Oncorhynchus masou masou (cherry salmon): 135549952
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Entry
135549952 CDS
T10723
Name
(RefSeq) tenascin-X
KO
K06252
tenascin
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04510
Focal adhesion
omm04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135549952
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135549952
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
omm00536
]
135549952
Glycosaminoglycan binding proteins [BR:
omm00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
135549952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_TEN
Fibrinogen_C
EGF_Teneurin
fn3
EGF_2
EGF_Tenascin
hEGF
Ig_DSCAM-DSCAML_C
EGF
EGF_PEAR1L
EGF_integrin
Big_5
Ig_J
Motif
Other DBs
NCBI-GeneID:
135549952
NCBI-ProteinID:
XP_064836428
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All DBs
Position
12:complement(35968531..35996018)
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AA seq
1142 aa
AA seq
DB search
MPLVPSFLILLLTCPALLTPSASQSLQPGGQRAPRDTKPEGGGQPIKVVISEACVQGDSS
QTQGKELDLEPGSALVLTHRIRLVPGSCAGGCEAEFAALRDRLERLEKEVSSLREKCGGP
EGGCCTSQQSKGAECSIKPEGDECPNECSDQGRCEDGKCVCFPGFSGPDCSLSDCPGNCN
DKGKCVSGQCVCDPGFMGPDCSSESCPGNCNNKGRCVNGQCVCDSGFTGPDCSSESCPGN
CNNKGRCVNGQCVCDSGFTGPDCSSESCPGNCNNKGRCVNGQCVCDSGFTGPDCSSESCP
GNCNNKGRCVNGQCVCDSGFTGPDCSTKACPGNCKNGGKCVNGKCVCDSSFTGPDCSTKS
CPGNCSNRGKCVNGQCVCDSGFTGPDCSAKACPNNCSNKGRCVNGKCVCEVGFSGQDCAA
KGCPNNCSNKGRCVKGRCVCRRGFAPPDCSQCEAGFTGADCGTAMSGVSQLNTKDITESS
VTLYWTPPPVQYDTYHVTFTSQKEGDQQITSQVGGKLTTYTQTGLAAGQEYTVTIKGEIN
RRMGTESTVEFTTLISGPTNLQVVKTTTTSAVVQWEQSQGHVDRYRLTVAPNQTDGTAKG
RQDLTLPPERDSAQIDGLDPGHLYDITLVAEKGGIKSKPATVQVTPGPEPPSGLVFSEVT
ETSFSVSWTKPKGPVSGFKVTYTNTQEGEPLSATVDSGDSTLALSKLSPGSSYEVSVISV
LGLDESDAIKDLVMTLPDPPRDLRAINVTDTKALLLWRPALATVDRYVIVYGSEKGSDDA
KITVSGNAAEQQLKGLQGSTRYTVTVTSQLGHLDSSAAITVFTTTGGSRGDGEVPSDLKA
SQVTPRSALLTWKAPSAAVGSYKLTYQTEGQELQEVTIDSTVTEFKLTRLHPMSKYTVHL
QGERGGSYTATISTEFTTGNLRYPFPSDCSQELLNGIHESGEVEIFPRGRQGKPVLVYCD
QVTDGGGWTVFQRRMDGKTDFFRGWKNYSKGFGELSGEFWLGNENLHNLTSMAPMTLRVD
LRAGDESVFAKYSAFTVDTVRRNYALKVSGYSGTAGDSMSYHNARMFSTRDRDPTPFITR
CAMSYRGGWWYKNCHEANLNGLYDTSVNHQGVIWTAWKGKDLSIPFTEMKLRPTSFTPPT
QG
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttgtcccatccttcctcatcctgctcctcacctgccctgccctcctgacccca
tcagcttcccagagcctgcagcctgggggtcaaagggcacccagggacacaaagccagag
ggtggcgggcagccaatcaaagtagtgatctctgaggcgtgtgttcagggggactccagt
cagacccagggcaaggaactggaccttgagcctggttctgctctagtccttacccatcgg
atccgactggttccggggtcgtgtgcaggcgggtgcgaggccgagtttgctgccctgcga
gaccgtctggagaggctggagaaggaggtgtcatcattgagggagaagtgtggaggccca
gaggggggctgctgcacgtcccagcagagtaaaggtgcagagtgttccatcaagccggag
ggagacgagtgtcctaatgagtgcagtgaccagggacgctgtgaagacggcaagtgtgtc
tgcttcccagggttcagtgggcccgactgcagtttgtctgactgccccggcaactgcaat
gacaaggggaagtgtgtgagcggccagtgtgtgtgcgacccaggtttcatggggccagac
tgctcttcagagtcctgtcctggaaactgtaacaacaaggggcgatgtgtgaacgggcag
