Oncorhynchus masou masou (cherry salmon): 135549987
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Entry
135549987 CDS
T10723
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135549987
Transcription factors [BR:
omm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
135549987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
135549987
NCBI-ProteinID:
XP_064836476
LinkDB
All DBs
Position
12:36845925..36880677
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AA seq
2566 aa
AA seq
DB search
MKPIKKQGRRSPPSTRAKGGKRRGAVDSGEKRDSDENRDQFPKSQTPPQTSSHSELSQEE
SMTLTARATPEREVHREGPQLPETAAAAAGSLPGKSEDSRPGSVKSLSAHSTDSSSSAAS
AANSPNPSSNRKTATFKARVPKKKYTSEHCAAAAAAASNHGYHGNPGTPPLNSSSAHCGS
NTGSQSSGLSSGPGLTASEGGLLTDINSQTRRPVEDYITTIAPPQDRNNIPGPPPTGDRD
RRGPEGGREISPSPVRCSSTDTASEHDPDVSDLRRPNFPHTNPNTEAHTLDLVQRSTPHT
PTPQSLSDALADALAKGLKNQRVLARQARRRTGKWEEENGRGVGRESMDSVFRAGVVRRV
SGEHGSLEVQLNGEKELYRYPFREGPQGPVDIIMDAPPPGSQAVPIGTPVCVPFGGNEDG
GTTETQRQWYREGLVTQVDSHPAVSYPYRVLLEDRAPPGDEEGDGRVGTPTAVWVSRQSL
RLLVPPWDLDLGPSGGGREEGDAAAERGREREREREDRDEIEVEPELCFLSHGMGLSAAV
AGSVLGRLSYPGTAPASSSSSTVSSPVTPASVLSLVPGRDWEREKDLVERERELQRKQER
ENRERAKQHHHFMPLTPEEDIEVSQFSMVPMGAAGGAAKALAVSQHRHILSKPPPGYLSP
HLSVVRGLGGTPLVGPHLALNPHPPASPTVLMGLESGALSAGMAAIATPQLPLPSSSSRG
SLDKPPSSNTNSHGASGGGGGSGSASSSRSRTPLTVAQQKYKKGDVVCTPTGIRKKFNGK
QWRRLCSREGCSKESQRRGYCSRHLSMRTKEMEASGGGRDRGGASSTGTLTPSDLRLGGG
RTSSEFDWDNTSRDSSEASSRGGDSRPRMVLPSFLPQDLSHFDFDECEAATMLVSLGSSR
SGTPSFSPISNQSPFSPTPSPSPSPLLSFRPATFSPITAPPSLTPRRHRHLSGTKMSTPG
SEREHHLSGIVPTFQTNLTFTVPMSPSKRKLDALPPPLPLPDQPLGETIGLRPAAFRVLS
PQSQPTTPSSLSFPRPRSATSRPPSSAASTPPPMLVSPTPPSPLPQDPSPRRIVPLRDSP
VIVRNPDVPLAKFTEGPLGRRGGGGCSSRDHSQPLHLATGLQAPVPINGAVTNGAVLMRN
PASTLVLVTSSQSLTPAVTGRPVHSSPSPSGGSASMSSTGSALSNSGSGGREWERKSGGH
QDTIGGTLPQPVACHPSPTALLPLILPAESPQPAPRKDIIMGRPGTVWTNVEPRSVPVFP
WHSLVPFLEPSQSSAAAQPTDGQQLVNQSNEPRCGVALVSDGRMGPPDAGPGSPSRPPPS
SNDNNPQAERAERGGADSETESDADDPFFPGVANDPAPSTGTMKRRTQSLSALPKDGDRK
REKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPQEKQKYHDLAF
QVKEAHFRAHPDWKWCNKDRRKSISEGRGTPGAKEARERSMSESAEPESVSQGMELKGTA
GPGWPGGSEYHLGDDSGQLPRTRAFSYSAVHSLERRERARDVEKLCLEETGSFHSHPPTL
SLAQCGASEDVTSDEERMVICEEEGDDDVMEDSCPEGSIDLKCKERVTDSDEDEPDRQQA
FQPVVCSSLPSSTNTSHADSHSESTKGDTRGSAGESSERKRKRGMEGGEEGSGESKRGRG
GGGHVPSNSIPGSAPITSTPALGYGLTQVLGAVRMAPTVVTNMVCPITSMPIPIASKPME
GSIALSALPGEKKAMLLIGGPGAGGGPFTAGGGYLSSSSSNLVSVGPGGLQVTSLVLGGA
FPNQSIQLIAPPQPLLSSTHSTLPFPLPLLQPQFLPAGSLTPPGGANPGLTQGQYILPTL
SSVSANPKTPSPQLTQQPTGVRTLPSTPPTHDSLANGIHSGAGVEIRYATVGGVSPGERV
QAQSPVLQSKMLVPMATVRTGSTPPQPSCLVAPPLPVQNGALPGSKIIQIAPMPMVQTNV
HSAGAVLSGSPFPVSMATATVMTSGITPAQTVLLTSPPTRITYVQSGTGGVSTATVQAPP
SSGPAYLPSSLTTLGFTAIAPAGQALVHPLVAGQPPWLTPALSTGAPGTGRQLLTAIYPD
QNITLVPDGVSMTSVPPNLAQEVSGQSSRSAVGVQSSKDVTLSHEEGMPHLTAEMEHKPQ
VEGQAQRKTKIQIKKESIKKEKMTEDVEAHSKPGANSMGTSSSNTPTGSEENGGRASHVK
