Oncorhynchus masou masou (cherry salmon): 135549818
Help
Entry
135549818 CDS
T10723
Symbol
arid1ab
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135549818 (arid1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135549818 (arid1ab)
03021 Transcription machinery [BR:
omm03021
]
135549818 (arid1ab)
03036 Chromosome and associated proteins [BR:
omm03036
]
135549818 (arid1ab)
Transcription factors [BR:
omm03000
]
Eukaryotic type
Helix-turn-helix
ARID
135549818 (arid1ab)
Transcription machinery [BR:
omm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135549818 (arid1ab)
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135549818 (arid1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
135549818
NCBI-ProteinID:
XP_064836216
LinkDB
All DBs
Position
12:complement(29415067..29468238)
Genome browser
AA seq
2309 aa
AA seq
DB search
MAAQVASVATLNTSPPSELKKPDREPLEESVPGEKQHVNKEPGSDNGSPGQKDLQDGADA
GNVGGGGEPDMKNGNSSRVNNNNNQNDTGGPEGNNHSGMGHHHQGSFPPPPYGYNQHYSR
GPFHQHGGQQSPGMAAAAGPAVQPGNMMDPYPPNSHEHGFPNHFNNYSPFPNRTSYQGQG
YAMNSPRNNQPPAAGGQPGKQQPAGGTTAMAASYNNQRYNIGNLQPTSTPTLNQLLTSPS
STRTYQNYPQGDYSNQEGASKGAADMASSQYGGGHPGWQQRTHHPPPMSPGNTGPGNTGP
LNRNQPPSPMDQAGKMRGQGYGGVNPYSQQQGQGQGPPPPGAQQGASYPGQGYGPPGSQR
YPMGMQGRTPGGMGGMQYGQQMASYGQQGPGGYGQQSQGYYGQHGPPPHAGQQQSPYPQQ
VHTSQGQPSAQHSQPGAPGPYPQGQGPPQVGPPQIQPPYNQGPQGQAVPQGQGPQPSYTQ
QQGPQGQQPPQQQLPSQQQGPPQQQERVAPPQAQPPPGHQQPPGHQPSPGHQPPPSHGGQ
QPPTGHQPSPGPQGHHPSPGHGGPPQQQGQSQQGQPSPYSQTPPLQQSPFQRFPPPPQEL
SQDSFSSQSSAPPSNQPMTSTKSGAEDSMQGRPSSLPDLSGSIDDLPTGTEGALSPGVST
SGVSSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVTPSRSGPLSPAAVPGNQ
MPARPPSVHSDSIHSSMNQSAMGQDRVYMRNPQMPPYGSPQQPGSALSPRQSSGGQMHPG
MGPYPQNNSMGNYGPQGGQYGPQGYPRQPGYSGMPNANYPGGPGGMNPMPGQAGGAPYAG
MPPGRMGPGQMGARPYGPGMGPNMGPGMPPQVTSGMCPPPGMNRKGPGGPPDAASAMHHG
GPGANSIHNRPPGYPPNMPQGMMGAGSPYGPGPGAINSMQGMLNQGGPYGGGPMGGNMAN
NTPGIVPSPEFGIDVKLNPAQKMNNKVDGTPKPETKKVKKKSNSSTTTNEKITRLYELGP
EPERRTWVDRYLAFTEEKATGMTNLPAVGRKPLDLFRLYVSVKEIGGLTQVNKNKKWREL
STNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDLFIDAKKTTQPKIQPPSPAG
SGSLQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPMPGVRLQDPFADGGDPAFARRN
SMTPNSYQPGMGGPEMMGRMGPYEPNKDPFGGMRKAGEQFMTPALGPNSGVEGQFNRGPP
GPMVPNMQMGQRQQYPYVPGYDRRQEPGMGPDGSMGPGAPQPNLMPSGADSGMYSPSRPP
PVQRHDSYGNQYPGQGAPPGGPYPNQQPGMFPQQQPNYKRSPGDGAYGPPAKRHEGDGMY
NVPFSGQQQPGPQPPGAPQGQQDMYNQYNTGYPDRRPPGPQGQFPFPFGRDRAPSSGGPN
SQSPMPPQMMGSPMQAAPDGPQCPMWQGRNEMGYPNYPNRQGPPGPGQGPPQGYHGMNRS
EEMMPGADQRINHEGQWPGHPNQRQPPYGPGGSGPPMSRPLQSNYQSSQNHISQVSSPAP
MPRPMESRTSPSKSPYMHSGIKMQKAGPPVPASHIGQAPVQPPLIRRDISFPPGSVEASQ
PILKPRGRLTMKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSISTFNLCQLP
