Oncorhynchus masou masou (cherry salmon): 135550211
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Entry
135550211 CDS
T10723
Name
(RefSeq) transcription factor Sox-19a-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
omm Oncorhynchus masou masou (cherry salmon)
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omm03000
]
135550211
Transcription factors [BR:
omm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
135550211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
HTH_24
Motif
Other DBs
NCBI-GeneID:
135550211
NCBI-ProteinID:
XP_064836884
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All DBs
Position
12:complement(47507969..47510398)
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AA seq
322 aa
AA seq
DB search
MVNMYNIIEHQLKSSVPSHHPGTGMPPANGVGGHEGGHTGSKLPTIQPDPMDKVKRPMNA
FMVWSRGERRKMAQENPKMHNSEISKRLGVAWKSLTDAEKRPFIDEAKRLRAVHMKDYPD
YKYKPRRKTKPMPKNNTLAAQYQMSAGNHLLSASAAQGQVGNPRMDAYGWGHTGGYTAAM
QSEALGYSQQLHRYDLSALQYQSSMAQAQAYMNGANAYSPMSYNSSPQQVSPVMSMVKQQ
SDGHSMSPSPTGPHSPLQQHHHQAHQQHQTQRGIQVQGDHLRDMISMYMPGGDASEAQRG
YSVSAANIQQHYLGGSAPLTHL
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatatgtataacattatagagcaccaactcaagtcctctgttccttcacatcat
cctggaacaggaatgccacctgcgaacggagtaggggggcacgagggcggccacacaggt
tccaaattaccgacaatccaacctgacccaatggacaaagtcaagcggcccatgaatgcc
ttcatggtctggtcacgcggtgagcgacggaaaatggctcaggaaaatcccaaaatgcac
aattctgagatatccaaacggcttggtgtcgcgtggaaatctctaacagacgccgagaaa
aggcccttcattgacgaggctaagcgcctccgcgcggtgcacatgaaggattatccggac
tacaaatacaagccccgtcgtaaaaccaaaccgatgccgaagaacaatactctagctgcc
cagtatcagatgtcggccggtaaccacctgctgagtgcgtccgcggctcagggacaagtt
ggaaaccccagaatggacgcatatggctggggccacacagggggctacactgcggcgatg
cagagcgaggcgctcggctacagccagcagcttcaccgctatgacctgtcagcacttcag
tatcagtccagcatggcccaggcccaagcctacatgaatggtgccaacgcatacagcccc
atgtcctacaacagcagcccccagcaggtcagcccagtgatgtccatggtgaagcagcag
tctgatggccacagcatgtccccatcccccaccgggcctcacagccccctccagcagcac
caccaccaggcccaccagcagcaccagacccagcgtggtatccaggtccagggagaccat
ctcagggacatgatcagcatgtacatgcctgggggagatgcctcagaggcccagagaggg
tactccgtctctgcagcaaacatccagcagcattacctgggtgggtcagctccactcacc
cacctttga
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