Oncorhynchus masou masou (cherry salmon): 135549942
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Entry
135549942 CDS
T10723
Name
(RefSeq) collagen alpha-1(XIV) chain-like isoform X1
KO
K08133
collagen type XIV alpha
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
omm00535
]
135549942
Proteoglycans [BR:
omm00535
]
Extracellular matrix (ECM) proteoglycans
Others
135549942
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
VWA_3
DUF4992
Motif
Other DBs
NCBI-GeneID:
135549942
NCBI-ProteinID:
XP_064836414
LinkDB
All DBs
Position
12:35727232..35824230
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AA seq
1937 aa
AA seq
DB search
MQAIGLKMWVWSPLLCLVLISLLPVQAQSQVATPRRLRFKVLSATQLHVSWKEPKGEFES
YRFIYSTQSDAEETELEMTKKEAKVIIDFDPRKLYTVKVTAVKGAQESKPLQGTFKKPDN
ENVQPQNVRPKNQKDTSVTEENNEISEEQFMCKTPAIADIVILVDGSWSIGRINFRLVRM
FLENLVSAFHVEFDKTRIGLAQYSGDPRMEWHLNTFTTKEAVIDAVKNLPYKGGNTLTGL
ALTYILENSYKPESGSRAGVPKIGILITDGKSQDDVRPPAQSLREAGIELFAIGVKNADE
KELKAIGSPPEETHVYNVADFSVMSSIVERLTRTVCDRVEQLDKAIKGDRGPEVTMAPPR
GLVTSEVTARSFRVSWTHAPGTVEKYRVVYYPASGGQPEEKVVQGTVDTVVLNYLLSLTE
YQVAVFAIYASSASEALRGSATTLALPTVNNLELFDITHNTMRARWRVAEGASGFMILYA
PLTEGDDADEKEVKVAETVNEVELENLTPDTEYTVTVYAMYGEEASDPMTSQETTLPLTP
ARNLRFSNVDHSSARLTWEATSKKASGYRIMYVKTNGVQTNEMDVGHITTLLLRNLTSLT
EYTVAIFAIYDEGQAEPLTDSFTTKTVPEPLNLRSSEVSTESFRVTWEHSAQDVVLYRLT
WTPIRGGDTKEMLVNGKMNSHLLTGLRPITEYEVSLIAVFRNEEESNALTLTESTVARTT
TTTKATTTTTTTQATTTAVVRLGVRNLLLSDHTTFSMEVSWELQDRNVRQYRVTYVTARG
DRAEETKMVPGGQNSLLLQPLLSDMEYKVTITPVYANGDGPGVSRMGRTLPLSAPRNLRV
SEEWYNRFRITWDTPPSPTMGYRVVYKPISAPGPALETFVGEDVNTMLILNLMSGTEYGV
RVIASYTTGSSETLTGKARTLYLGVTNLNTYQVRMTSVCAQWGAHRHATLYRVVIESLLN
GYKQEARLGGGTTRHCFNDLTANTQYKISVYAQLQDTEGPAVSTTEKTFPVPTPAPTRPP
TTTAPPSIPSVKEVCKAAKADLAFLVDGSWSIGDDNFLKIIRFLYSTTGALDIIGPDGTQ
VSIVQFSDDARTEFKLNSYDNKERLLEAINRISYKGGNTKTGLAIRHVKDTIFTVGGGVR
RGIPKVLVVLTDGRSQDDVNKVSKEMQMEGYIVFAIGFADADYGELVSIASKPSERHVFF
VDDLDAFKKIEEKLVTFVCEAATATCPSVAMSGSTLPGFRMMEMFGLVEGLYGHVSGVSM
EPGTFNSFPCFRLHNNSLLAQPTKFIHPEGLPSDYTITMLFRLLPETPKEPFALWEILNK
DNEPLVGVILDNGGKTLTFFNHDYKGQFQTVTFEGPEIKKLFYGSFHKLHMAISKTSAKA
VIDCKLVGEKAINAAGNITTDGLEVLGRMVRSRGKKDSSAPFQLQSFDIVCSTSWASRDK
CCELPGLRKEEDCPAMPRACTCSQESKGPPGPTGPPGGPGIRGGRGDRGEPGAVGPIGPV
GDAGSPGLQGPPGPQGPSGRTIMGPPGGPGERGEKGAAGAPGIQGIPGSPGSSGRVGQTG
TRGLPGKDGPQGRTGPPGTIGTPGAPGSPGSSGPPGSLGNQGPPGPAGNKGEKGERGDLQ
SQASVQAIARQVCEQLIQSHMARYSSILNHIPSAPVSVRTVPGPPGEPGRQGGPGPQGEQ
GPPGRPGFPGSNGENGQAGARGLSGEKGDKGSPGAGVQGPRGPVGPPGPTGQGRTGSQGP
SGRPGNPGTPGRPGIPGPVGSAGPPGYCDQNSCVGYNVGEGGIGGDTSDRHNLPLVQLPP
NTYQNYDEVEEEDPYRYGEGGYPSEYYQPNYPAPRPVVPEDPSITQGDEVLRSPGIHRSH
RSLADKNDKKEEEGPGPGRGRWLSHEGEQAKESLAEVGDTRQELGLFSWRGKYPKGGLRT
IIKCLMSMSNGHIGGEG
NT seq
5814 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctataggactgaagatgtgggtatggagtcctctactctgtctggttcttatc
tctctcttacctgtgcaagctcagagtcaagttgccaccccacgaagacttcgtttcaaa
gtcctgagcgcaacccagctgcatgtgtcatggaaagaaccgaaaggagaatttgaaagc