GFLELVVEYFRRCLIQIFGILKEYEVGDPGQRMLIDPHTADEDCSDEELPEQEDMEEDEE
EEEDDEEEEEEEERTSNTDTTTSSQQVQVKQEGVGKEEKSTTEKLTAEEEREGGESSSSS
PAPQDSSLSQEKPKQASKFDKLPIKMVRKKDPFPGCRSSKQGRRQSFDSGLIHWSIGGGD
TTEHIQTHFESRSELLKQRKRVLPSVTESRKKVAVTVSEHPEKTKSGKEQTTSPAEKTTK
TSAPTTPAPVTATIDDVLSARPGSVTEEAVRGAAEEQKESGGQFLFSIRKAQQSRRNITI
LEDEPHSKDETPLSTLSDWQDALARRCICVSNIVRSLSFIPGNDLEMSKHPGLLLLLGRL
VLLHHRHPERKQAPVTYEKEEDEGVSCERDEWWWDCLEVLRENCLVTLANISGQLDLSIY
PESICLPLLDGLLHWAVCPSAEALDPFPMLGPHGALSPQRLVLETLSKLSIQDNNVDLIL
ATPPFSRLEKLYGTLVRLVGERKVAVCREMSVVLLANLAQGDSMAARAIAVQKASVGNLL
GFLEDSLAATQYQQSQSSLMHLQGAHFEPTSVDMMRRAARALHAMAKVEENHSEFTLYES
RLLDISVSPLMNSLVSHVICDVLFLIGQS
NT seq
6930 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgctagcgtcgccactctcaacactagcccgccatccgaacttaaa
aagccggatcgggaaccactggaggagtcggtaccgggagagaaacaacatgtaaataag
gaaccgggatctgacaacggatctcctggacagaaggatctgcaggacggggccgatgct
ggaaatgtagggggaggaggggagcctgacatgaagaacgggaactcgtccagggtgaat
aataataacaaccagaatgatactgggggaccggaggggaataaccactccgggatgggc
catcaccaccagggctcattccctccacctccttacggttacaaccagcactacagccgg
ggcccttttcatcaacatggcggacaacaaagccctggcatggcagctgcagcggggccg
gcagtgcagccaggtaacatgatggacccatacccgcccaactcacacgagcacggcttc
cccaaccattttaacaactacagccccttcccgaaccggacttcttatcagggccaagga
tacgccatgaattccccgcgtaataaccagcccccggcggctggggggcagccaggcaag
caacagccagcaggcggaactacagctatggctgcctcgtacaataatcagaggtataac
ataggaaacctacaacccacgtctaccccgactttaaatcagcttctaacgtctcccagc
tcaacgaggacctaccagaattacccacaaggagactatagtaaccaggaaggggctagc
aagggagcagcagatatggccagcagtcagtatggtgggggccatccgggttggcaacaa
aggacccaccatccgcctccaatgagcccagggaacacgggacctgggaacacgggacct
ctgaacagaaaccagccccccagccctatggaccaggcagggaagatgagaggccagggg
tatggtggagtcaacccctactctcagcagcaaggccaggggcagggccctcctcctcca
ggggctcaacagggtgcctcctacccaggccagggctacggacccccagggtctcagaga
taccccatgggcatgcagggacgcacccctggcggcatgggtggcatgcaatacggacag
cagatggccagttatgggcagcagggtccagggggctacggtcagcagagccagggctac
tacggccagcatggccccccaccacacgctggtcagcagcagtccccctacccccagcag
gtccacacctcccagggtcagccctcagcccaacacagccagcctggggcccccggcccc
tatccccagggccaaggccctccgcaggtgggtccacctcagatccagccaccctacaac
cagggaccgcagggccaggccgtgcctcagggtcagggcccccagcccagctacactcag
cagcaaggaccccaagggcagcagcctccacagcagcagctcccctcgcagcagcaagga
cccccccagcagcaagaaagggtggcccctccacaggcccagccacccccgggccatcaa
caacccccaggccaccagccctctccaggccaccagccaccccctagccatggtgggcag
cagccacccacaggccatcagccctccccaggcccccagggccaccacccctctccaggt
cacggtggacccccccagcagcagggtcagtctcagcagggccagccctcaccctactcc
cagaccccacccctgcagcagtcacccttccagcggtttccacctccaccgcaggagctc
tcccaggactcgttcagctcccagtccagtgctcccccctccaaccagcccatgacttcc
