Oncorhynchus masou masou (cherry salmon): 135548825
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Entry
135548825 CDS
T10723
Name
(RefSeq) interferon regulatory factor 1-like
KO
K09444
interferon regulatory factor 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
135548825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135548825
Transcription factors [BR:
omm03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
135548825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
135548825
NCBI-ProteinID:
XP_064834856
LinkDB
All DBs
Position
11:complement(52765106..52769750)
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AA seq
310 aa
AA seq
DB search
MPVSRMRMRPWLEEKIESNTISGLVWVDKDNKIFSIPWKHAARHGWDLNKDACLFKQWAV
HTGKFIQGETKPDPKTWKANFRCAMNSLPDIEEVKDKSINRGSGAVRVYKMKNVHSKPNN
KRSKANTAKKNNKGSQIKTEGMAYSETICPEDLNTNTHPQEDSMTQESIVDSTDNLDDFT
FAPKCSTSVEIGPESTNNFYTSFQVSPDHRTDYEDSHQETLIEMTQHWEQGSVNDKGFLS
NEVDTSESFDTAESYHSPESQWSDNSGAEIELRLYTELISGLPIIDDIHPYTDYWSLNTS
SYPQQITCPL
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgtctaggatgagaatgagaccttggttggaggaaaagattgagtccaacacc
atcagtggattggtgtgggtggacaaggacaataagattttctccatcccatggaagcat
gctgcacgtcatggatgggacttgaacaaggacgcttgtctgttcaagcaatgggccgtg
cacacagggaaattcatacaaggcgagactaaaccggaccctaagacatggaaggctaat
ttccgctgtgcaatgaactcccttcctgacatagaggaagtgaaagacaaaagcatcaac
agagggagtggagcggttcgtgtctacaagatgaagaacgtccactccaagccaaataac
aagaggtcaaaagcaaacactgcaaagaaaaataacaaggggtcacagatcaagacagag
ggaatggcatacagcgaaaccatttgccccgaggacctcaataccaacacacacccgcag
gaggacagtatgacacaggaaagcatagtagacagcacagacaacctagatgatttcaca
tttgctccaaagtgttccaccagtgtggaaataggcccagaaagcaccaacaacttctac
acatctttccaagtgtcaccagaccaccgcacagactatgaagacagtcaccaagaaacc
cttattgagatgacacagcattgggagcaaggcagtgtaaacgacaaggggttcctgagc
aatgaagtagacacctcagagtccttcgacactgcagagtcttaccacagtccagagagc
caatggagtgataactcaggggcggaaatagagctgcgactttacacggaactcatctca
ggattaccgatcattgacgacatccacccttacaccgactactggtcactgaacacatcc
agttatccccaacagatcacatgcccactctga
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integrated database retrieval system
