Oncorhynchus masou masou (cherry salmon): 135549053
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Entry
135549053 CDS
T10723
Name
(RefSeq) iroquois-class homeodomain protein irx-1-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135549053
Transcription factors [BR:
omm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
135549053
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
135549053
NCBI-ProteinID:
XP_064835192
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Position
12:complement(25405545..25409380)
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AA seq
457 aa
AA seq
DB search
MSFSQLGYSQFLSGSQEVYGGDLAGLGRDGAADGGVNQAATAAAVSSMLGMYGNPWAAQN
YSAFLPYSGADLALISQMNTQYDLKDSPGAHPGGLAVHASAGFYPYGQYGYGDPNRAKAA
TRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWG
RSAEDRDGRIFSSDNEDEPEKHGSEDEEEEEIDLESIDIDKVEENPGDQREVEGEGKLAA
RDASDSGSLESQRTMSVKALRSMEGPISLIKAPVRDCKNAVDLSPNAPVCQRPPQNKPKI
WSLAETATSPDSSIKPSPAVSIAHQATIPSHHPALLPGHGIYTCQIGKQLHNWANAAFLS
ANSLLGVRSLLGAANPSGHHMPLHGALNHQDARLTQASGASCTEEESGDESLESFSPKRD
DDVNIRRSGSPKSPFQLITDRSHHGTAQRALSTISTI
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctcgcagctggggtactcccagtttctcagtggctcccaggaggtttacggg
ggcgacctggccggcttaggccgggatggagccgcggatggcggcgtgaatcaggcagct
actgccgctgctgttagctcgatgctggggatgtatggtaacccgtgggcggctcagaac
tacagcgcgtttctcccctacagcggtgcagacctcgcccttatatcgcaaatgaacact
cagtacgatctgaaggacagcccaggagctcacccgggaggtctggctgtccacgccagc
gcagggttctacccatacggccagtatggctatggcgacccgaaccgagccaaggccgct
acgagggagaccaccagcactctgaaggcctggttgcaggaacaccagaagaacccgtac
cccaccaagggagaaaagatcatgctggccatcatcaccaagatgacactcacacaggtg
tctacatggttcgccaacgcgcgccggcgtctgaagaaggagaacaaggtgacgtggggc
cgcagcgcggaggaccgggatggacggatcttcagcagcgacaatgaggacgagcctgaa
aaacacgggagcgaggatgaggaggaggaggagatcgatttagaaagtatcgacatcgat
aaagtcgaggagaacccaggagatcagagggaagtggagggagaggggaagctggccgcc
agggacgcatcggattctggtagcttggagagccagaggacgatgtctgtcaaggccctc
agaagtatggaggggcctatttctctcattaaggctcctgttcgtgattgtaaaaacgct
gtggatctttcccccaatgcaccggtgtgtcagaggcccccacagaacaaacccaaaatc
tggtctctggcagagacggccacaagccccgatagttccatcaaaccttccccggctgtc
tcgattgctcaccaggccacgatcccctcccaccacccggccctactcccgggtcatgga
atatacacatgccagatcgggaagcagctccacaactgggccaacgcggccttcctcagc
gccaactctctgctgggtgtcaggtcgcttctcggcgcggcaaacccatccggacaccac
atgcctctccatggcgcgttgaaccatcaggacgcacggttgacgcaggcctcaggggca
tcgtgcacagaggaggagagtggagatgagtcgttggagagcttcagtccaaagcgagat
gatgacgtgaatattcgcaggtctggctcgccgaagtctcccttccagctgattactgac
agatctcaccacggaacggcgcagcgggccctctcgacaatttccacaatatga
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