Oncorhynchus masou masou (cherry salmon): 135549663
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Entry
135549663 CDS
T10723
Symbol
pex1
Name
(RefSeq) peroxisome biogenesis factor 1
KO
K13338
peroxin-1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
135549663 (pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135549663 (pex1)
Membrane trafficking [BR:
omm04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
135549663 (pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_14
AAA_22
nSTAND3
TIP49
NPHP3_N
RNA_helicase
ATP-synt_ab
AAA_5
AAA_28
AAA_18
AAA_33
ABC_tran
DUF815
RuvB_N
NACHT
IstB_IS21
ORC-CDC6-like
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
135549663
NCBI-ProteinID:
XP_064835913
LinkDB
All DBs
Position
12:19667960..19699323
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AA seq
1279 aa
AA seq
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MLGNHGIQPVTLIFHNTKNCFLHLPPNLLKQLSLQDNQALELSWGHDARVFLSWSRSRST
ANQEDHKVALSRQLGEKLGLRDGEQGFLRSCQQVLSVQQVFVEPLSSDDWEILELHSAEL
EQQLLDQIRVVFPDAVFPVWVDQRTVIYIRIASLTPTVPYGRLEQFTELHVSPKIRAGSE
DLSCAPFGSSLSNQNMPLQRQPNFDLSPSSRSSQEFSVQGTGLPVEQHPNAAALQSPRQW
GRIADVKSLVRYMLTGNCDPVRETPPIPTIPALLSDSVFRVCRAPPVSPGPLSATHGVAH
ILPWGQQMGGNINGGQPAVTYGLLSKVLSPKEVRERAKQAMEKKKSGVAGGAPQPGGVPQ
PGGAGGAGDREEKEDATVVKVVCHLTEGLKGKQGSSREGELHSGRIWIPQSLETRLHINP
HSSVRIKPIKSTPKVATSIHLQPLQPLPAAESEVEIQTAFLGWLHTQSHEPLACLTGRSN
TIFLPATDGKVEFALTVLKSEPEPESKAPDQLFLLAPCVIQKTDIQVVREPVTVPTMKAM
GETPNQDLPSLSSLGGVEELIRTGFDFLSHSLMGRPLSWELVSTGRGLRGGALLITGARG
SGKTALSRALCRKTMEDLDAHVEVVDCKKLKGKRAETVRQILEEVFEQAVWRQPSVVLLD
DLDHVTGAPTSPEHEHGPEALLRLHIAQSLRDMVHDMVVRSSLVSLVISSHSEHSLHPSL
REVQGSHFLQGFIHIQPPDQAQRGEILRCLILSKTAVSKETLHTLDLGIIAKETEGYLPR
DLALLLERAIHANALHRARSTQGVCLSWRDFVQALKGFTPPTLWGAQLQSPSGAGLERVG
GLHQVRQLLMDTILLPAKYPVLFSSLPIRQRSGLLLYGAPGTGKTLLAGAVAKESGMNFI
SIKGPELLSKYIGASEQAVRDVFQRAQAAKPCILFFDEFDSLAPRRGHDNTGVTDRVVNQ
LLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKSLYCPPPDQEARVEILRALSHS
VPLADDVDLEQMAGATDTFTGADLKALLYNAQLEAIHSSLGPSLLHDLGSGSDSDISLSS
MIFLNHSSGSDDSTGEGERGCGLDHSMVLLDLSDVPPEDPRGNIWRLYFGSSFESELGNT
SPSGLNSQGVSGPNSNDLTGASVRDPGFSHPPAYMSSLQDGYEELSHEQLDRLRLEISNI
KSNYRRATEDSVPVQSGPIRTGLLLCQAHLTSALNATRASLSKQDWRRYTDLYESFGASG
EGKSQSTVTFKPGQRVTLA
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgttgggcaatcatggcatccaacctgtcactctgattttccacaacacgaaaaactgt
tttcttcaccttcctccaaacttgttaaaacagctctctctccaagacaaccaggccctg
gagctttcctggggtcatgatgcccgtgtgtttctcagctggagcagaagcagaagcact
gccaaccaggaggaccataaagtagcgctgagcaggcaactgggagagaagcttggactc
agagatggagagcagggcttcttgaggtcgtgccagcaggtcctgtctgtacagcaggtg
tttgtggagccactctcctctgacgactgggaaatcctggagctccacagtgcagagctg
gagcagcagctcctggatcagattagagtggtgtttcctgatgcagtgtttcctgtgtgg
gtggaccagagaacagtcatctacatcagaatcgcttcactcaccccaactgtgccgtac
ggtcgattagagcagttcacagagctacacgtctctcctaaaatccgtgctggaagtgaa
gacctctcctgcgctccttttggatcatccttatccaatcagaacatgcccctccaaaga
cagccgaactttgacctctcaccctcctccaggtcctctcaggagttcagcgttcagggg
actggactccctgtagaacaacatcctaacgctgctgccctccagagcccccggcagtgg
ggcaggatagcagacgtaaagagcctggtcaggtacatgctaacagggaactgtgaccct
gtgagagaaactccacccatccccaccatccctgccctcctcagtgactcagttttcaga