tacagatttatttatagcacacagtcagatgcagaggagactgaactagagatgacaaaa
aaggaagccaaagtgatcatagactttgaccccagaaagttgtacacagtcaaggtcact
gctgtgaaaggtgctcaggagagcaagccacttcaaggaacatttaagaagcctgacaat
gagaatgtacagccccagaatgtacgacccaaaaaccagaaagacaccagtgtcactgag
gagaacaatgagatatctgaagagcagttcatgtgtaagaccccggccattgcagatatt
gtgatcctggtggacggatcatggagtatcggacggataaacttccgtctggtccgcatg
ttcctggagaatctggttagcgcattccatgtggagtttgacaagacacggataggtctg
gcccagtacagtggtgaccccaggatggagtggcacctgaacactttcaccaccaaagaa
gcagtcatcgatgctgtgaagaacctgccctacaaaggagggaacacattgacgggtctt
gcattgacgtacatcctggagaacagttataaacctgagtccggatccagggccggcgtt
cccaaaattggaatcctgatcacagatgggaagtctcaagacgatgtcagacccccggct
cagagtctgagagaggcgggaatagagctgtttgccattggtgtgaagaacgccgatgag
aaagagctgaaggccatcggctcgcctccagaggagacgcatgtctacaacgtggccgac
ttcagcgtcatgagctctatcgtggagcgtctgaccaggaccgtctgtgaccgggtcgaa
cagctcgacaaggccatcaaaggtgacagaggcccagaagtcaccatggcccctcccaga
ggcctggtgacctcagaggtgacagccaggagtttccgggtgtcgtggacccacgcccca
gggacggtggagaagtaccgggtggtgtactaccctgccagcgggggccagcccgaggag
aaggtagtgcagggcacagtggacacagtggtgctcaactacctcctctccctgactgag
taccaggtggccgtgttcgccatctacgccagctcagctagcgaggccctccgaggcagc
gctaccacattggccctgcccacggtgaacaacctggagctgtttgacatcacccacaac
accatgagggcccgctggagggtcgcagagggggcttctggcttcatgatcctctatgcc
ccgctgaccgagggagacgacgctgatgagaaggaggtgaaagtggctgagacggtgaac
gaagtggaactggagaacctgaccccagacacagagtacacagtgacggtgtacgccatg
tacggagaggaggccagtgaccctatgaccagtcaggagaccacactacccctgaccccg
gcgcggaacctgcgcttctccaacgtcgaccacagctctgccagactcacctgggaggcg
acgtccaagaaggccagtggttaccgcatcatgtacgtcaagaccaatggagtgcagacc
aatgagatggacgttggccatatcaccaccctgttgctaaggaacctgacgtcattgacc
gagtacacggtggccatctttgctatctatgacgagggccaggcagagcccttgactgac
agcttcactactaagacggtcccagagcctctgaacctgaggagcagtgaagtctccaca
gaaagcttcagggtcacctgggaacactcagcccaagatgtggttctttacagactcaca
tggacccccatcagaggaggagacactaaagagatgctagtgaacggtaaaatgaatagc
cacctgctgactggactgaggcccattactgagtacgaggtctctctgattgctgtcttc
agaaacgaggaagaaagcaacgctttgaccctcacagagtcaacagtggcaagaacaacg
actaccacaaaagctactactaccacaactaccacacaagctaccaccacagcagttgtg
cgtctgggtgtgaggaacctcctgctcagcgatcacaccaccttcagcatggaggtgtcc
tgggagctgcaggaccgcaacgtgcgtcagtaccgcgtcacctatgtcaccgccaggggc
gatcgtgccgaggagacgaaaatggtcccaggtggtcagaacagcctcctgctgcagcca
ctgctgtctgacatggagtacaaggtgacgatcaccccggtctacgccaacggagacggc
cccggtgttagccgcatgggacgcaccttgccactgtctgctcctaggaacctgagagtg
tcggaggaatggtacaaccgcttccgtatcacctgggacacacccccatcccccactatg
ggctatagagtcgtctacaaacccatctctgctccggggcctgctttggagacctttgtg
ggcgaggacgtgaacaccatgctgatcctgaacctgatgagcggtactgagtacggcgtc
agggtcatcgcctcctacactaccggctccagcgagaccctcaccggcaaggccaggaca
ttgtaccttggagtgaccaatctgaacacctaccaggtgaggatgaccagcgtgtgtgcc
cagtggggtgcccaccgccacgccactctgtaccgtgtggtcatcgagtcgctgctcaat
ggatataagcaggaggcaagactgggaggaggaaccacccggcactgcttcaatgacctg
acagctaacacgcagtacaagatcagtgtgtacgcccaactccaggatacagagggacct
gcagtctccaccacagagaagaccttccctgttcccaccccggcacccaccagaccaccc