tgtgtgtgcgactcaggtttcacggggccagactgctcttcagagtcctgtcctggaaac
tgtaacaacaaggggcgatgtgtgaacgggcagtgtgtgtgcgactcaggtttcacgggg
ccagactgctcttcagagtcctgtcctggaaactgtaacaacaaggggcgatgtgtgaac
gggcagtgtgtgtgcgactcaggtttcacagggccagactgctcttcagagtcctgtcct
ggaaactgtaacaacaaggggcgatgtgtgaacgggcagtgtgtgtgcgactcaggtttc
acagggccagactgctccaccaaggcatgtcctggaaactgcaaaaacggggggaaatgt
gtgaacggtaagtgtgtgtgtgatagcagttttacaggcccagactgctccaccaagtcc
tgccctggcaactgcagcaaccgtggaaagtgtgtcaacggccaatgtgtctgcgatagc
ggctttacggggccggactgttccgccaaagcatgtcccaataactgcagcaacaaggga
aggtgcgtgaacgggaagtgcgtgtgtgaagtgggcttcagcggacaggactgcgccgct
aagggctgtcccaataactgcagcaacaaagggcgctgcgtgaaggggaggtgtgtgtgt
cgccgtggtttcgcccccccggactgcagccagtgtgaagctgggttcactggagctgac
tgtggcaccgccatgtctggtgtgtcccagctcaacaccaaggacatcactgaatcctct
gttactctctactggacaccacctccagtccagtatgacacctaccacgtcaccttcacc
agccagaaagagggcgatcaacagataacatctcaagttggagggaagctcacgacctac
acccaaacaggactggcggccgggcaggagtacacggtgacaatcaagggagaaataaat
aggagaatgggcactgagagcacagtagaattcacaacccttatctctggacccacaaac
cttcaagttgtgaagacaaccacaacatctgcagttgtccaatgggaacaatcgcaagga
cacgtcgacaggtatcgcttaactgttgcacccaatcagacagacggaacagccaaggga
agacaagacctgaccctgccccctgagagggactctgcccagattgacggtttggacccg
ggacatttgtatgacatcacactagtggctgaaaagggcgggatcaagagcaagccagca
acagtccaagtcactcctggtccagagcctccctcaggtcttgtcttcagtgaagtgact
gagacgtctttctctgtgtcctggaccaagccaaaaggtcccgtgagtggcttcaaggtc
acctacactaacacacaggaaggggagcctctctccgcaacggtggactctggggattcc
actctggcactgtcaaagctctctccagggtcctcctatgaggtcagtgtgatatccgtc
cttggactggacgagagcgatgcaatcaaagacctggttatgacactccctgaccctccg
agggatctccgggccattaatgtcacagacaccaaggccttgctgctatggcgaccagca
ctggcaacagtcgaccgttacgtcatagtttatggctctgaaaaagggtcagatgatgcc
aagatcactgtatcgggcaatgcggcggagcagcagctgaaaggcctacagggctccact
aggtacaccgtcacagtcaccagtcagctgggccacctggacagctctgccgccatcacc
gtcttcaccaccaccggtggatccaggggagacggggaagttccgagtgacctgaaggcc
agtcaggtgactcctcgctcagcgctgttgacgtggaaagcaccctctgccgccgtggga
agctacaagctgacctatcaaacggagggacaggagttgcaggaggttaccattgactcc
acagtaacagagttcaaattgaccaggctgcatcccatgtccaagtacaccgtgcatcta
cagggggagaggggagggagctatactgctacaatttccactgagttcaccacagggaat
ctccgataccccttcccaagtgactgttcccaggagctgctaaacgggatacacgagtct
ggagaggtggagatcttccccaggggaaggcaggggaaaccagtgttggtctactgcgac
caggtgactgatggaggtggctggacggttttccagagaaggatggatgggaaaacggac
ttcttcagaggctggaaaaactacagcaaaggttttggagaactgagtggggaattttgg
ctgggtaatgagaacctacacaatctaaccagcatggcaccaatgaccctacgtgtggac
ctccgtgcaggggacgaatcagtgtttgccaagtactctgcattcacagtggacactgtt
agaaggaactatgctctcaaagtgtctgggtacagcggtacagcaggtgactctatgagt
taccacaacgcgcgcatgttctctaccagagacagagaccccacgcctttcatcacccgc
tgcgccatgtcctatagggggggttggtggtacaagaactgccacgaggccaaccttaat
ggcctctacgacaccagtgtcaatcaccagggtgtgatctggactgcctggaaaggcaag
gacttgtccatccctttcaccgagatgaagctccgaccaacatctttcacccctccaact
cagggataa
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