gtgtgcagagcaccgcccgtgtctcctggccctctgagtgccacccatggggttgcccac
atcctgccctggggccagcagatgggaggtaatatcaatggaggccagccagctgtgacg
tatggcctactgtccaaggtgctctctcccaaggaggtgagagagagggctaagcaggcc
atggaaaagaagaagagtggcgtggctggtggtgctccccagccaggtggtgttccccag
ccaggtggtgctggtggggcaggagacagggaggaaaaagaggatgccactgtcgtcaag
gtggtgtgtcaccttacagaggggctgaaagggaagcagggatcatctagagagggagag
ctccacagtggaaggatctggatcccacaatccttggaaactcgtcttcatatcaaccca
cactcatcagtgagaattaagccaatcaagtcaactcctaaagtagccaccagtatccac
ctgcagcctttacaaccactgcctgcagcagagagtgaggtggagattcagactgccttc
ctgggttggctgcacacccagagccacgaaccactagcctgtctgaccggccgctccaac
accatcttcctacctgccactgacggcaaggtggagtttgctctgactgtgttgaagtca
gaacctgagccggagagtaaagcgcctgaccagttgtttctgttggctccatgtgtgata
cagaaaacagacatacaggttgtcagggaacctgtaactgtgcctaccatgaaagccatg
ggtgagacacctaatcaagatctaccctctctcagcagtcttggtggtgtggaggagctg
atcaggacggggtttgacttcctctcccacagcctgatgggacggcctctctcctgggag
ctggtgtccaccggccggggcctccggggcggagccctactcatcacaggggccagggga
agtgggaagacggcactctccagagctctgtgtaggaaaactatggaggacctggatgct
catgtggaggtggttgactgcaaaaagctgaaagggaagagagcagagaccgtgaggcag
atattggaagaggtttttgaacaggcggtgtggagacagccctctgtggtcctgctggat
gacctggatcatgtgacgggggcaccgacctcaccggaacatgaacacggaccagaggct
ctgctaaggctgcacattgcccagagtctaagggacatggtacatgacatggtggtgcgc
tccagcctggtgtctctggtcatcagcagtcacagtgaacattccctccacccgtcactc
agggaggtgcagggctcccacttcctccagggcttcatacacatccagcctcctgatcag
gcccagagaggagagatcctgcgctgtctgatcctcagtaagactgctgtatccaaggag
accctacacacgctcgacctggggattattgccaaggaaacagagggctacctgccccgt
gatctggccctgctgctagagagggccatccatgccaacgccctacacagggcacgcagc
acccagggagtgtgtctgtcgtggagggattttgtgcaggctctgaagggcttcacccct
cccactctgtggggggctcagctgcagagccccagtggtgcaggccttgagagggtaggg
ggactgcatcaagtacgccagttactcatggacaccatcctgctaccggccaagtatccg
gtgctcttctccagccttcccatccggcagcgctcaggacttctgctgtacggcgctcca
ggcactgggaaaaccctgctggctggtgccgtggccaaggagagtgggatgaacttcatc
agtatcaagggtcccgaactcctcagcaagtacattggagccagtgagcaggctgtcaga
gacgtcttccagagagcccaggctgctaagccctgcatcctgttctttgatgagtttgac
tccttggcacccaggaggggtcacgacaacaccggggtcactgatcgggtggtcaaccag
ctactgacccagctggatggggtggagggactacagggtgtgtatgtcctggctgccact
agtcgtccagacttgatagaccctgccctgctgaggcctggccgcctggacaagtctctc
tactgtccccctcctgaccaggaggcgcgtgtagagatcctgagggctctgagccactcg
gttcccctggctgacgatgtggacctggagcagatggccggggccacagacacgttcact
ggcgctgacctgaaggccctgctgtacaatgcccagcttgaggccatccacagcagcctg
gggcccagcctgctgcatgacctggggtcgggttcggacagcgacataagcctgtcctcc
atgatctttctgaaccacagcagtgggtctgatgactcaactggggaaggggagagaggg
tgcgggctggaccactccatggtgctgctggacctcagcgacgtcccccctgaggacccc
cgtggtaacatctggaggctgtacttcggcagctcctttgagtccgagctgggcaacact
tccccctcaggactgaactcccagggtgtctcggggcccaactctaatgacctgaccggt
gcgtcggtcagagaccctggcttctcccaccccccggcctatatgtcctctctacaggat
ggctacgaggagctcagccatgagcagctagaccgcctccgtctggaaatcagcaacatc
aagagcaactacagacgagctactgaggacagtgtcccggtccagagtggccccatcagg
acaggtctactcctgtgtcaggcccacctcacctcagccctgaatgccaccagagcctcc
ctcagcaagcaggactggaggaggtacactgacctgtatgagtcctttggagcttcggga
gaaggaaagtctcagagcacagtgacgttcaaacccggccaaagagtaacgctcgcctaa
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