Oncorhynchus masou masou (cherry salmon): 135548816
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Entry
135548816 CDS
T10723
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04080
Neuroactive ligand-receptor interaction
omm04082
Neuroactive ligand signaling
omm04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
135548816
04082 Neuroactive ligand signaling
135548816
04519 Cadherin signaling
135548816
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omm04040
]
135548816
Ion channels [BR:
omm04040
]
Ligand-gated channels
GABA-A
135548816
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
135548816
NCBI-ProteinID:
XP_064834836
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Position
11:complement(51670073..51711080)
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AA seq
451 aa
AA seq
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MAFVFTFFFLSCVSNVWGNNPKSTEIDGNIYLDNITRILDRLLDGYDNRLRPGFGGPVTE
VKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLKFEGPIEILRLNNLMVSKIWTPDTF
FRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLMNFPMDGHACPLKFGSY
AYPMSEIVYTWKKGPLFSVEVPEESSSLLQYDLIGQTVSSERLKSNTGEYVIMTVHFHLQ
RKMGFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKV
SYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQANRELRKVAAIKVAQEAAEAGRSDGE
SSSDASSMLKKRMNSTPHFERPAEVFPNPPVNAQAFLQQGSAVPSNNLLTGTSIIDKYSR
ILFPLSFGAFNLVYWIVYLTKDTMEMTRDSV
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggctttcgttttcactttcttttttctgtcctgtgtgagcaatgtttggggaaataat
ccgaaatcgaccgagattgatgggaatatctatttggataacattacgcgtatattggat
agattactggatggatatgacaacagactgcgacctggatttggaggtccagttaccgag
gtcaaaacagacatctttgtaaccagctttggtccagtgtcagatgttgagatggagtac
accatggacgtattcttccgtcaaacgtggattgacgagaggttgaaattcgagggcccc
atcgagattctgcgtctcaacaacctcatggtcagcaagatctggacgccagacacattc
ttccggaatggcaagaggtccatctctcacaacatgaccactcccaacaagctgttccgc
atcatgcagaacggaactatcctctacaccatgagattgactataaatgcagagtgtccc
atgcgactgatgaacttccccatggacggccatgcctgtcctctcaagtttggtagttat
gcctaccccatgagtgaaattgtgtacacatggaaaaaaggaccactattctctgtggaa
gtaccagaggagtcctccagcttgctacagtacgatctaataggacagacagtgtccagt
gagaggttaaaatccaacacaggtgaatatgtaatcatgactgttcacttccacctgcaa
aggaagatgggcttcttcttgattcagacatacatcccctgtatcatgacggtgatcctg
gctcaggtctctttttggatcaataaggaatctgttcctgctcgaactgtatttggcatt
accactgtgctaaccatgaccacactcagcatcagcgcccgccactctctgcccaaagtt
tcctacgccacggccatggactggtttattgccgtatgtttcgccttcgttttctcagcc
ctcatcgagtttgcagcagtcaactacttctccacgctgcaggccaaccgggagctccgc
aaggtggccgccatcaaggtagcccaggaggctgcagaggccgggaggagtgacggggag
tcctcttcggacgccagcagtatgctgaagaagaggatgaactctacgcctcactttgag
aggccggcggaggtgttccctaaccctccagtgaatgcccaggccttcctccagcaaggc
tcagccgtgccgtccaacaacttactgacaggcaccagcatcatagacaagtactctcgc
atcctcttccctctgtcgttcggggccttcaacctagtctactggatcgtctatcttacc
aaggacaccatggagatgacaagagacagcgtgtga
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