EENTDDARDYAKEKQTDVDGERERWIKMECGTPEPERSRETDDWPHEGHNKGDSGNEGHS
KGAGPREPTHPPTGQDTPPPAPQTDRDAPPSAKKTKFRPPPLRKPSDSIDKVLSGSYFEE
RFAELPEFRPEEVLPSPTLQSLATSPRAILGSYRKKRRNSTDLDSSAEDPSSPRRKTAAR
SRLSSCSSEPNTPKSDVKCEGDIFTFDRAVAESEDVLGEIDRVPYSSLRRTLDQRRALVM
QLFQEHGFFPSAQATAAFQARYSDTFPSKGCLQLKIREVRQKIMQTATPGTPGISEPGGS
TTGVPGSTDSTSAANGSSNTNTRDGTGTEPGERGRSPEEPRSLGKL
NT seq
7701 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgattaaaaagcaaggaaggcgctcgcccccgtcgacccgggccaaaggtggg
aagagacggggggcggtggacagtggggagaaaagagactcggacgagaacagagaccaa
ttccctaaaagtcagaccccaccccaaacctcatctcactcagagctttctcaggaagag
tcgatgacacttacggctagggccacgccagagagggaggtccacagagaggggccccag
ctcccagagacagcggccgcagcagcagggtccctccctgggaagtcagaggactcccgc
ccggggagtgtcaagtcgctgagcgcccacagcacagacagcagcagcagcgctgccagt
gctgccaacagccccaacccctcgtccaaccgcaagacagccaccttcaaggcccgcgtc
cccaagaagaagtacacctctgagcactgtgctgctgcagctgctgccgccagcaaccac
ggataccatggcaaccccggcacgcccccactgaacagcagtagtgctcactgtggtagt
aacaccggtagtcagtcgtcgggcttatcttcggggcccgggttgacggcgagtgagggc
ggtttgcttactgacatcaacagtcagaccaggagaccagtggaggactacattaccact
atagctccaccacaggacaggaataacatacctggacctcctcccacaggggacagagac
aggagaggcccagagggaggcagagaaatctcccccagccctgtccgctgctcctctaca
gacacagccagcgaacacgaccctgacgtgagcgatctacgccgccccaactttccccac
accaatcccaacaccgaagcacacacactggacctggtgcaacgtagcaccccacacact
ccgaccccacagagcctgtcggacgcgctagccgacgccctggcaaaaggtctaaagaac
cagcgggtgctagccaggcaggctaggaggagaactggaaagtgggaagaggagaacgga
aggggagtggggagggagagcatggactcggtgttccgagcgggtgtggtgcggcgggtg
agcggcgagcacggcagcctggaggtgcagctgaacggcgagaaggagctgtaccgctac
ccgtttcgcgagggcccccaggggcccgtggacatcatcatggatgccccgccgcccggc
tcgcaggccgtgcccatcggcacccctgtgtgcgtgcccttcggaggcaacgaggacggc
ggcaccacagagacccagcgccagtggtaccgagagggcctggtcacccaggtggactcc
cacccggctgtgtcctacccctatagagtgttgttagaggacagagcgcccccaggggat
gaggagggggatggcagggtgggcactccgaccgctgtgtgggtgtcccgtcagagcctc
cgcctgctggtgcccccctgggacctggacctgggaccctccggaggggggcgagaggag
ggcgatgctgccgccgagagggggagagagagggagagagagagagaggacagggacgaa
atagaagtggagccagagctgtgtttcctcagccacgggatggggctcagcgcagctgtg
gctgggtctgtgttggggaggctttcataccctggaacggccccagcttcctcgtcttcc
tccactgtcagctcccctgtcacccctgcctcggtgctgagtctggtgcccggaagagac
tgggagcgagagaaggacctggtggagagagagcgggagctccagaggaaacaagagaga
gaaaaccgagagagggccaagcagcatcaccacttcatgcccctgaccccagaggaggac
atagaggtgtcccagttcagcatggtgcccatgggggcggcgggaggtgcggccaaggcc
ctggcggtgtcccaacacaggcacatactctccaagccacccccgggctacctcagcccc
cacctgtccgtggtccggggcctcggaggcaccccgctggtgggcccccacttggccctc
aacccccacccccctgcctcccccacagtgctaatgggcctggagtcgggagccctgtca
gcggggatggccgccatcgccacccctcagctgcctctgccctcctcatcctcccgcggc
tccctggataagccaccctcgtcaaacaccaactcccacggtgcatctggagggggtgga
ggctcgggttcggcgtcctcgtcgcgctcccgcacccctctcacggtggcccagcagaag
