Oncorhynchus masou masou (cherry salmon): 135549913
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Entry
135549913 CDS
T10723
Name
(RefSeq) vacuolar protein sorting-associated protein 45-like
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135549913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omm04131
]
135549913
Membrane trafficking [BR:
omm04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
135549913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
135549913
NCBI-ProteinID:
XP_064836370
LinkDB
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Position
12:complement(34756289..34778525)
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AA seq
569 aa
AA seq
DB search
MNVTLAVKQYISKMIENSGPGMKVLLMDKETTSIVSVVYTQSEILQKEVYLFERIDSQNR
DNMKHLKAICFLRPTKENVENLIQELRRPKYSVYFIYFSNVISKSEIKALAEADEQEVVA
EVQEFYGDFIAVNPHLFSLNLSGVARGRSWEPTLLPRTTQGLTSVLLALKKCPMIRYQLS
SDMAKRLGESVKQIITKEYELFDFRKTEVPPLLLILDRSDDAITPLLNQWTYQAMVHELL
GLNNNRIDLSRVPGISKDLKEVVLSAENDEFYANNLYLNFGEIGTNIKNLMEDFQKKKPK
EQQKLESISDMKAFVDNYPQFKKMSGTVSKHVTVVGELSRLVSERHLMEVSELEQELACQ
NDHSSASQNVRRLLQNPRVSEMDAVRLVMLYALRYERHSSSILPGLMEELNRKGVSEKHC
RMVTSMVEYGGKRVRGSDLVNPQDAVAITKQFFKGLKGVENVYTQHAPLLQETLDQLIKG
RLKDSHFPYLGPSSLRDRPQDIIVFVIGGATYEEALAIYNLNRTVPGVRIVLGGTTIHNT
KSFLEEVTLTAGAGQSERLQRAGRHPNRR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgacacttgctgtcaagcagtatatctccaaaatgatagaaaacagcggacca
gggatgaaggttctgctcatggataaagagacgaccagcatcgtcagtgtggtctacact
caatctgagatactacagaaggaggtctacctattcgaaagaatcgactcacagaatcga
gacaacatgaagcacctcaaagccatctgcttcctcaggccaaccaaggagaatgtggaa
aatctgatacaggagctccggcgacccaagtacagtgtctacttcatctacttcagcaac
gtcatcagtaagagtgaaataaaagccctggccgaggcggatgaacaggaggtggtcgca
gaagtgcaggagttctatggagacttcattgctgtgaacccacaccttttctccctcaac
ctcagtggtgtggcaaggggtcgtagctgggagccaactctcctgccacgtaccacccag
ggtctgacctcggtgctgctggccctgaaaaaatgtcccatgatccgctaccagctgtcc
tcagacatggccaagcgactgggagagagcgtgaagcaaataatcaccaaggagtatgag
ctgtttgacttcaggaagacagaggtgcctcctctcctgctcatcttggaccgcagcgat
gacgccatcaccccactactcaaccagtggacgtaccaggccatggtgcacgagctgctt
ggcctcaacaacaaccgcattgacctgtccagagtcccagggatcagcaaggacctgaag
gaggtggtgctgtctgcagagaacgatgagttctatgccaataatctgtacctgaacttt
ggagagattggcacaaacatcaagaacctgatggaggactttcagaagaagaagcccaag
gagcaacagaagctggagtccatctctgatatgaaggcgtttgtagacaactacccccag
ttcaaaaagatgtcgggcacagtgtcgaagcacgtgactgtggtgggcgagctgtctcgc
ctggtgagcgagaggcacctgatggaggtgtcagagctggagcaggagctggcctgccag
aatgaccactcaagcgcatcacagaacgtgcgtcggctgctgcagaacccgcgggtgagc
gagatggacgcggttcgcctggtgatgctgtacgcactgcgctacgagagacacagtagc
agcatcctgccgggcctcatggaggagctcaacaggaagggcgtgtcagagaagcattgc
aggatggtaacgtccatggtggagtatggagggaagagggtgagaggaagtgacctcgtc
aacccccaagatgcagtcgccatcaccaaacagttcttcaaggggctgaaaggagttgag
aatgtgtacacgcagcatgcaccgttactgcaggagaccttggaccagctgattaagggg
cggctgaaggacagtcatttcccctacttaggacccagctcccttagagacaggccacag
gatatcatagtctttgtcatcggaggggccacctatgaggaggcactggcgatctataac
ctgaaccgcaccgtgcctggggttcggatcgtactgggcggcaccaccatccacaacacc
aagagcttcctggaggaggtgacattgacggcaggcgctggccagtccgagaggctgcag
agggcgggtcgtcatccaaacagacgctga
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