Oncorhynchus masou masou (cherry salmon): 135549054
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Entry
135549054 CDS
T10723
Name
(RefSeq) iroquois-class homeodomain protein irx-4-B-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135549054
Transcription factors [BR:
omm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
135549054
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Ortholog
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GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
135549054
NCBI-ProteinID:
XP_064835193
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Position
12:25488678..25493235
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AA seq
470 aa
AA seq
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MFDIMAYPQLGYPYSPTHPFLMSTSSLANCLEPGGRSLLDSGVMPTSPQPLRCPVYESRL
LGSPGQELPTPAIGLGVYGAAYGKSQGYYGTCGGDATALYARGTLESKDGAVAHVGASQT
PAYYPYDYAFGQYPYDRYGYGSSVDSAAARRKNATRETTSTLKAWLQEHQKNPYPTKGEK
IMLAIITKMTLTQVSTWFANARRRLKKENKVTWSPRANKSSDERGCDDDSDSAEGSQEEE
PIKSEIDVDDSVTARCVDLQHSDLEDFDLLESDGSDCDPKHQFHTKDTPVHTPPDHHHHP
KDPSTSPLRHTPDTSRHGNERLPLSADCPKHTPEHDRTTNSFYTQQDLQSTESSKPKIWS
IAQTAAIQPEFPACMHTATPSESLSPGGYPTEVPHLKVGAAGQQDSPVTTLRDWVDGVFH
DPLFRQSSFNPVLSKPAMDRAWIGLNRQVMEGRTLGQRSVEHVTSSLQNV
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatatcatggcttacccgcagttaggatatccctactcacccacacacccgttc
ctcatgagcacgagctctctggccaactgcctcgagcctggcggaaggtctctcctggac
tccggtgtgatgcccacctctccccagcctctccggtgcccggtgtacgagagcagactg
ctcggctcccccggccaagagctaccaaccccggctataggtctgggtgtgtacggagct
gcctatggaaagagccaggggtactatggcacctgcggaggcgacgcaacagctttatat
gccaggggaacattggagtccaaagatggagcggttgcgcatgtgggagcctctcaaacc
cctgcttactatccgtacgattacgcgtttggacagtatccatatgaccgatatgggtat
gggtcatcagtggacagtgcagctgcccggaggaagaacgctaccagggagaccaccagc
actctgaaggcctggttgcaggaacaccagaagaacccgtaccccaccaagggagaaaag
atcatgctggccatcatcaccaagatgacactcacacaggtgtccacgtggtttgccaat
gcacggcggaggctgaagaaggagaacaaagtcacatggtcaccacgagccaataagagc
tctgacgagaggggctgtgatgatgacagcgacagtgcagagggatcacaagaggaagag
ccaatcaaaagcgagatagatgttgatgattctgtaacagcgaggtgtgtggacctacaa
cacagtgatctggaggactttgatctgcttgagtcggatggttctgactgcgaccctaaa
caccagtttcacaccaaggacaccccagtacacacaccaccggaccaccaccaccacccc
aaagacccttctaccagcccactcagacataccccagacacatcccgacacgggaacgag
cggttgccactgtcagcagactgtcccaaacacacaccagagcacgaccgaacaaccaac
tcattttacactcaacaggacctgcaaagtacagagagcagcaaacctaaaatctggtcc
atcgcacaaactgctgctatccaacctgaattccctgcatgcatgcacacagccaccccc
agcgagtctctctccccaggggggtatccaactgaagtaccccacctgaaggtgggggcg
gctgggcagcaggactcgccggtgactaccctcagagattgggtggacggggtcttccac
gacccactgttcagacagagttcctttaaccctgtgttgtccaagccagccatggacagg
gcatggattgggttaaatagacaggtgatggaaggcagaactctgggacaacgttctgtt
gaacatgttacctcgtctttgcagaatgtatag
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