accacgaccgctcctcccagtataccctcagtcaaggaagtttgcaaggcggccaaggca
gacctggcatttctagtggacggctcctggagcatcggggatgacaacttcctgaaaatc
atccgcttcctgtacagcaccacaggagccctcgacattattggaccagatggtactcag
gtgtccattgtccagttcagtgacgatgccagaaccgagttcaaacttaactcgtacgac
aataaggagaggctgctagaggccattaaccgcatctcctataagggagggaacaccaag
acagggctagccatccggcatgtgaaagacaccatcttcacagtgggaggaggtgtccgg
aggggcatccccaaagtactggtggtgttgactgacgggcgctctcaggatgatgtcaac
aaggtctccaaagagatgcagatggaagggtacattgtttttgccattggttttgcggat
gcggactacggggagctggtgagcatcgccagcaagcccagcgagagacacgttttcttt
gtggatgatttagacgccttcaagaaaattgaggaaaagctggtcacttttgtttgtgag
gctgccactgccacttgtccttcagtggcgatgagtggcagtaccttgccaggtttcagg
atgatggagatgtttggcctggtggagggtctgtatggacatgtatcaggagtgtccatg
gagcctggcaccttcaacagcttcccctgcttccgcctgcacaacaactccctccttgcc
cagcccaccaagtttatccaccccgagggtttgccctctgattacaccatcactatgctg
ttccgcctgctgcctgaaacgcccaaggagccctttgcattgtgggagatcctcaacaag
gacaacgagcccttggtgggcgtcatcctggacaacggtggcaagaccctcaccttcttc
aaccatgactacaaaggacagtttcagactgtgaccttcgagggacctgagatcaagaag
ctcttctacggcagtttccacaagctgcacatggctattagcaagaccagcgccaaggct
gtcattgactgtaagctagtaggggagaaggccatcaacgcggcgggcaacatcaccacg
gatggcctggaggtgctgggacgcatggtgcgctccagggggaagaaggacagctctgca
ccgttccaactgcagtcgtttgacatcgtctgcagcacgtcctgggccagccgagacaag
tgctgtgagcttcctggtttgaggaaggaggaggactgtcctgccatgccgagggcctgc
acctgcagccaggaaagcaaaggtccccctggccccactggaccccctggaggacctggg
atcagaggagggagaggggaccgtggagaaccaggagctgtgggaccgataggtccagtt
ggggacgctggttctcctgggctgcaggggcctcctggaccccagggacccagcggacgt
accatcatgggccctccgggtggtccaggagaaagaggtgagaagggtgcagctggcgct
ccaggaatacagggcattcctggatctcctgggtcatcaggtcgagtgggacaaacagga
acaaggggacttcctggtaaagatggaccccaggggcgaacaggacctccagggactata
ggcactccaggagctcctgggtcaccagggtcaagtggacctccagggtcactgggaaac
cagggacctcctggtcccgccggaaacaaaggagagaagggagaaagaggtgacctgcaa
tcccaggcatcggtccaagcaatcgcccggcaggtctgtgagcaactgatacagagtcac
atggctcgctacagctccatccttaaccacatccccagcgcacccgtctccgtccgcacc
gttccaggtcccccaggagagcctgggcggcagggcggcccaggaccacagggagagcag
gggcccccgggcagaccagggttccccgggtccaacggagaaaatggacaagcaggagcc
agaggtttgtcaggagagaagggtgacaagggaagcccaggcgcaggagtccagggtccc
agaggccctgtcgggcccccaggaccaacgggtcagggccggacaggtagccagggtcca
tctggtcggccggggaaccctggaacccctgggcggccgggtatccctggaccagtgggg
tcggctggacctcctggatactgtgaccagaactcctgtgtgggctacaacgtaggagag
ggtggcatcggtggtgacacatctgaccgtcacaatcttcccttagtccaattgcccccc
aacacctaccagaactatgacgaggtggaggaggaggacccctataggtatggtgagggg
ggatacccctccgagtactatcagcccaactacccggcgcctcgaccggtcgtgcccgag
gacccaagcatcacccagggcgacgaggtgctgaggtcccccgggatccaccgctcccac
aggagcctggctgacaagaatgataagaaagaagaagaggggccggggccggggagagga
agatggttgtcccatgagggagaacaagctaaggagagccttgcggaagtcggggataca
cgacaggagttgggactgttcagttggagggggaaatatccaaaggggggtctaaggact
atcataaagtgcctgatgtcaatgtcaaatggacatataggaggggaagggtag
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integrated database retrieval system