tacaagaagggcgacgtggtgtgtacccccacgggcatccgcaagaagttcaacggcaag
cagtggaggaggctttgctccagagagggctgctctaaggagtcccagagaagaggctac
tgctcgcgtcatctctccatgagaactaaagagatggaggccagcggagggggcagagac
cgtggcggggccagcagtacgggcaccctaaccccgtcagacctgaggctaggcggtggc
cggaccagttcggagttcgactgggacaacacgtcgcgagacagcagcgaagcgagcagt
agggggggggattcacgcccccgcatggtcctgccctcgttcctgccccaggacctatca
cacttcgactttgatgagtgcgaggcggccaccatgctggtgtctctgggcagctcccgc
tcgggcacgccctccttctctcccatctccaaccaatcgcccttctcgcccacgccgtcg
ccctcgccatccccgctcctcagcttccgcccggccaccttcagtcccatcacagccccg
ccttctctcacccctcgccgccaccgccatctgagcgggactaagatgagcacaccgggc
tcggagcgcgagcaccacctgtcgggcatcgtacccaccttccagaccaacctcaccttc
accgtgcccatgagccccagcaagcggaaactggatgcccttcctccgccactgcccctc
cccgaccagccactaggggagactatagggctccggccagccgccttcagggtgctctcc
cctcagagccagcccaccaccccctcctcgctctccttcccccggccccggagcgccaca
agccgccccccgtcctccgccgcctccacccctccacccatgctggtgtcccccacccct
ccctccccactgccccaggaccccagcccccgccgcatcgtgcccctgcgagactccccc
gtcatcgtgaggaaccccgacgtccccctggccaagtttacagagggacccttagggagg
aggggaggagggggctgctcctcaagagatcacagccagcccctgcatcttgccaccggc
ctccaagcacccgtgcccatcaacggcgccgtcaccaatggagcggtcctcatgcgaaac
cccgcctccaccctggtccttgtaacctcctcccagtccctgaccccagccgtcacggga
cgccctgtccactccagcccatcccccagtggtggctccgcctcaatgtcctctactggc
tccgccctctctaactctggatcaggcggtagggagtgggagaggaagtctggagggcat
caggacaccattggagggacactgccccagccggtagcctgccacccctcacccactgcc
ctgctgcccctcatcctaccagccgagtcccctcaacctgcaccccgcaaggacatcatc
atgggacggcccgggacagtatggaccaatgtggagccccggtcagtgccagtgtttcct
tggcattcattggtccctttcctggagcccagccaatcgagtgcggctgcccagcccact
gatggccaacagcttgtcaatcagagcaacgagcctcgttgtggggtggccctagtgagt
gacggacggatgggcccaccagatgcaggaccagggtctccatcccgcccaccgccctcc
tccaatgacaacaacccccaagctgaaagagcagaaagaggcggagccgacagcgagacg
gagagcgatgcagatgacccgttctttccgggtgtagcaaatgatcctgccccgtctaca
ggcactatgaagaggcggactcagtccctcagtgctcttccaaaagatggagacagaaag
agggaaaaggaccacattcggcggccaatgaacgcattcatgatctttagcaagcgtcac
cgggcgctggtgcaccagaggcaccccaaccaggacaaccgcacggtcagcaagatcctg
ggcgagtggtggtacgccctggggccacaagagaagcagaagtaccacgacctcgccttc
caggtgaaggaggctcacttcagggcccacccagactggaagtggtgcaacaaggacagg
aggaagtctatctctgagggccgagggaccccgggggccaaagaggcacgcgagaggagc
atgtcggagagcgcagagcccgagtcagtgtctcagggcatggagttgaagggtacggca
ggcccgggctggcctgggggttctgagtatcatctgggggacgacagtggccagctccct
cgcacccgtgccttctcctatagtgcagtacacagcctggagaggagggagcgggccaga
gatgtggagaagttgtgcctagaagagaccggctcgttccacagccacccccctactctc
tccctggcacagtgtggggccagcgaggacgtgaccagcgacgaggagcgcatggttatc
tgtgaggaagagggggacgatgatgtcatggaggactcgtgccctgaaggatccatagac
ctcaagtgtaaagagagagtgactgacagtgacgaggatgagccggatagacagcaagcc
ttccagccagtggtctgttcctctctcccctcctccaccaacacctcccacgctgactcc
cactccgaatctaccaagggggacacaagggggagcgccggagagagctctgagaggaag
agaaaacgagggatggagggaggagaagagggaagtggagaatccaaaagaggaaggggt
