Oncorhynchus masou masou (cherry salmon): 135549589
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Entry
135549589 CDS
T10723
Name
(RefSeq) chromobox protein homolog 3-like isoform X1
KO
K11586
chromobox protein 3
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
135549589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omm03041
]
135549589
03036 Chromosome and associated proteins [BR:
omm03036
]
135549589
Spliceosome [BR:
omm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
135549589
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
135549589
Heterochromatin formation proteins
HP1 (heterochromatin protein 1)
135549589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chromo_shadow
Chromo
Chromo_SEND1
Motif
Other DBs
NCBI-GeneID:
135549589
NCBI-ProteinID:
XP_064835756
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All DBs
Position
12:16219793..16228739
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AA seq
189 aa
AA seq
DB search
MKTSSPLVSQPNMGKKQNGKGKKEVLEAEPPEEYVVEKVMDQRIVNGKVEFFLKWKGFTE
ADNTWEPEDNLDCPELISAFLEAQKNVVEKPDSNKRKSSTDEPETEENKAKKKKDVSDKP
RGFARSLDPERIIGATDSSGELMFLMKWKDSDEADLVPAREANTRCPQVVISFYEERLTW
HSCPEDEAQ
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacctcctcccctcttgtttcgcagcctaacatgggtaaaaagcagaatggcaaa
gggaagaaggaggtgctggaggcggagccgccagaggagtatgttgtggagaaggtgatg
gaccagcgcatcgtcaatgggaaggtggaatttttcctcaagtggaaaggatttacagaa
gcggataacacttgggagccagaggataacctggactgtcccgagctgatctcggccttc
ctggaagcccagaagaatgtggtagaaaagcctgactccaacaagaggaagtcctcaaca
gatgagccagagactgaggaaaacaaagccaagaagaagaaggatgtgagtgacaagcca
cggggctttgccaggagcctggacccagagaggatcatcggtgcaactgacagtagtgga
gaacttatgttcttgatgaagtggaaagactcggacgaggcagaccttgtcccggcccgg
gaggccaacactcgctgccctcaggtggtcatctccttctacgaggagaggctgacctgg
cactcctgtcctgaggatgaggcgcagtag
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