtggccacatggtcacc
tgcagcaagtgtggcaagcgcatgagcgagtgccccatctgcagacagtacgtggtacgg
gcggtgcacgtcttcaggtcctga
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