acaaagagtggagcagaggacagcatgcagggacggccttctagcttaccggacctctct
ggttctatagatgacctgccgactggtacggagggggctctgagtccgggcgtcagcacg
tcgggcgtgtccagtagccagggggaacagagtaaccccgcccagtcacccttctcacct
cacacctcgccccacttgcctggcatccgcgggccctccccctcccccgtgggctcccct
gccagcgtcaccccctcccgctctggacccctctcgcctgctgccgtgccaggtaaccag
atgcctgcccggccacccagcgtccattcagacagcatccactcatccatgaaccagtca
gccatgggccaggacagggtgtacatgcgaaacccccagatgcctccgtacgggtcgccg
cagcaacctggctccgccttatccccccgccagtcgtcgggaggccagatgcatcctggg
atggggccctaccctcagaacaactccatggggaattacggccctcagggtggacagtac
ggaccacaaggctaccccagacagcctggctacagtggcatgcccaacgccaactatcct
ggaggtccaggaggcatgaaccctatgccaggccaggctggtggggcgccgtacgcaggc
atgccccccggcaggatgggaccaggtcagatgggtgctcgcccctacggccctgggatg
ggccccaatatgggccctggcatgcccccacaggtgacctctgggatgtgtccccctcca
ggcatgaacaggaagggccccgggggccctccggatgcagcctccgccatgcaccacggt
ggccccggagctaactctatccataacaggcctccaggctacccccccaacatgccccag
gggatgatgggagcagggtctccgtacggcccggggccaggggccatcaacagcatgcag
ggcatgttgaaccagggaggaccctatggaggagggcctatgggagggaacatggccaac
aacacacctggcattgttcctagccctgagtttggcatcgatgtcaaactgaacccagcc
cagaagatgaacaacaaggtggacggcacgcccaaacctgaaaccaagaaggtaaagaag
aagtcaaactcttcgacgacgaccaatgagaagataactcgtctgtatgagctgggtccg
gagccggagaggaggacgtgggtagaccgttacctggcgttcactgaggagaaggccacg
ggcatgaccaaccttcccgccgtgggacgcaaacctctggacctcttcagactttacgtc
tcggtcaaagagatcggaggcctcacacaggtgaacaagaataagaagtggagggagttg
tccaccaacctgaacgtgggcacgtccagcagcgccgccagctctctgaagaagcagtac
attcagtgtctgtacgccttcgagtgcaagatcgaacgtggcgaggacccgcccccggat
ctcttcatcgacgccaaaaagaccacccagcccaagatccagccccccagcccagctggg
tctggatctctgcagggcccccagaccccccagtccaccagtagttccatggcggagggg
ggggacctaaagccccccaccccagcctccacccctcacagccagataccccccatgcca
ggagtcaggctgcaggacccgtttgcagatgggggcgacccggcgtttgccagacggaac
tctatgacccctaacagctaccagcctgggatgggtggtccggagatgatggggcgcatg
gggccctatgaacccaacaaggacccctttggtggcatgaggaaagctggagagcaattc
atgactccagcgttgggcccgaacagtggtgtggaggggcagttcaacagaggcccccca
gggcccatggtccccaacatgcagatgggtcagagacaacagtacccctatgtacctgga
tatgacaggagacaggaaccagggatgggtcctgacggcagtatgggtcctggagccccc
cagcccaacctaatgccttcaggggccgattcggggatgtactcccccagccgaccccca
ccggtgcaacggcatgattcctatggtaatcagtatcctggccaaggagcgccacctggt
ggcccctaccccaatcagcagccaggaatgtttccacagcaacaaccgaactataagcgg
tctccaggcgacggggcctacggtcccccagcgaagcgtcacgagggggatgggatgtac
aatgtccccttcagcggtcagcagcagccagggccccagccccctggggccccccagggc
caacaggacatgtacaatcagtacaacacaggttaccccgaccgccgaccacctggcccc
cagggccagttccccttccccttcggccgagaccgggcgccctctagcggaggcccaaac
tcccagtcccccatgcctccccaaatgatgggcagcccaatgcaggcggcccctgatggc
cctcagtgccccatgtggcagggacgcaacgagatgggctaccccaactaccccaaccgc
