Oncorhynchus masou masou (cherry salmon): 135549787
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Entry
135549787 CDS
T10723
Name
(RefSeq) retinoic acid receptor alpha-A-like
KO
K08528
retinoic acid receptor beta
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135549787
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
omm03310
]
135549787
Transcription factors [BR:
omm03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
135549787
Nuclear receptors [BR:
omm03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
135549787
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
135549787
NCBI-ProteinID:
XP_064836155
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Position
12:complement(27219075..27352774)
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AA seq
466 aa
AA seq
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MFDCMDLLAVSPGQMLDFYTSSPSSCMLQEKALKACFGGLAQRDWQHRRSAHSIETQSTS
SEELVPSPPSPLAPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRD
KNCIINKVTRNRCQYCRLQKCFGVGMSKESVRNDRNKKKKESPKPELTENYELSAEQEAI
IEKIRKAHQETFPSLCQLGKYTTKSSAEQRVRLDLGLWDKFSELATKCIIKIVEFAKRVP
GFTGLTIADQITLLKAACLDILILRICTRYTPDQDTMTFSDGLTLNRTQMHNAGFGPLTD
LVFTFAHQLLPMEMDDTETGLLSAICLISGDRQDLEEPSKVDQLQEPLLEALKIYVRKRR
PSKPHMFPKTLMKITDLRSISAKGAERVISLKMEIPGSMPPLIQEMLENSEGQDGQSSTE
GEDGSSPKKGIPKGGKPCPVSPDPDPDASDSDGPTAAPKEEEEEDP
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattgtatggatttgctagcggtgagcccgggacaaatgttggatttctacact
tcgagtccctcttcgtgcatgctacaagagaaggcactgaaagcgtgcttcggcgggctc
gctcagagagactggcaacaccgccggagcgcacattccatcgagacccagagcaccagt
tctgaggagctggtcccaagtcccccgtcccccctggccccgccccgcgtctacaagccc
tgcttcgtgtgccaggacaagtcctcggggtaccactatggtgtcagcgcctgcgagggc
tgcaagggttttttccgtagatccatccagaagaacatggtgtacacgtgtcaccgggac
aagaactgcatcatcaacaaggtgaccaggaaccgctgtcagtactgccggctccagaag
tgctttggtgtgggcatgtccaaagagtctgtccggaacgaccgcaataagaagaagaag
gagagtcccaaaccagagctgacagagaactatgagctgagtgcagaacaagaggccatc
atagagaagatacgcaaggctcatcaggaaaccttcccatcgctctgccagctggggaaa
tacaccacgaagtcgagtgcggaacaacgcgtgaggctggacctggggctgtgggataag
ttcagtgagctggctactaagtgcattataaagatcgtggagtttgccaaacgagtgcct
ggcttcacaggactcaccatagctgaccagatcacgctgcttaaagctgcctgccttgac
atactgattctacgtatctgtacgaggtacactccggaccaggacaccatgacgttctca
gacggactgaccctgaaccggacccagatgcacaacgcaggcttcggcccgctcaccgac
ctggtgttcaccttcgcccaccagctgctgcccatggagatggacgacacagagacaggc
ctgctcagcgccatctgcctcatctctggagaccggcaggacctggaggagccctctaag
gtagaccagctccaggagcctctactggaagctctgaagatctacgtgaggaagaggagg
cccagcaagccacacatgttccccaagaccctgatgaagatcactgacctccgcagcatc
agcgccaaaggtgcggagcgggtcatctcgctgaagatggagatccctgggtccatgcct
cctctgatccaggagatgctggagaactcagagggccaagacggccagagcagcaccgag
ggcgaggacggaagcagccccaagaagggaatcccgaaggggggtaaaccctgccctgtg
tcccctgaccctgacccagatgcttcagacagcgacgggcccacagcggcccccaaggag
gaggaggaagaggacccctag
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