Oncorhynchus masou masou (cherry salmon): 135549958
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Entry
135549958 CDS
T10723
Name
(RefSeq) E3 ubiquitin-protein ligase RING2-A-like
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
135549958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omm04121
]
135549958
03036 Chromosome and associated proteins [BR:
omm03036
]
135549958
Enzymes [BR:
omm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135549958
Ubiquitin system [BR:
omm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135549958
Chromosome and associated proteins [BR:
omm03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
135549958
Noncanonical PRC1 (PRC1.1)
135549958
Noncanonical PRC1 (PRC1.3/1.5)
135549958
Noncanonical PRC1 (PRC1.6)
135549958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-Nse
zf-C3HC4_4
zf-RING_6
zf-RING_4
zf-RING_5
RING_XB3-XBAT31
zf-rbx1
zf-UDP
TRAF3_RING
zf-C3HC4_5
Zn_ribbon_Top1
Sina_RING
Motif
Other DBs
NCBI-GeneID:
135549958
NCBI-ProteinID:
XP_064836435
LinkDB
All DBs
Position
12:complement(36088223..36092322)
Genome browser
AA seq
381 aa
AA seq
DB search
MVTPVNIQNPSKTWELSLYELHRSPQEAIMDSTEIAVSPRSLHSELMCPICLDMLKNTMT
TKECLHRFCSDCIVTALRSGNKECPTCRKKLVSRRSLRRDSNFDALISKIYPSRDEYEAH
QDRVLERLNRLHNNRILSSSIEEGLRMQALHRAQRVRKPAQESDNTTFSGGEDNGDTRSH
LSHDSAPSHVHLPPSHTPPEAGHTQNPKRPRESDGSVPEVDGGSLAPPVRRNKESPGSEI
ELVFRPHPLLVNTQDYSQTRYVKTTANATVDHLSKYLALRIALEDRQRDSQSDAGTEKEG
GAKGGEAAAEGASLKNISEKQYTIYIPTSGGQFSTLNGSLTLELVNEKYWKVRKPLELYY
APTKDQQPQPSQPKSPQPKEA
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggtgactccagtcaacatccaaaaccccagtaagacgtgggagctgagcttgtatgag
ctgcacaggagcccacaggaggcgatcatggacagcacagagatagcagtgtcccccagg
agcctccacagtgagctgatgtgccccatctgtctggacatgctgaagaacaccatgacc
accaaggagtgcctgcaccgcttctgctccgactgcatcgtcactgcactccgatcaggg
aacaaggaatgccccacgtgccgaaagaagctggtgtcgagacgctcattgcgccgggac
tccaacttcgacgccctcatctcaaagatctaccccagccgggacgagtacgaggcccac
caggatcgggtgctggagagactcaaccgactgcacaacaatcggatactcagctccagc
atcgaggaggggctacgcatgcaggcacttcacagagcccagcgagtgcgcaaaccggcg
caggagagtgacaacacaaccttcagtggtggcgaggacaacggggacacacggtcacac
ctctcccacgactcagctccctcccatgtgcacctccccccaagccacaccccccctgag
gccgggcacacccagaaccccaagcggcccagagaatcggacgggtcggtcccggaggtg
gatgggggcagcctcgcgccaccagtccgccgcaacaaagagagccccggctccgagatt
gagctggtgttccgcccacatcccctgctggttaacacacaggactacagccagaccaga
tatgtgaagaccacagccaatgcaacagtggaccacctgtctaaatacctggctctgcgt
atcgctctggaggacagacaaagagacagccaatcagatgcagggacagagaaagagggg
ggtgctaaaggaggggaagcagcagcagaaggggccagcctgaagaatatcagtgagaaa
caatacaccatctacattcccacatcagggggccagttctctactctcaacggctcccta
actctggagctggtaaatgagaagtactggaaggtcagaaagcctctggagctctactat
gcccccaccaaggaccaacagcctcaaccatcacagccaaagtccccacagcccaaagag
gcgtga
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