ggaggggggcacgttccttctaattccatccctggatcggcgcccatcacctcgacccct
gctctgggttatggactcacccaggtgctcggtgcagtccggatggcccccaccgtggtg
accaacatggtatgccccatcaccagcatgcccatccccatcgccagcaagccaatggaa
ggctccattgccctcagtgccctgcctggggagaagaaagccatgcttctgattggagga
ccgggagcaggaggcgggcctttcacagcagggggtgggtacttgtcctcgtcctcttca
aatctcgtgagtgtggggccgggggggctgcaagtcaccagtctagtgctgggaggtgct
ttccccaaccagtctatacagcttatagccccgcctcagcctctcttaagctccacccac
agcaccctacctttccccctccccctgctgcagccccagttccttcctgccggttctctc
accccccctggcggtgccaaccctggcctcacccaggggcagtatatcctgcccaccctg
tcatctgtcagcgccaaccccaagaccccctccccccagctaacccagcagccaaccggc
gtccgcacgctgccctccactccgcccacacatgactccctggccaatggaatacattcg
ggggcaggagtggaaataagatatgccacagtgggaggggtcagccctggagaaagagtc
caagcccagtctccagtcttgcagagcaagatgttggttcccatggcaacagtgagaact
ggctctactcctcctcagcccagctgcctggtggctcctccccttcctgtgcaaaatggt
gctctaccaggaagcaagattatccagatcgcccccatgccgatggtccagacaaatgtc
cactctgctggagcagtgctttctgggagtcccttccctgtatccatggcaacagccact
gtgatgacttcgggcatcacacccgctcagaccgtgttgctaacctcgcctccaacaagg
atcacttatgtccaatcaggcaccggaggggtctccacggcaacagtccaggcccctccc
tcttcaggccccgcctacctgccatcgtccctgactaccctgggctttaccgccatcgcg
ccggctggccaagcccttgtgcaccctctcgtagcgggccaaccaccctggctcacccca
gcactttccactggagccccggggactggacgtcaactcctcaccgccatttacccggac
cagaacatcaccctggtgccagatggggtttccatgacctctgtgccccccaatttggct
caagaagtgtccggccaatcatcacgctcagctgtcggcgtccagagttcaaaggacgta
accctgtcacatgaagagggaatgccacacctgactgcagagatggagcacaagccacag
gtggagggccaggcccaaaggaagaccaagatacagataaagaaagagagcataaagaaa
gaaaagatgacagaggatgtcgaggcacatagcaaacccggtgctaactcaatgggtacg
tccagcagcaacacaccaacagggagtgaagaaaatggtggtcgagccagccacgtgaaa
gaagagaacacggacgatgccagagattatgccaaagagaaacagacagacgtggatgga
gagagggagaggtggataaagatggaatgtgggacacctgaaccagagaggtccagggag
acagatgattggccccatgagggccacaacaaaggggacagtggcaacgagggccacagc
aaaggggctggaccaagggaacctacccaccctcccacaggacaggacactcctccgcct
gccccacagactgacagggacgcgcccccctcagccaagaagaccaaattccgccctccg
ccactcagaaagccctccgactccattgacaaggtcctgtcggggtcctatttcgaggag
cgctttgccgagctgccagagttcagaccagaagaggtgctgccctctcccaccctccag
agtctggccacttccccccgagccatactgggcagctaccggaagaagaggaggaactcc
acagacctggactcgtctgcagaggaccccagctctcccaggaggaagactgcagctcgg
agccgtctctccagctgcagctcggagcccaacacacccaagagcgacgtcaagtgtgag
ggggacatcttcacctttgacagagctgttgctgagtctgaggatgtcttgggggagatt
gacagagtgccgtactcctctctccggaggactctggaccagcgcagggctcttgtcatg
cagctcttccaggaacacgggttcttcccttcagcccaggccactgcagccttccaggcg
cgctattcagacacctttccctctaaggggtgtctgcagctgaagatcagggaagtgagg
cagaagatcatgcagacagccacacctggaacccctggaatctctgagcccggcgggtca
acaacaggggtcccggggtcaacagactccacctccgccgccaacggctcctcaaatact
aacactcgagatggtacagggacagagcccggagaaagagggaggagtcccgaggagcct
aggagtttgggtaaattgtaa
DBGET
integrated database retrieval system
