Oncorhynchus masou masou (cherry salmon): 135549531
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Entry
135549531 CDS
T10723
Name
(RefSeq) serine/arginine-rich splicing factor 6-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03040
Spliceosome
omm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135549531
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135549531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omm03041
]
135549531
Spliceosome [BR:
omm03041
]
Common components
Common spliceosomal components
SR proteins
135549531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
135549531
NCBI-ProteinID:
XP_064835631
LinkDB
All DBs
Position
12:complement(10618598..10627627)
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AA seq
386 aa
AA seq
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MSRVYIGRLSYRAREKDVEKFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKDL
CGERVIVEHTKGPRRDGSYGSGGGGGGGGGGGGGGRSGGGYGRGGRDRYGPPARTDYRLI
VENLSSRCSWQDLKDYMRQAGEVTYADTNKGRRNEGVIEFRLYSDMKRALEKLDGTEVNG
RKIRLIEDRPGAKRSKRSYSRSRSRSRSRSRRSRKSRSDSSSRSRSRGAGSRSRSRSHSK
KDKTKGSRDEERTNGAHKAKEGRGARSRSRSKSKKSSKKEGKKSRKDESRSRSRSRSAAK
DRSRKSGSKSREPAKSDDEGAAAEKGAVRSRSRSHTPAESKPKSKSKSPSPSPAKARSRS
PSVSRSESRSKSRSASRSRSRSLSES
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagagtttacattggaagattgagctatcgagcaagagaaaaggacgtggagaag
ttcttcaaaggctatgggaagatacttgaagttgacctgaaaaacgggtatgggtttgtt
gaatttgatgacccccgcgatgcagatgatgctgtgtatgacctgaatgggaaagacctg
tgtggggagagggttattgtggaacacacaaaggggccgcggcgggacggcagctatggc
tcaggaggaggcggaggaggaggtggtggcggcggaggaggtggaagaagcgggggtggg
tatgggcgtggtggcagagaccgatatggcccaccggcaaggacagactatcggctgatc
gtcgagaacctgtccagtcgctgcagttggcaagacctgaaggactacatgaggcaggcg
ggtgaggtgacgtatgctgacaccaataaggggcgcaggaacgagggagttatagagttc
aggctgtactctgacatgaagagagccctggagaagctggacggcacagaggtgaacggc
aggaagatccggctgattgaggaccgccccggggccaagcgcagcaagcgctcttactct
cgcagtcgatcccggtctcgctccaggagccgtcggtcccgtaagagccgcagtgacagc
agcagtcgctcacgctccaggggtgctggctcccgctcccgaagccgctcccacagcaag
aaggacaagaccaagggcagcagagatgaggagcgcaccaacggtgcccacaaggccaag
gaggggcgcggggcccgtagcaggagccgcagcaagagcaaaaagagcagcaaaaaagaa
gggaagaagagcaggaaggatgagtctagatccaggtcccgctccagatcagcagcgaag
gatcgctcccggaagtcgggctcgaagagccgcgagccggccaagagcgatgacgaggga
gctgcagctgagaagggggccgtccgttcccgctctcgctcccacacccctgccgaatcc
aaacccaagtcaaagtccaaatctccatctccctccccggccaaagcccgctcccgttcc
ccctccgtctcccgctcagagtcccgctccaaatctcgctccgcgtctcgttctcgctcc
cgctctctatcagagtcctga
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