Oncorhynchus masou masou (cherry salmon): 135549618
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Entry
135549618 CDS
T10723
Name
(RefSeq) TBC1 domain family member 5-like
KO
K18469
TBC1 domain family member 5
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135549618
Membrane trafficking [BR:
omm04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
135549618
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF7615
Motif
Other DBs
NCBI-GeneID:
135549618
NCBI-ProteinID:
XP_064835813
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All DBs
Position
12:complement(17231936..17275056)
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AA seq
819 aa
AA seq
DB search
MQHPNFETHHPLQPEGEQEMGFDPLHNFNRNLSCGGSLDSSTLSESTFLSYRKEWDDLFL
NSNYLTRIRQAGINGRLRSSRFRSVCWKLYLEVLPEDKSQWINKTKELRSQYEKIKERHI
TNPRKAAGQQDLVVNNPLSQDEGSLWNKFFQDNELRGMIKQDVMRTFPEMRYFQEEDVRT
KLTDILFCYARENEQLLYKQGMHELLAPIVFVLHCDHQAFQHASETAHPSEEMMSLLNPM
FQEHDAYAMFSQLMETAEPWFSSFQREVRRGKEEMLTSMPFARPQDLGPSVAIVTKVNRI
QDQLVKKHDVELHMHVNRLEIAPQIYGIRWVRLLFGREFPLQDLLVVWDALFADSITLDL
VDYVFVAMLLYIRDALIASNFQTCLGLLMHYPPIGDIHTLLHKALFLRDPKNNPRPANYQ
FQQNLDYYMTRGADLVNSTRAKTAPLNINKVSSSLLSFGRKLIAPAISGGVASVISPINS
EIRSAPSPLTAAPRPQAEPLFSGHAPLQTHSQSQHQRLLKSESMPVYLSQGQTSRTVSSF
PSIESLSGGQGHTTASPPLPVSRGSDISTLSPPLSATKKDSFFNITRSHSKTMGKKEAEE
ELEAQVSFLQGQINDLEAMSKYCAKMMNTHIGRIQEVILQEHLEKEDEVLVSLAGLKQIK
DILKGSLRFNQSLLETEENEEITIADDHYDQASAAQQQHANSHHEDQPYLAAAQRGEGDG
GQEEEEREQTPPEQQASPPESSLCVGSEGRNWDDYILVSQDGELPPTGGGVERTPPIRQL
HGSVMVEPFQGTASGSSSPDEGSIHSKDSDFAMVNSQDL
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaccctaactttgagactcaccaccctctccagccagagggagagcaggagatg
ggttttgacccgctccacaacttcaacaggaatctcagctgtggaggatctctggatagt
agcactttgtctgagtccactttcctctcctataggaaagaatgggatgacttgtttctg
aacagtaattacctgaccaggatccgtcaggcaggcatcaacggtcgattgcggagcagt
cgattccgcagtgtgtgctggaagttgtacctggaggtccttcctgaggataagagccaa
tggatcaacaagaccaaggagttacgatcccagtacgagaagatcaaagagagacacatc
accaacccccgtaaggctgcaggccagcaggacttggtggtcaacaacccactctcacag
gacgaggggagcctgtggaacaagttcttccaggacaacgagttaagagggatgatcaaa
caggatgttatgagaacgtttcctgagatgcgttacttccaagaggaggacgtaaggaca
aagctgacagacatcttgttttgttatgcccgagagaatgaacagttactgtacaaacag
ggaatgcatgagttgttggctcctattgtgttcgtcctacactgtgaccatcaggccttt
cagcacgccagcgagaccgcccaccccagtgaggagatgatgtctctactgaatcctatg
ttccaggagcatgatgcctatgccatgttttcccagctgatggagacagcagaaccctgg
ttctccagcttccagagggaagtcagaaggggaaaggaggaaatgctaaccagcatgccg
ttcgcccggccgcaagacttggggccgtccgttgccatagtaaccaaagtgaaccgcatc
caggaccagctggtgaaaaagcacgatgtggagctgcacatgcacgtcaaccgcctggag
atcgccccacagatatacggcattcgctgggtgcgtctgctgtttggccgtgagttcccc
ctgcaggacctgttggtggtgtgggatgccctgtttgctgacagcatcactctagacctg
gtggactatgtcttcgtagccatgctgctctacatcagagatgccttgatagcgagtaac
ttccagacctgtctgggccttctaatgcactacccacctataggagacatccacacccta
ctacacaaggctttgttcctccgagaccccaagaacaatcctcggccggccaactaccag
ttccaacagaatctggactattacatgaccagaggggcagacctggtcaacagcacccgt
gccaagacggctcctctcaacatcaacaaagtctcgagcagcctgctcagctttgggagg
aagctcatcgccccagccatatcagggggtgttgccagcgttatctctccaatcaacagc
gagattcgttctgccccctcccccctcactgcagccccccgcccccaggccgagcccctg
ttctctggccacgcccccctgcagacacactcccagtcccagcaccagcgcctactgaag
tctgagagcatgccagtctacctgagccaaggccaaacctccaggacagttagctccttc
cccagcatagagagtctttctgggggacagggtcacaccacagcatccccgccccttcct
gtctccaggggaagtgacatcagcaccttgtccccacccctctcagccaccaagaaggac
tccttcttcaacatcactcgctcccacagcaagaccatgggcaagaaagaggctgaggag
gagttggaggcccaggtgtccttcctgcagggtcagatcaatgacctagaggccatgagc
aagtactgtgccaagatgatgaacacacacattggtaggatccaggaggtgatcctacag
gagcacctggagaaagaggatgaggtgttggtgtcactggctggacttaaacagatcaag
gacatcctgaagggatctctgcgtttcaaccagagcctgctggagactgaggagaacgag
gagatcaccatcgctgacgaccactacgaccaggcctctgccgcacagcagcagcacgcc
aacagtcaccatgaagaccagccttacctggccgcagcacagcgtggcgagggtgatgga
ggacaggaggaagaagagcgggagcaaaccccaccagagcaacaggcttctcccccagag
tcctctctgtgtgtgggctcggaggggaggaactgggatgactacattctggtctcgcag
gatggagagctgccgcccaccgggggaggggtggagaggacccctccaatcagacagctc
catggctcggtcatggtggagccgttccaggggacagcgtcgggttcctccagcccagac
gagggcagcattcacagcaaagactcagacttcgccatggtcaactcccaggacctgtga
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