caggggcctccgggacctggccaggggcccccccaggggtaccacggcatgaaccggtct
gaggagatgatgccaggggcagaccagcggattaaccacgagggccagtggccgggacac
cccaaccagagacaacccccctacggaccggggggctcgggtccccccatgtccagacct
ctgcagtccaactatcagagctcccagaaccacatatcccaggtgtccagtcctgccccc
atgccccgccccatggagagccggacgtccccctccaagtcgccctacatgcactccggc
atcaagatgcagaaggcggggccccccgtgcctgcttcccacataggccaggcccctgtg
cagccccctctcatcaggcgggacatatccttccccccagggtcagtggaggcctcccaa
cccatcctcaaacccagaggaagactcaccatgaaagacatcggcaccccagaggcctgg
agagtgatgatgtcactgaagtcaggcttactagctgagagcacttgggccttggacacc
attaatattctactgtatgatgacaacagcatttctactttcaacctctgccagctgcct
gggttcctggagctggtagtggagtatttcagacgctgcctcatccagatctttggcatc
ctgaaggagtatgaggtgggagaccctggccagaggatgctcatcgacccgcatactgcc
gacgaagactgctctgatgaagagctacctgagcaggaggacatggaggaggacgaggaa
gaagaagaggatgacgaagaggaggaggaggaggaggagaggacaagcaacaccgacacc
accacctcgtcgcagcaggtccaggtgaaacaggagggggtggggaaagaggagaaatcc
acaacggagaagttgacagcagaggaggaaagggaaggaggagagtcttcttcctcctcc
ccagcccctcaggactctagcctctcccaggagaaacccaaacaggccagtaagttcgac
aagctgcccatcaagatggtgcgtaagaaagaccccttccctggttgccgttccagtaaa
caaggccggcggcagagctttgacagcggactgatccactggagtatcggcgggggggac
accacggaacacatccagacccacttcgagagccggtccgaactcctcaagcagcggaaa
cgggtgctgccgtcagtcaccgagagcaggaagaaggttgccgtgactgtgtcggaacac
cctgagaagaccaagtctggcaaggagcagaccacctcccctgcagagaagaccaccaag
acctccgccccaaccacacctgccccggtcaccgccaccattgacgacgtgctgtcggcc
cggccgggctcggtgacggaggaggcggtgcgaggagcagccgaggagcagaaggagagc
gggggacagttcctgttctccatccgcaaggcgcagcagagccgacgcaacatcaccatc
ctggaggacgagcctcacagcaaggacgagaccccactgagcacgctgtcggactggcag
gacgccctggctcgccgctgcatctgcgtctccaacattgttcgatcgctctccttcatc
cccggcaacgacctggagatgtccaaacacccagggctgctgctgctgctgggccgtctg
gtcctgctccaccaccgtcacccagagaggaaacaggcccccgtcacctacgagaaggag
gaggacgagggggtgagctgtgagagagacgaatggtggtgggactgtctggaggtcctc
agggagaactgcctggtcactctggctaacatctccggccagctggacctgtccatctac
ccagagagcatctgtctgcccctgctggatggcctgctccactgggctgtttgtccctca
gccgaggccttggaccccttccccatgctggggccccatggggccctatccccccagaga
ctggtgctggagaccctcagcaagctgagcatccaggacaacaacgtggaccttatcctg
gccacgcctccattcagccggctggagaagctgtacgggacgctggtgcgtctggtcggg
gagaggaaggtggctgtctgcagggagatgtctgtggtcttactggccaacctggcccag
ggagacagcatggcggccagggccatcgccgtgcagaaggccagcgtaggtaacctcctg
ggcttcctggaggacagtctagcagccacgcagtaccagcagagccagagttccctgatg
cacctacagggggctcactttgagcccaccagtgtggacatgatgcggcgagcggcccgc
gccctgcacgccatggctaaggtggaggagaaccactcagagttcaccctgtacgagtcc
cgcctactggacatctctgtctcaccactcatgaactctctggtgtcccatgtgatctgt
gacgtactctttctgattggccagtcatga
DBGET
integrated database retrieval system
