Oncorhynchus masou masou (cherry salmon): 135549533
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Entry
135549533 CDS
T10723
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omm03019
]
135549533
04121 Ubiquitin system [BR:
omm04121
]
135549533
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135549533
Messenger RNA biogenesis [BR:
omm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135549533
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
135549533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
DUF5128
Filamin
zf-B_box
SGL
ANCHR-like_BBOX
zf-RING_UBOX
zf-RING_5
zf-C3HC4
zf-RING_2
zf-C3HC4_4
Ig_GEX2_N
Motif
Other DBs
NCBI-GeneID:
135549533
NCBI-ProteinID:
XP_064835633
LinkDB
All DBs
Position
12:10751042..10790770
Genome browser
AA seq
821 aa
AA seq
DB search
MASFSDSDLQTCLLCKELCGSSSTPISCNSSTSSSSSHSSSSSSRRLHVLPCLHTFCRQC
LEGQRSHGDPLKLSCPTCNQKVSVSDAAVDPLPSSNFLLGNLLDAEQLQLGQNKNGHRGV
GGCSVPRFPLAHSVLHPNRLGEPQCSSCGEGNPASFHCLDCQEYLCDNCVRAHQRVRLTK
DHFMESLQHASRGLASPIAGRGRGVGLSLTQPFQSNSSLLPLFQDRMSFCQHHDNKVFLF
FCETCSVPICRECSVGRHMGHSLVYLQDAVQDSRDIIIQLLADAQQGRQAVQLSMEKIQA
IAEQVDIKAKVVQTEVKNVVLRHLKALEDRESQLLWKVEKIQQLKAKSLYLQVEKLHQNL
TKLDSTITAVTQVLDEGCHLDVLLARERMLTQIQELKSLRGLLQPQEDDRLMFTPPDQAL
YIAIQSMGLISSGAFAPVTKAHGEGLKTALRGKTASFTVIGYDHDREPCLSGGDAVSAVV
MAAADGNLSAAEVCDNQNGSYTVSYLPKTEGEDLVSVLVCNQHIMGSPFKVLVRSGRRYG
ALGSPVSAFGSEGEGDGQLCRPWGISVDKEGYVVVADRSNNRVQIFKPCGAFHHKFGSLG
SRPGQFDRPAGVACDSQQQIIVTDKDNHRVQVFTFDGQFMLKFGEKGTKNGQFNYPWDVA
VNSAGKILVSDTRNHRVQLFGPDGSFINKYGFEGTLWKHFDSPRGVAFNHEDHLVVTDFN
NHRLLVIRPDCQSARFLGSEGTGNGKFLRPQGIAVDQENRIIVADSRNHRVQVFEPNGNF
LCKFGTHGSGFGQMDRPSGVAVTPDGVIVVVDFGNNRILKF
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttctccgactccgacctgcagacctgtcttctctgcaaggagctctgtggc
tcctcctccactcccatctcttgtaactcctccacttcctcttcctcctctcactcgtcc
tcctcctcctcccggcgcctccatgtcctcccctgcctgcacaccttctgcagacagtgt
ctggaggggcagcgcagtcatggggaccctctcaaactcagctgccccacctgcaaccag
aaggtctccgtctccgatgccgcagtggaccctctcccttcctccaacttcctcttgggt
aaccttctggacgcggagcagctccaactgggccaaaataagaacggtcaccggggggtc
ggtgggtgctccgtacccaggttccccctcgcccacagcgtgctccacccgaaccgtctg
ggagagccccagtgcagctcctgtggcgaggggaacccggccagcttccactgcctggac
tgccaggagtacctttgtgataactgcgtccgagcccatcagagggtccggttgaccaag
gaccacttcatggagagcctgcagcatgcaagccgaggcttggccagccccatcgcaggt
agaggcagaggtgtagggttgtccctgacccagcccttccagtccaactcctccctgctg
cctttgttccaggataggatgagcttctgtcagcaccatgacaacaaggtgtttctgttt
ttctgtgagacgtgctctgtgcctatctgtagggagtgtagtgtgggcagacacatgggc
cacagcttggtctatctacaggacgctgtccaggactccagagacatcatcatccagcta
ctggccgacgcacagcaaggaagacaggctgtacagttgagtatggagaagatccaggcc
atagcagagcaggtagacatcaaggccaaggtggtacagacagaggtgaagaacgtggtc
ctcagacacctgaaagccttggaggacagagagagtcagctactctggaaggttgagaag
atccagcagctgaaagccaagtccctgtacctgcaggtagagaagctgcatcagaacctg
accaagctggacagcaccatcacagcagtcactcaggtgctggatgagggttgtcacctg
gacgtgctgctggccagagagcgcatgctgacccagatccaggagttgaagtctctcaga
ggcctgctgcagccacaggaggacgatcgtttaatgttcacccctccagaccaggccctg
tacatcgccatccagtccatggggttgatcagtagcggagcgttcgctcctgtcaccaaa
gctcacggcgagggcctaaagaccgcactccgtggcaagaccgcctccttcaccgtaatt
ggctacgaccacgacagggagccctgcctctcgggcggtgacgcagtgtcagcggtggtg
atggcagcggcggatggtaacctgtcggctgcggaggtgtgtgacaaccagaacgggtcg
tacacggtcagctacttgcccaagactgagggagaagatttggtgtcagttctggtctgt
aaccagcacatcatgggcagccccttcaaggtactggtgaggtctgggcgacgctacggg
gctctgggttcaccggtgtctgcgtttggcagtgagggggagggtgacggtcagctgtgt
cgtccctggggcatcagtgtggataaagagggatacgtggtggtggccgaccgcagcaac
aaccgcgtacagatcttcaagccgtgcggtgccttccaccacaagttcggctccctgggc
tctcgccccggtcagtttgatcgtccagcgggtgtggcgtgcgatagccaacagcagatc
atcgtaacggacaaagataaccaccgtgtgcaggtgttcacctttgacggacagtttatg
ctgaagttcggagagaagggcactaagaacggtcagttcaactacccctgggatgtggca
gtgaactctgcggggaagatcttggtctctgacaccaggaaccaccgcgtccagctcttt
ggccccgatggctcgttcatcaacaagtacggctttgagggcaccctgtggaaacacttt
gactcgccgcgtggtgtcgcctttaaccatgaggaccacctggtcgtcaccgacttcaac
aaccaccgtctgctggtgattcggccagattgccaatctgcccggttcctgggctccgag
ggtaccggcaacgggaaattcctgcgtccccagggcatagcggtggaccaggagaaccgg
atcatcgttgccgactcgaggaaccaccgtgtgcaggtgttcgagcccaacgggaacttc
ttatgcaaatttggcacccatggcagtggcttcggacagatggaccgcccctccggtgtc
gctgtgacacctgacggagtcatcgtggtcgtcgacttcggaaacaaccgcatcctcaag
ttctaa
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